NO02G00460, NO02G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00460 vs. NCBI_GenBank
Match: EWM30619.1 (pyridoxamine 5 -phosphate oxidase- fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 352.8 bits (904), Expect = 1.100e-93 Identity = 185/302 (61.26%), Postives = 228/302 (75.50%), Query Frame = 0 Query: 12 VTSTAAALLCSLPLFRAFAVAPARRLSPSFIVPPHRFFASIPCPVMSATAAPAASNGGLADIGQAPSSSFLTSSSPAKEES--GELKPQWVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 V+ TA LLC+LP+ RA VAP R + +F+ P F S P M+ A GGLADIGQA SSS S++ GE KP+WVLDLG SMARNNRD+HSRYIQLATVG DS+++KPFVRTVVFRGF+NG+D QDKHL+K+ITD+RSEKI L+ HP AEIAWYFVKTREQYRL GR+++V+ + D+ LQ+ARKQQW NLS++A+ QFLWPYPKH SP DQDP VF+P++P +A PP+TFCLLL+RV EVDHL+LK +PQ+RTVH+R +G+ EGEE G W +TKVNP Sbjct: 14 VSHTATTLLCALPVLRATFVAPVRNI--AFLHSPFNRFPSSLTP-MATMKAAEIGEGGLADIGQARSSSPTASNADDASHGARGEKKPKWVLDLGISMARNNRDAHSRYIQLATVGFGSDDSSVIKPFVRTVVFRGFYNGMDPQDKHLLKIITDARSEKIPQLTLHPDAEIAWYFVKTREQYRLRGRVEIVTPTSKDRHLQAARKQQWNNLSESARAQFLWPYPKHPSPLDQDPSVFSPDIPPTLASAPPETFCLLLVRVSEVDHLDLKASPQRRTVHARR-KGQKEGEE--GDWEVTKVNP 309
BLAST of NO02G00460 vs. NCBI_GenBank
Match: EWM22322.1 (pyridoxamine 5 -phosphate oxidase- fmn-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 172.2 bits (435), Expect = 2.600e-39 Identity = 111/286 (38.81%), Postives = 146/286 (51.05%), Query Frame = 0 Query: 56 VMSATAAPAASNGGLADIGQAPSSSFLTSSSPAKEESGELKPQWVLDLGRSMARNNRDSHSRYIQLAT-------------VGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYP-----KHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSR------------ETRGEGEGEEGRGGWRLTKVNP 312 +M+A A SN GL DIG S S P + + +P WV L ++ N D HSR++QLAT V + + +++P VR VVFRGF N ++ K+ITDSRSEKI + +P+ EI+WYF++TREQ+RL+GR +V++ D L AR QW LSDNA+ QF WP P D ++ P P PP+TF LLL VDHL+L+PNPQ RTVH E RGEG E W +VNP Sbjct: 47 LMAAATPTAGSNEGLRDIGGTCVVSKNDQSDPRETVASASQPPWVHALNNALEANKADMHSRFVQLATIAHFSFAKQETTDVSENISPQGLLRPRVRWVVFRGFLN----ENTTTFKVITDSRSEKIKEILQNPYGEISWYFIQTREQFRLAGRCQLVTADELDPVLAVARHDQWAALSDNARKQFSWPAPGLNQDSDGISEDTRKALYNPP-PVPGTSPPPETFVLLLFHPFSVDHLQLRPNPQVRTVHETVQWSINKQPDGIEIRGEGVDES--DAWAARRVNP 325
BLAST of NO02G00460 vs. NCBI_GenBank
Match: AUC61558.1 (Pyridoxamine 5'-phosphate oxidase [Cyanobacterium sp. HL-69]) HSP 1 Score: 161.8 bits (408), Expect = 3.500e-36 Identity = 86/213 (40.38%), Postives = 122/213 (57.28%), Query Frame = 0 Query: 99 WVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 W L +++ N +SRY QLAT+ P +N RTVVFRGF++ D + +++ITD RSEK HL P +EI WYF KTREQ+R++G ID+++ D+ + +ARKQ W LSDNAK+QF W P + D + TP+ P DTFCLLL + ++VDHL+LK NPQ R ++ E + W ++ +NP Sbjct: 8 WRSPLAKALHLNRAKPYSRYFQLATISPEGFPTN------RTVVFRGFYD-----DTNWLQIITDIRSEKYQHLQKQPQSEICWYFTKTREQFRINGYIDIITHQEKDQKMINARKQVWDKLSDNAKIQFTWANPGETL---NDESIITPD----NLDNPLDTFCLLLFKPQKVDHLQLKGNPQNRYLYQLEEQNH---------WEMSPINP 193
BLAST of NO02G00460 vs. NCBI_GenBank
