NO02G00610, NO02G00610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G00610 vs. NCBI_GenBank
Match: EWM30600.1 (hypothetical protein Naga_100129g17 [Nannochloropsis gaditana]) HSP 1 Score: 464.2 bits (1193), Expect = 2.800e-127 Identity = 205/254 (80.71%), Postives = 230/254 (90.55%), Query Frame = 0 Query: 8 LVFALFGAVGVEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLAILDENEEVKVVLADHIPHNDAAKSSFIERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAGARAFEEFELDSQPLDWPYKNLTMSVYGAEEAEWEGGWLKDVPKRFTHLADFVEC 262 LV AL V+GHARWKCP PRDENDA+GNHI FDNTGNK GPCGP+SGMYGMNGVR LKPGPLT+TWEESIAHVGSPFR+AILDE+E+VKVVLADHIPH+DAAK++F E+ YTPYHLTVDIPDV+CEKCTLQLIYFMTDKTVKCGSL CTY+ +DSACSGQIDA+ PTCFGAPNDVPC ++DTCFSNYHTCTDV+I G R+FEEF++D QP+DWPYKNLTM VYGAEEA WEGGWLKDVP RF +A+F+EC Sbjct: 8 LVCALLAVAEVDGHARWKCPAPRDENDADGNHIPFDNTGNKVGPCGPYSGMYGMNGVRVLKPGPLTLTWEESIAHVGSPFRIAILDEHEKVKVVLADHIPHDDAAKTTFFEQFYTPYHLTVDIPDVQCEKCTLQLIYFMTDKTVKCGSLLCTYYPEDSACSGQIDASEPTCFGAPNDVPCLKEDTCFSNYHTCTDVTIQGTRSFEEFDMDLQPMDWPYKNLTMGVYGAEEAVWEGGWLKDVPARFNTVAEFLEC 261
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_002294131.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88486.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 125.9 bits (315), Expect = 1.800e-25 Identity = 82/219 (37.44%), Postives = 111/219 (50.68%), Query Frame = 0 Query: 21 HARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGM--NGVRALKPGPLTVTWEESIAHVGSPFRLAI-LDENEEVKVVLADHIPHNDAAKSSFIE-RTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKD-TCFSNYHTCT-------DVSIAGARAFEEFE---LDSQPLDWP 225 H+RW CP PR +TG K GPCG + + + + +KPGPL V +EESI H G+PFR+++ D +++ VL DHIPHND + SF + TYTPY +TV+IP+V CE+C+L L MTDK GS P + C + D TCFS YH+CT DV GA + E++ L+S WP Sbjct: 29 HSRWNCPVPRS-----------PSTGIKTGPCGDDINDFTIDSSSIVEIKPGPLRVVFEESITHTGAPFRISLSADGSDDSSCVLLDHIPHNDCCRPSFTDPSTYTPYVITVNIPNVICERCSLHLSNPMTDKIGSDGS--------------------------PTGIGCTDPDGTCFSVYHSCTVPFRIVADVE-NGAVSRSEYQCESLESMNEGWP 209
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_002670751.1 (predicted protein [Naegleria gruberi] >EFC38007.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 104.4 bits (259), Expect = 5.600e-19 Identity = 69/211 (32.70%), Postives = 97/211 (45.97%), Query Frame = 0 Query: 8 LVFALFGAVGVEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLAI---LDENEEVKVVLADHIPHNDAAKSSFIERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAGARAFEEFE 216 L +F V GHARWK P PR ++G K PCG V L+PG + +EE+I+H G+PFR+A+ D N E K +L DHIPHND + SS ++ Y VDIP+++C+KC++ L MTDK C C+Y + S + C S YH+C ++ I G F+ Sbjct: 12 LCIGMFMISSVSGHARWKYPTPRT-----------SDSGLKSYPCGGVEFFGNGQPVTILQPGKQILQFEETISHTGAPFRIALSINSDSNYE-KYILIDHIPHNDQSDSSSLK----VYQYLVDIPNIKCQKCSISLTNPMTDKQSGC----CSYPTTKTGNS----------------------ELCGSVYHSCANIQINGTVELSNFK 180
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_002669694.1 (predicted protein [Naegleria gruberi] >EFC36950.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 100.5 bits (249), Expect = 8.000e-18 Identity = 65/200 (32.50%), Postives = 92/200 (46.00%), Query Frame = 0 Query: 18 VEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLAILDENEE--VKVVLADHIPHNDAAKSSFIERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAGARAFEEFE 216 V+ HARWK P PR ++G K PCG + L+PG T+ +EE+I+H G+PFR+A+ +++ +L DHIPHNDA +SS ++ Y V IPD+ C KC+L L MTDK AA TC P C S YH+C ++ I G ++F+ Sbjct: 23 VDAHARWKYPTPRT-----------SDSGLKSYPCGGIEFFGNGQSITTLQPGKQTLQFEETISHTGAPFRIALSIDSDSNYDSFILIDHIPHNDATESSSLK----IYQYEVTIPDIDCPKCSLALTNPMTDK-----------------------IAAGTCCAYPK--ASSSSPQCGSVYHSCANIVIKGKIPVDQFK 182
