NO02G00440, NO02G00440 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00440 vs. NCBI_GenBank
Match: EWM28181.1 (sh2 domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 235.7 bits (600), Expect = 2.100e-58 Identity = 128/238 (53.78%), Postives = 164/238 (68.91%), Query Frame = 0 Query: 64 RIAYLYSVPLIHRLGNVVHEPDV-----LDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN--GEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRP 295 R+ YLYS PL+H+ G E D+ +D GQEL L+ TL ++ RR+ FRAEVATV+N R L+T+GCRMLHYTG G PSCLIFE E GE N L+ E L++LF AGGVRT+LVFVSA HSE G +F AAGV HVVA+K+D KV+D AA +FAE FYLS+ G TVR AF++ T+ + E+ VS ++D++FLLLP DG HD+A+F + A G +DE+P P C P Sbjct: 62 RLGYLYSAPLVHKAGGQAKELDMQDGMHIDIGQELGRLKHTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPVGETNVLSIETLTELFAAGGVRTQLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGVS--SEDEQFLLLPADGEHDLAVFDD-----AEMGEFVDESPPPVPNTCDPPP 292
BLAST of NO02G00440 vs. NCBI_GenBank
Match: CBJ30247.1 (SH2 domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 165.2 bits (417), Expect = 3.400e-37 Identity = 100/206 (48.54%), Postives = 128/206 (62.14%), Query Frame = 0 Query: 96 LRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN----GEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGN---TVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRP 295 +R L ESGR++ FR+EVA NFR L+ GCRMLHYTGHG+ L FES + G PL L +LF+AGGVRTELVF+S+C SE++G++F AGVPHVVAVK +E VTD AA+ FA+QFY +L++ TV+ AF I + ++ A + D FLLLP GNHDV IF G +DET P +RP Sbjct: 2 IRMKLRESGRQIRFRSEVAKPSNFRELLNSGCRMLHYTGHGSNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVRTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNAHPPHARPQGD-HFLLLPHGGNHDVRIFD-----TLPEGRFVDETREPPARPRCARP 201
BLAST of NO02G00440 vs. NCBI_GenBank
Match: OYV13256.1 (hypothetical protein CG446_203, partial [Methanosaeta sp. ASO1]) HSP 1 Score: 161.4 bits (407), Expect = 4.900e-36 Identity = 95/224 (42.41%), Postives = 131/224 (58.48%), Query Frame = 0 Query: 64 RIAYLYSVPLI-HRLGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGVR-TELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSV-SAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPA 285 R+A LYS PLI VH ++LD E + + K+L+++G + R++ AT NFR +V LGC+ LH++GHG P L FE G A+ + ++L +LF+AGG ++VFVSACHS G +F AGV HVVAV+ +E V D AA FA FY +L TV+ AF G ++ + + +KFLLLPE G HDVAIF A A G D +P+ Sbjct: 6 RLAMLYSSPLIWQNEKGQVHPIELLDFESEKEIISKSLMQTGISIEIRSDFATADNFRAMVVLGCQALHFSGHGLPGVLAFEDGRGGAHLIEADLLRELFQAGGPSGIQMVFVSACHSRQIGEAFVKAGVEHVVAVRLEEPVYDKAAANFARAFYQALAARKTVQQAFDSGRAAVKTTPHLPDTAFEAEKFLLLPEYGKHDVAIF-----ADAKKGDFTDSSPS 224
BLAST of NO02G00440 vs. NCBI_GenBank
Match: CBJ30255.1 (SH2 domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 160.2 bits (404), Expect = 1.100e-35 Identity = 101/238 (42.44%), Postives = 136/238 (57.14%), Query Frame = 0 Query: 64 RIAYLYSVPLIH--RLGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN----GEANPLTTEMLSDLFRAGG-VRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTG---NTVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDET-PAPSRTLC 291 R+ ++++ PL+ N+ E L T +EL+ +R L GR++ FRAEVA N L+ GC +LHY GHGN L FES G PL + L +LFR G V+T+LVF+S+C SE++G+ F AAGVPHVVAVK + VTD AAR FA FY +L +TV+ AF + + + A + +++ FLLLP DGNHDV IF G L+DET P R C Sbjct: 21 RLGFIHAAPLVRFDHNRNMFRELKALRTCEELEFVRNKLRGFGRQIKFRAEVANAMNLTRLLHSGCLLLHYAGHGNDEYLAFESTTEWKCGIMEPLKVKYLKNLFRVDGIVKTQLVFISSCSSEASGNVFVAAGVPHVVAVKHNAGVTDGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGAPKHEEDLFLLLPRDGNHDVRIFD-----TLPEGKLVDETHRLPPRPPC 253