Match: CEM11802.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 160.2 bits (404), Expect = 1.000e-35 Identity = 96/252 (38.10%), Postives = 144/252 (57.14%), Query Frame = 0 Query: 69 GLADIGQAPSSSFLTSSSPAKEESGELK-------PQWVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDR-QDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPD-QDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 GLADIG AP + T+ A E+ GE + P+W+ + +++ +N + +++ QLAT+ +P RTVVFRGF VD+ + L+K+ITD+RS+K+ + +P AE WYF ++R+Q+R++G + VVS D+ R W LSDNA++QF+WP P+ PPD D F P P PPDTFCL+++ E VD+L+LKPNPQ R + +R + G+ W +VNP Sbjct: 5 GLADIGAAPPAPPQTA---ADEQEGEPEALLPAAIPRWMRAVEKNIHQNRNNPPAKWFQLATI------DETSRPRCRTVVFRGF---VDKTSPEGLIKIITDARSQKVGQVERNPAAEACWYFERSRDQFRIAGNLRVVSPQETDERWARERVNTWKALSDNARIQFVWPEPRAPRPPDADDQADFYPPAPD--PSSPPDTFCLVILTPESVDYLQLKPNPQLRHLFTRRV----DESSGQMCWDECRVNP 238
BLAST of NO02G00460 vs. NCBI_GenBank
Match: WP_069790352.1 (pyridoxamine 5'-phosphate oxidase [Cyanobacterium sp. IPPAS B-1200] >OEJ79102.1 pyridoxamine 5'-phosphate oxidase [Cyanobacterium sp. IPPAS B-1200]) HSP 1 Score: 159.1 bits (401), Expect = 2.300e-35 Identity = 84/213 (39.44%), Postives = 121/213 (56.81%), Query Frame = 0 Query: 99 WVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 W L +++ N +SRY QLAT+ +N RTVVFRGF+ +D + +++ITD RSEK HL P +EI WYF KTREQ+R++G ID+++ D+ + +ARKQ W LSDNAK+QF W P + D + TP+ P DTFCLL+ + ++VDHL+LK NPQ R ++ E + W ++ +NP Sbjct: 8 WRSPLAKALHINRAKPYSRYFQLATISAEGYPTN------RTVVFRGFY-----EDTNWLQIITDIRSEKYQHLQKRPQSEICWYFTKTREQFRINGHIDIITHQEKDQKMLNARKQVWDKLSDNAKIQFTWANPGETL---NDESIITPD----NLDNPLDTFCLLIFKPQKVDHLQLKGNPQNRYLYQLEEQNH---------WEMSPINP 193
BLAST of NO02G00460 vs. NCBI_GenBank
Match: XP_013898749.1 (pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein [Monoraphidium neglectum] >KIY99729.1 pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein [Monoraphidium neglectum]) HSP 1 Score: 157.5 bits (397), Expect = 6.600e-35 Identity = 87/206 (42.23%), Postives = 126/206 (61.17%), Query Frame = 0 Query: 97 PQWVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRG 303 PQW L RS+ +N +++RY+QLATV P +N RTVVFRGF +G D + +TD RS K++ ++S+P AE+AWY TREQYR+SGR+D+V + D L +AR + W ++SD A++QFLWP+P P +D G+F P AG P FCL+++ V+EVD++ LK N +R +R +G EG+G Sbjct: 378 PQWRTMLQRSLGKNRSLAYARYVQLATVRPDGRPAN------RTVVFRGFLDGADS-----LTFVTDRRSNKVSEVASNPAAEVAWYLPITREQYRISGRLDIVQAGRDDAQLSAARAKAWSSMSDAARLQFLWPHPGLPRLP-EDEGLFLQPAPES-AGEPVSDFCLVVLHVDEVDYINLKQN--RRISFARAAAAGSQGGEGQG 568
BLAST of NO02G00460 vs. NCBI_GenBank
Match: WP_065715256.1 (pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 7003] >ANV85582.1 pyridoxamine 5'-phosphate oxidase [Synechococcus sp. PCC 7003]) HSP 1 Score: 152.9 bits (385), Expect = 1.600e-33 Identity = 95/221 (42.99%), Postives = 121/221 (54.75%), Query Frame = 0 Query: 94 ELKPQWVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYP---KHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 EL P W L R++ RN H R+ QLATV P T SN RTVVFRGF + + +K+ITD RSEKI HLS+ P AEIAWYF KTREQ+R SG+I +V++ + L+ AR+Q W LSD A+ QF WP P + + D P + P F LLL +V +VDHLEL+ NPQ R ++ R G W+ VNP Sbjct: 4 ELAP-WRSPLARALHRNKSQPHHRFFQLATVTPVGTPSN------RTVVFRGF-----LDESNDLKIITDQRSEKINHLSACPDAEIAWYFTKTREQFRFSGQITMVTAQSSSSRLKPARQQTWQALSDAARAQFFWPQPGDRRSENLADFHPDAVNDQEPV-------SNFVLLLFQVTKVDHLELRGNPQNRFLYHRTADGT---------WQQNFVNP 196