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_013755369.1 (hypothetical protein AMSG_12126 [Thecamonas trahens ATCC 50062] >KNC52480.1 hypothetical protein AMSG_12126 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 99.4 bits (246), Expect = 1.800e-17 Identity = 79/256 (30.86%), Postives = 107/256 (41.80%), Query Frame = 0 Query: 5 LSVLVFALFGAVGVEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLA---------ILDENEEVKVVLADHIPHNDAAKSSFIERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACS--GQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAGARAFEEFELD---SQPLDWPYKNLTMSVYGAEEAEWEGGWLK 247 L+ V A+ V V+GH+ W CP PR +TG K PCG ++ PG LTV+W E+I H G+P+R+A ++ + VVLADHIPH D A S Y+ TVDIP+V TLQL+ MTDK + ++CS G +D CFS YH+C +SI G +F + P P + E W GWL+ Sbjct: 9 LAAAVMAM--VVRVDGHSAWLCPKPRS-----------PSTGLKDYPCGRSVFNKWDGPWTSVAPGKLTVSWHETINHNGAPYRIALSLGSGPDGLVGDCTFEDVVLADHIPHWDMASSD------KTYYFTVDIPNVDAPFATLQLLNPMTDKLM------------GTSCSTIGNVD-----------------DPECFSVYHSCASISITGTTPVADFLASYTYTTPPGLPAPPTPNAWSKGESGTWTNGWLQ 216
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_013401471.1 (uncharacterized protein LOC106167285 [Lingula anatina]) HSP 1 Score: 92.4 bits (228), Expect = 2.200e-15 Identity = 70/217 (32.26%), Postives = 96/217 (44.24%), Query Frame = 0 Query: 5 LSVLVFALFGAVGVEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCG--PFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLAILDENEE-VKVVLADHIPHNDAAKSSF-------------IERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSI 206 LSV+V + + +EGH RW CP P+ NTG K GPCG F G G + PGP+TV WEESI H G+P + ++ + ++ +L DHIPHNDA F + + +TV+IPD+ C C L L MTDK + +ACS Q+ C S Y+TCT++ I Sbjct: 7 LSVMVASF---LTIEGHVRWVCPRPQS-----------TNTGIKSGPCGAVDFEG-----GYMDVVPGPMTVRWEESIFHRGAPSSIRLMKKGDDSTDCLLLDHIPHNDAMVVKFPFTDPNCKISGEPLGKCSGVTQVTVNIPDIDCPDCYLLLTSVMTDK-----------YGPTTACS-QLTNGNNNC----------------STYYTCTNIKI 176
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_013396700.1 (uncharacterized protein LOC106163601 [Lingula anatina]) HSP 1 Score: 91.7 bits (226), Expect = 3.700e-15 Identity = 66/204 (32.35%), Postives = 89/204 (43.63%), Query Frame = 0 Query: 18 VEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCG--PFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLAILDENEE-VKVVLADHIPHNDAAKSSF-------------IERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSI 206 +EGH RW CP P+ NTG K GPCG F G G + PGP+TV WEESI H G+P + ++ + ++ +L DHIPHNDA F + + +TV+IPD+ C C L L MTDK + +ACS Q+ C S Y+TCT++ I Sbjct: 17 IEGHVRWVCPRPQS-----------TNTGIKSGPCGAVDFEG-----GYMDVVPGPMTVRWEESIFHRGAPSSIRLMKKGDDSTACLLLDHIPHNDAMVVKFPFTDPNCKISGEPLGKCSGVTQVTVNIPDIDCPDCYLLLTSVMTDK-----------YGPTTACS-QLTNGNNNC----------------STYYTCTNIKI 176
BLAST of NO02G00610 vs. NCBI_GenBank
