NO02G00570, NO02G00570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00570 vs. NCBI_GenBank
Match: EWM30614.1 (obp33pep like protein [Nannochloropsis gaditana]) HSP 1 Score: 241.5 bits (615), Expect = 2.300e-60 Identity = 129/191 (67.54%), Postives = 141/191 (73.82%), Query Frame = 0 Query: 6 PRLFLLLHHISKRQNVRTLLTSAAAFGAEVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQNIQVWGIEIGETAVNVEEAPWDKG---XXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWAAAKRQ----QERKIKEE 190 PRL LLLHHISKRQNVRTLLTSAAAFGAEVLVVGQP F+E SHVP+RLA A +GE P PLYRRF GTLEECRD L QN+Q+WG+EIGE AVNVEE PW GNEGTGMS+RQARVCDGF+YISQYGQGTASLNVAVAGSIVMHR+S WAA Q +ER + +E Sbjct: 34 PRLLLLLHHISKRQNVRTLLTSAAAFGAEVLVVGQPSFNETSHVPRRLAEAL--TQGENASICQPQPLYRRFHGTLEECRDQLREQNVQIWGVEIGEAAVNVEEIPWATSASKWEKEGRGGIALLLGNEGTGMSARQARVCDGFVYISQYGQGTASLNVAVAGSIVMHRFSEWAADSCQGGAEEERHVNDE 222
BLAST of NO02G00570 vs. NCBI_GenBank
Match: PKA55345.1 (21S rRNA (GM2251-2'-O)-methyltransferase [Apostasia shenzhenica]) HSP 1 Score: 113.2 bits (282), Expect = 9.400e-22 Identity = 69/176 (39.20%), Postives = 99/176 (56.25%), Query Frame = 0 Query: 3 PPSPRLFLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQ-NIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWA 177 PP+ LL+H+++KR NV T++ SA AFG +E+++VG+ F+ AF + A L+R F +L E R YL Q N + G+EI + A++V + P+ K GNEGTG+S ++ +CD F+YI QYG GTASLNV VA SIV+H + WA Sbjct: 22 PPTLESILLVHNVAKRHNVGTMVRSATAFGVSEMILVGRRDFN-----------AFGSHGSTAH------LLFRHFH-SLSEARSYLKEQRNCDICGVEIADGALSVTQHPFKKS--------TAFLLGNEGTGLSPKECEICDFFVYIPQYGSGTASLNVTVAASIVLHHFGAWA 171
BLAST of NO02G00570 vs. NCBI_GenBank
Match: CEM20198.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 111.7 bits (278), Expect = 2.700e-21 Identity = 75/199 (37.69%), Postives = 110/199 (55.28%), Query Frame = 0 Query: 2 SPPSPRLFLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQNIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWAAAKRQQERKIKEEMKEKGNEMEE 200 S P + FLLLH+I KR N +LL SA+AFG +EVLVVG+ ++L T + PH L R+ TLE ++LHA++I + G+EI + A+ V GNEGTGM+++Q ++CD F+Y QYG GTASLNV VAGSIV+H +++WA + K ++ +++E+ Sbjct: 36 SQPQHQSFLLLHNIGKRSNWGSLLRSASAFGVSEVLVVGE----------RKLKT----FGNQGTLPH----LQFRYFNTLEAAVEWLHARDITLIGVEIVDEAIPVHH-------PQAFERSSCIMLGNEGTGMTAKQLQMCDRFVYTPQYGGGTASLNVTVAGSIVLHHFAIWAGFREGSRTGHKFDVAPVRSKLEQ 209
BLAST of NO02G00570 vs. NCBI_GenBank
Match: OQR91181.1 (hypothetical protein ACHHYP_04915 [Achlya hypogyna]) HSP 1 Score: 110.9 bits (276), Expect = 4.700e-21 Identity = 79/190 (41.58%), Postives = 104/190 (54.74%), Query Frame = 0 Query: 2 SPP------SPR-LFLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQ--NIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWAAAKRQ 182 SPP SPR ++++I KR+N+R LL SA AFG +EV VVGQ +L + AA+ E P P TL+EC+ L A+ + +V GIEI +A +V + GNEG+G+S Q +CDGF+YI QYG GTASLNV VA SI+MHRY+VWAA R+ Sbjct: 3 SPPPAPAAASPRGQIWIINNIQKRKNIRDLLLSATAFGVSEVFVVGQ-----------KLLSFEAALHFEDSLPGFKLPYPITRCRTLDECKALLLARDPSTRVIGIEILHSAKSVNDP-----DVFVADAPMAFMVGNEGSGLSDAQVAICDGFVYIPQYGGGTASLNVTVAASIIMHRYAVWAATNRR 176