BLAST of NO02G00460 vs. NCBI_GenBank
Match: AFZ47634.1 (pyridoxamine 5'-phosphate oxidase-related FMN-binding protein [Cyanobacterium stanieri PCC 7202]) HSP 1 Score: 152.1 bits (383), Expect = 2.800e-33 Identity = 86/213 (40.38%), Postives = 116/213 (54.46%), Query Frame = 0 Query: 99 WVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 W L +++ N SRY QLATV P SN RTVVFRGF+N D + +++ITD RSEK HL +EI WYF KTREQ+R+ G I +++ +K + +AR++ W LSDNAK+QF W P + TPE P DTFCLLL + ++VDHL LK NPQ R ++ +T + W +T +NP Sbjct: 8 WRSPLAKALHLNRSKPFSRYFQLATVTPEGLPSN------RTVVFRGFYN-----DTNWLQIITDIRSEKYQHLQQQSRSEICWYFTKTREQFRIDGHIQIITHQEEEKIMLNARQEVWEKLSDNAKIQFSWANPGEKL---NNESAITPE----NLDNPLDTFCLLLFKPQKVDHLLLKGNPQHRYLYQLDT---------QHNWIMTAINP 193
BLAST of NO02G00460 vs. NCBI_GenBank
Match: WP_099237607.1 (pyridoxamine 5'-phosphate oxidase [Synechococcus sp. BDU 130192]) HSP 1 Score: 152.1 bits (383), Expect = 2.800e-33 Identity = 95/219 (43.38%), Postives = 120/219 (54.79%), Query Frame = 0 Query: 94 ELKPQWVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPP-DTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 EL P W L R++ RN H R+ QLATV P KP RTVVFRGF G + +K+ITD RSEKI+HL++ P AEIAWYF KTREQ+R SG+I +V++ + L AR+Q W LSD A+ QFLWP P D+ PT + P F LLL +V +VDHLEL+ NPQ R ++ G W+ VNP Sbjct: 6 ELAP-WRSPLARALHRNKSQPHHRFFQLATVTP------TGKPRNRTVVFRGFLEG-----SNDLKIITDQRSEKISHLATCPDAEIAWYFTKTREQFRFSGQIKLVTAASSSSRLNRARQQTWQALSDAARAQFLWP-----QPGDRRSENLADFQPTAVNDQEPVSNFVLLLFQVTKVDHLELRGNPQNRFLYDLTADGT---------WQQKTVNP 198
BLAST of NO02G00460 vs. NCBI_GenBank
Match: WP_017302208.1 (hypothetical protein [Nodosilinea nodulosa]) HSP 1 Score: 151.8 bits (382), Expect = 3.600e-33 Identity = 89/230 (38.70%), Postives = 128/230 (55.65%), Query Frame = 0 Query: 82 LTSSSPAKEESGELKPQWVLDLGRSMARNNRDSHSRYIQLATVGPHPTDSNMVKPFVRTVVFRGFHNGVDRQDKHLVKMITDSRSEKIAHLSSHPHAEIAWYFVKTREQYRLSGRIDVVSSLTHDKALQSARKQQWGNLSDNAKVQFLWPYPKHSSPPDQDPGVFTPELPTGIAGGPPDTFCLLLMRVEEVDHLELKPNPQQRTVHSRETRGEGEGEEGRGGWRLTKVNP 312 ++ S P+ + L P W L R++ RN +SRY QLATV +N RTVVFRG+ D + + ++TD RS K+ +++HP AE WYF TREQ+RL G I VV + D AL AR+Q W +LSD+++ QF WP+P P+ D F+P+ I PP FCL+L+ +VDHLEL+ +PQ RT+++R+ W++ VNP Sbjct: 1 MSDSDPSLLTTSTLAP-WRSPLARALHRNRSRPYSRYFQLATVTAEGRPTN------RTVVFRGW-----LPDTNTLTVVTDQRSAKVTDIATHPWAEACWYFTHTREQFRLGGPIQVVGA---DAALGEARQQAWESLSDSSRQQFYWPHPARPRAPEAD---FSPQ---AIGDIPPAAFCLVLLTPHQVDHLELRGSPQNRTLYTRQADAP---------WQIQAVNP 200 The following BLAST results are available for this feature:
BLAST of NO02G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00460 ID=NO02G00460|Name=NO02G00460|organism=Nannochloropsis oceanica|type=gene|length=2120bpback to top protein sequence of NO02G00460.1 >NO02G00460.1-protein ID=NO02G00460.1-protein|Name=NO02G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top Synonyms
Publications
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