Match: OEU05739.1 (hypothetical protein FRACYDRAFT_258474 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 84.3 bits (207), Expect = 6.000e-13 Identity = 71/217 (32.72%), Postives = 100/217 (46.08%), Query Frame = 0 Query: 7 VLVFALFGAVGVEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGMNGVRALKPGPL-TVTWEESIAHVGSPFRLAILDENEE-----------VKVVLADHIPHNDAAKSSFIERTYTPYH---LTVDIPDVRCEKCTLQLIYFMTDKTVKCG-SLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAG 208 +LV A VEGH R +CPPP TG K GPC S G+ L+ L TVTW ESI+H G+P R A+ E +L DHIPH+ ++ ++ R + +H +T+ IPDV+CE+C LQLI M+D +C Y A+ + I+ A + P + C + YH+C+ VSI G Sbjct: 19 LLVLATTITRNVEGHVRLECPPPLS-----------GKTGEKIGPC-DVSTDDGLLQSFPLQANALNTVTWLESISHPGAPVRFALSREGGGDSNGGEAATGFETCLLLDHIPHDALSRPTY--RNESSWHRSSITLWIPDVQCERCYLQLISVMSDAAHGVPIDTKCAYRAN---TNNVIEIA---------ETPESDFPACPAVYHSCSPVSIDG 209
BLAST of NO02G00610 vs. NCBI_GenBank
Match: XP_002675259.1 (hypothetical protein NAEGRDRAFT_80379 [Naegleria gruberi] >EFC42515.1 hypothetical protein NAEGRDRAFT_80379 [Naegleria gruberi]) HSP 1 Score: 77.0 bits (188), Expect = 9.500e-11 Identity = 60/215 (27.91%), Postives = 91/215 (42.33%), Query Frame = 0 Query: 8 LVFALFGAVGVEGHARWKCPPPRDENDANGNHIAFDNTGNKYGPCGPFSGMYGMNGVRALKPGPLTVTWEESI-----AHVGSPFRLA--ILDENEEVKVVLADHIPHNDAAKSSFIERTYTPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAGARAFEEFE 216 LV A+ G H R PPPR AN + PCG + + PG LTV ++ ++ +H GSP+RLA I +++ K VL DHIPH A + + +T Y +TV IPD+ C KC+L + T C C+Y + S C + +H+C+++ I G +A + F+ Sbjct: 10 LVMAVCLVTGALAHTRLVYPPPR--TSANDLYTY---------PCGGVQFFGDGQPITTIAPGKLTVQFQGTLYPTENSHDGSPYRLALSIGGDDDYNKYVLLDHIPH---ATNDVVNKTSFNYSITVTIPDINCPKCSLAMFNVQTKSMGTC----CSYPPSSTNTS----------------------TICQTAFHSCSNIVITGTKAVDTFK 184
BLAST of NO02G00610 vs. NCBI_GenBank
Match: PVD26533.1 (hypothetical protein C0Q70_14210 [Pomacea canaliculata]) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-10 Identity = 64/229 (27.95%), Postives = 100/229 (43.67%), Query Frame = 0 Query: 20 GHARWKCPPPRDENDANGNHIAFDNTGNKYGPCG-PFSGMYGMNGVRALKPGPLTVTWEESIAHVGSPFRLAILDENEEVKVVLADHIPHND-AAKSSFIERTY----------TPYHLTVDIPDVRCEKCTLQLIYFMTDKTVKCGSLQCTYHADDSACSGQIDAAAPTCFGAPNDVPCREKDTCFSNYHTCTDVSIAGARAFEEFELDSQPLDWPYKNLTMSVYGAE 237 GH R+ CP P + IAF N Y CG ++ N + ++PG T+ +EE+ SPFR+ + +L DHIPHN+ A+ SS + + + Y++TV IPDVRC++C L+L + D T G T + C G + AA +P+ + +I+ +E D+ P DWP++ M +Y E Sbjct: 27 GHVRFVCPRPASPK----SDIAFTNQSIDY--CGLNMDSVFDTNHME-VEPGLFTLRFEETHLQRNSPFRVTLHQIGANDSCLLLDHIPHNNHASISSACSKKHSEYPLGICESSTYYITVKIPDVRCDRCYLRLAFIHLDHT--AGE---TCNVGAGTCEGYVSCAAIKIRASPSG----------------KEGNISACGHYE----DNLPGDWPFR--PMDIYSVE 221 The following BLAST results are available for this feature:
BLAST of NO02G00610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00610 ID=NO02G00610|Name=NO02G00610|organism=Nannochloropsis oceanica|type=gene|length=1161bpback to top protein sequence of NO02G00610.1 >NO02G00610.1-protein ID=NO02G00610.1-protein|Name=NO02G00610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=262bpback to top protein sequence of NO02G00610.2 >NO02G00610.2-protein ID=NO02G00610.2-protein|Name=NO02G00610.2|organism=Nannochloropsis oceanica|type=polypeptide|length=205bpback to top Synonyms
Publications
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