BLAST of NO02G00440 vs. NCBI_GenBank
Match: XP_009035732.1 (hypothetical protein AURANDRAFT_63276 [Aureococcus anophagefferens] >EGB09688.1 hypothetical protein AURANDRAFT_63276 [Aureococcus anophagefferens]) HSP 1 Score: 146.4 bits (368), Expect = 1.600e-31 Identity = 116/319 (36.36%), Postives = 159/319 (49.84%), Query Frame = 0 Query: 8 LFSRKKKAKTGSTPAPTQPVPPQNGTTTTHTGNISATASTSLSSIIASPSLNGVGPRIAYLYSVPLIHRL--GNVVHEPDVLDTGQ-ELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESE-NGEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRPSFSSVATLRSRNASPSSTPPSVPLRDRA 323 L+ R++ KT ++ VP G + + ST SP +G R+ YL + PL++R G+ P V E+ L+ L S + FR+ VATV R L+T+GC LH++GHG P L FE E E + + L LF AGG R LVF +AC SE AG +F A VPHV+ V+ D ++ D AAR AEQFY +++ G TVR AF IGV ++ A + +LLLPEDG+HDV + G DA+ +G + T P SRP+ A+ S P PL RA Sbjct: 793 LWMRRRSKKT------SKVVPTMKTLVVAPAGTPTRSISTETCGTPTSP-FDGQPFRLGYLCAEPLVYRKPDGSFGALPPVQSRRDGEVSLLKAVLARSETAVRFRSAVATVTELRSLLTVGCDALHFSGHGLPRSLSFELEGRAELTMVGHDRLEALFAAGGHRARLVFAAACKSEFAGRAF-ARHVPHVICVRVDARLGDRAARDMAEQFYAAILRGRTVREAFDIGVAAVGAAGAA--------YLLLPEDGDHDVPLV-RGDDASLVAGDVALATARPGALRDESRPA-----------AASSCPAPPAPLFGRA 1083
BLAST of NO02G00440 vs. NCBI_GenBank
Match: XP_005854758.1 (sh2 domain containing protein [Nannochloropsis gaditana CCMP526] >EKU21603.1 sh2 domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 144.8 bits (364), Expect = 4.800e-31 Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 0 Query: 65 IAYLYSVPLIHR-LGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSV-SAHNDDKKFLLLPEDGNHDVAIF 266 ++ L+S PL R L +H ++L QE + L ++L+ESG + R + T R VTLG R LHY+GHG+ + L FE G + +ML L AG + +LV VS+C+S+ AG +F A VPHVV + + +TD AA F + FYLSL GNTV+++F IG ++ A +V S + KF LLPE +H+VAIF Sbjct: 573 LSVLFSAPLAWRDLEGNLHPIELLFFDQEREQLVQSLMESGSDICARFDFCTTDTLRSAVTLGARALHYSGHGHRNLLTFEDGAGGLQLVPVDMLRSLCAAGSHKLDLVVVSSCYSKLAGQAFVDAEVPHVVCINLEATITDSAALAFTKAFYLSLFVGNTVQHSFAIGQQAVAASPNVPSPEREVSKFELLPEGCDHNVAIF 775
BLAST of NO02G00440 vs. NCBI_GenBank
Match: EWM22665.1 (sh2 domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 144.8 bits (364), Expect = 4.800e-31 Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 0 Query: 65 IAYLYSVPLIHR-LGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSV-SAHNDDKKFLLLPEDGNHDVAIF 266 ++ L+S PL R L +H ++L QE + L ++L+ESG + R + T R VTLG R LHY+GHG+ + L FE G + +ML L AG + +LV VS+C+S+ AG +F A VPHVV + + +TD AA F + FYLSL GNTV+++F IG ++ A +V S + KF LLPE +H+VAIF Sbjct: 613 LSVLFSAPLAWRDLEGNLHPIELLFFDQEREQLVQSLMESGSDICARFDFCTTDTLRSAVTLGARALHYSGHGHRNLLTFEDGAGGLQLVPVDMLRSLCAAGSHKLDLVVVSSCYSKLAGQAFVDAEVPHVVCINLEATITDSAALAFTKAFYLSLFVGNTVQHSFAIGQQAVAASPNVPSPEREVSKFELLPEGCDHNVAIF 815
BLAST of NO02G00440 vs. NCBI_GenBank