BLAST of NO02G00570 vs. NCBI_GenBank
Match: XP_012211435.1 (hypothetical protein SPRG_16736 [Saprolegnia parasitica CBS 223.65] >KDO17854.1 hypothetical protein SPRG_16736 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 110.5 bits (275), Expect = 6.100e-21 Identity = 73/169 (43.20%), Postives = 93/169 (55.03%), Query Frame = 0 Query: 11 LLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQN--IQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWA 177 ++++I KR+N+R LL SAAAFG EV VVG K L+ A ++ E P P+ R TL ECR L QN Q+ GIEI A +V + GNEG+G+S Q +CDGF+YI QYG GTASLNV VA SI+MH+Y+VWA Sbjct: 14 IINNIQKRKNIRDLLLSAAAFGVVEVYVVGH----------KLLSFDAALLQFEDSGFELPFPITR--CATLVECRSLLKTQNPSTQIVGIEILHNAKSVND------PDVFTEAPMAFMVGNEGSGLSDAQVAICDGFVYIPQYGGGTASLNVTVAASIIMHKYAVWA 164
BLAST of NO02G00570 vs. NCBI_GenBank
Match: PNW83678.1 (hypothetical protein CHLRE_05g238950v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 110.5 bits (275), Expect = 6.100e-21 Identity = 73/194 (37.63%), Postives = 100/194 (51.55%), Query Frame = 0 Query: 2 SPPSPRLFLLLHHISKRQNVRTLLTSAAAFGA-EVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYL-HAQNIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWAAAKRQQERKIKEEMKEK 194 S P +++ H +SKR N+ T++ SA AFG EV +VG F+ AF R FD TL +C +L + +V G+EI E A+ V+E P+ GNEG GM+ RQ +CDGF+YI Q+G GTASLNVAVA SIV+H +++WAA +Q K + EK Sbjct: 25 STSGPASYIITHSVSKRHNIGTIVRSATAFGVKEVCLVGSRQFNTFGSHGSDAHVAF-----------------RHFD-TLAKCVQHLKEVEGCRVLGVEICEGALPVQEHPF--------TGPTAFLLGNEGQGMTDRQMALCDGFVYIPQHGAGTASLNVAVAASIVLHHFAIWAAYPERQREGYKFVVAEK 192
BLAST of NO02G00570 vs. NCBI_GenBank
Match: ETK72046.1 (hypothetical protein L915_20785 [Phytophthora parasitica] >ETL25474.1 hypothetical protein L916_20668 [Phytophthora parasitica] >ETL78687.1 hypothetical protein L917_20530 [Phytophthora parasitica] >ETM31953.1 hypothetical protein L914_20545 [Phytophthora parasitica] >ETP01487.1 hypothetical protein F441_21275 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 109.8 bits (273), Expect = 1.000e-20 Identity = 65/173 (37.57%), Postives = 97/173 (56.07%), Query Frame = 0 Query: 5 SPRLFLLLHHISKRQNVRTLLTSAAAFGA-EVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQNIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWA 177 +PR FL+L+++ K +N++ +L SA+AFG EVLVVGQ FD L L++ V A TL++CR ++I++ G+EI A ++ + P+ GNEG+GM+S Q +CD F+YI QYG GTASLNV VA SI++ +++WA Sbjct: 8 TPRHFLILNNVQKNKNIKNMLVSASAFGVKEVLVVGQKKFD-LQEQEPFLSSLSCRVTRVA---------------TLKDCRALCQERSIRIVGVEIMHDAKSIADQPFS--------GDTAFIMGNEGSGMNSAQVAICDDFVYIPQYGGGTASLNVTVAASIILQSFALWA 156
BLAST of NO02G00570 vs. NCBI_GenBank