Match: GBG26340.1 (Ran-binding protein 9, partial [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 139.8 bits (351), Expect = 1.500e-29 Identity = 96/272 (35.29%), Postives = 135/272 (49.63%), Query Frame = 0 Query: 19 STPAPTQPVPPQNGTTTTHTGNISATASTSLSSIIASPSLNGVGPRIAYLYSVPLIHRLGNVVHEPD-------VLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGV------RTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSA------------HNDDKKFLLLPEDGNHDVAIF 266 + P+PT G + + +GN + + +I +G PR++ L+S+PL+H PD ++ E L +T ++ R + AT+ R VTL R +HY+GHG+ L+FE + G A P+ T +L DL AGG + +L FVSACHSE AG +F AGVPHVV VK E++ D AA+ F FYL L G TVR AF + ++ A+ KFLLLP+D NHDV IF Sbjct: 2242 ANPSPTS----GGGPSLSGSGNGDVMMNPMVHDMI-QDERDGFRPRLSVLFSIPLVH------FGPDGQPMACASIEYEAERHMLMQTFQDAKRDINLSFGFATMDRLRSEVTLRSRAIHYSGHGSRDALLFEDQIGGARPVATSVLRDL--AGGASGSKMSKVKLAFVSACHSEFAGQAFIDAGVPHVVCVKVAERIQDTAAQAFTRWFYLELAIGGTVRKAFDVATQAVRAQEQARVGGVAASMAPSIRPEQASKFLLLPKDANHDVPIF 2500
BLAST of NO02G00440 vs. NCBI_GenBank
Match: XP_002291856.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90707.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 139.4 bits (350), Expect = 2.000e-29 Identity = 91/239 (38.08%), Postives = 131/239 (54.81%), Query Frame = 0 Query: 33 TTTTHTGNISATASTSLSSIIASPSLNGVGPRIAYLYSVPLIHRLG-NVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAG-GVRT---ELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDD-KKFLLLPEDGNHDVAIF 266 TT T NI+A T + P + G I L+S PL+ R G N H ++LD E L + E+ R + + AT + +T GC LH++GHG+P L FE +G + L+ E L L G G R + VFVSACHS AG +F AGVPHVV + + ++ D AA F FY +L G ++++AF++G ++ V+ +++ KKF+LLP+DGNHDVAIF Sbjct: 1741 TTLVSTDNINALQLTHSAGSKQIPFVGG-NNTITVLFSAPLVWRDGENEYHPIELLDFELEKSLLWQCFSEASRSIDLSYDNATTDRLQSALTKGCGCLHFSGHGHPQFLTFEDGSGGIHWLSVEQLQSLVSVGTGNRDPPFKFVFVSACHSGLAGQTFVDAGVPHVVCCQQESQLMDSAAVSFTRAFYFALALGRSLKDAFEMGKQAVSCSPVVTNPSEEMKKFMLLPQDGNHDVAIF 1978
BLAST of NO02G00440 vs. NCBI_GenBank
Match: ETO12905.1 (hypothetical protein RFI_24470, partial [Reticulomyxa filosa]) HSP 1 Score: 138.3 bits (347), Expect = 4.500e-29 Identity = 75/165 (45.45%), Postives = 107/165 (64.85%), Query Frame = 0 Query: 107 LTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN--GEANPLTTEMLSDLFRAGGV-RTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIG---VTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIF 266 + F+ + AT + R LV++ R++HY+GHG P+ L+ ES++ G AN +++ L DL GG +LVFVSACHS + GH+F AG HVV V +++V D AA+ F QFY +LV G TV+ AF IG + + + E S+ A N+ +KFLLLPED HDV +F Sbjct: 11 IRFKEDFATAESIRELVSMSTRVIHYSGHGVPNQLVLESDDDIGIANKMSSTQLRDLITTGGAPNLDLVFVSACHSFATGHAFVQAGAKHVVCVTQNDRVLDKAAKQFTYQFYFNLVAGKTVQEAFDIGRQVLKTDLHEDSL-AQNESEKFLLLPEDERHDVVLF 174 The following BLAST results are available for this feature:
BLAST of NO02G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00440 ID=NO02G00440|Name=NO02G00440|organism=Nannochloropsis oceanica|type=gene|length=1626bpback to top protein sequence of NO02G00440.1 >NO02G00440.1-protein ID=NO02G00440.1-protein|Name=NO02G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bpback to top Synonyms
Publications
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