Match: XP_008898277.1 (hypothetical protein PPTG_06140 [Phytophthora parasitica INRA-310] >ETI31676.1 hypothetical protein F443_21386 [Phytophthora parasitica P1569] >ETN15862.1 hypothetical protein PPTG_06140 [Phytophthora parasitica INRA-310] >ETP29639.1 hypothetical protein F442_21223 [Phytophthora parasitica P10297] >KUF80891.1 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Phytophthora nicotianae]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 0 Query: 5 SPRLFLLLHHISKRQNVRTLLTSAAAFGA-EVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQNIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWA 177 +PR FL+L+++ K +N++ +L SA+AFG EVLVVGQ FD L L++ V A TL++CR + I++ G+EI A ++ + P+ GNEG+GM+S Q +CD F+YI QYG GTASLNV VA SI++ +++WA Sbjct: 8 TPRHFLILNNVQKNKNIKNMLVSASAFGVKEVLVVGQKKFD-LQEQEPFLSSLSCRVTRVA---------------TLKDCRALCQERGIRIVGVEIMHDAKSIADQPFS--------GDTAFIMGNEGSGMNSAQVAICDDFVYIPQYGGGTASLNVTVAASIILQSFALWA 156
BLAST of NO02G00570 vs. NCBI_GenBank
Match: ETO60379.1 (hypothetical protein F444_21404 [Phytophthora parasitica P1976]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 0 Query: 5 SPRLFLLLHHISKRQNVRTLLTSAAAFGA-EVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYRRFDGTLEECRDYLHAQNIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWA 177 +PR FL+L+++ K +N++ +L SA+AFG EVLVVGQ FD L L++ V A TL++CR + I++ G+EI A ++ + P+ GNEG+GM+S Q +CD F+YI QYG GTASLNV VA SI++ +++WA Sbjct: 8 TPRHFLILNNVQKNKNIKNMLVSASAFGVKEVLVVGQKKFD-LQEQEPFLSSLSCRVTRVA---------------TLKDCRALCQERGIRIVGVEIMHDAKSIADQPFS--------GDTAFIMGNEGSGMNSAQVAICDDFVYIPQYGGGTASLNVTVAASIILQSFALWA 156
BLAST of NO02G00570 vs. NCBI_GenBank
Match: XP_002516828.1 (PREDICTED: uncharacterized tRNA/rRNA methyltransferase YsgA [Ricinus communis] >EEF45442.1 rRNA methylase, putative [Ricinus communis]) HSP 1 Score: 109.4 bits (272), Expect = 1.400e-20 Identity = 68/170 (40.00%), Postives = 95/170 (55.88%), Query Frame = 0 Query: 9 FLLLHHISKRQNVRTLLTSAAAFG-AEVLVVGQPGFDELSHVPKRLATAFAAVEGEAEPPHPPTPLYR-RFDGTLEECRDYLHAQNIQVWGIEIGETAVNVEEAPWDKGXXXXXXXXXXXXXGNEGTGMSSRQARVCDGFMYISQYGQGTASLNVAVAGSIVMHRYSVWA 177 ++L+H+I+KR NV TL SA AFG E+++VG+ F+ AF + H T R R +L RDYL + + G+EI + A+ V E P+ K GNEGTG+S+++ +CD F+YI QYG+GTASLNV VA SIV+H + VWA Sbjct: 6 YVLVHNIAKRHNVGTLARSATAFGVTELILVGRRDFN-----------AFGS--------HGSTSHLRFRHFHSLLNARDYLKEKECDICGVEITDGALPVNEHPFKKS--------TAFLLGNEGTGLSAKECEICDFFVYIPQYGRGTASLNVTVAASIVLHHFGVWA 148 The following BLAST results are available for this feature:
BLAST of NO02G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00570 ID=NO02G00570|Name=NO02G00570|organism=Nannochloropsis oceanica|type=gene|length=703bpback to top protein sequence of NO02G00570.1 >NO02G00570.1-protein ID=NO02G00570.1-protein|Name=NO02G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=205bpback to top Synonyms
Publications
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