NO02G00440, NO02G00440 (gene) Nannochloropsis oceanica

Overview
NameNO02G00440
Unique NameNO02G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1626
Alignment locationchr2:152740..154365 -

Link to JBrowse

Properties
Property NameValue
DescriptionSh2 domain containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:152740..154365 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024983CHAT_dom
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Homology
BLAST of NO02G00440 vs. NCBI_GenBank
Match: EWM28181.1 (sh2 domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 235.7 bits (600), Expect = 2.100e-58
Identity = 128/238 (53.78%), Postives = 164/238 (68.91%), Query Frame = 0
Query:   64 RIAYLYSVPLIHRLGNVVHEPDV-----LDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN--GEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRP 295
            R+ YLYS PL+H+ G    E D+     +D GQEL  L+ TL ++ RR+ FRAEVATV+N R L+T+GCRMLHYTG G PSCLIFE E   GE N L+ E L++LF AGGVRT+LVFVSA HSE  G +F AAGV HVVA+K+D KV+D AA +FAE FYLS+  G TVR AF++  T+ + E+ VS  ++D++FLLLP DG HD+A+F +     A  G  +DE+P P    C   P
Sbjct:   62 RLGYLYSAPLVHKAGGQAKELDMQDGMHIDIGQELGRLKHTLHDAQRRILFRAEVATVKNCRKLLTIGCRMLHYTGIGKPSCLIFEKEKPVGETNVLSIETLTELFAAGGVRTQLVFVSARHSEIVGRAFIAAGVRHVVAMKWDAKVSDRAACIFAEFFYLSIAMGRTVRQAFEVASTAAVTETGVS--SEDEQFLLLPADGEHDLAVFDD-----AEMGEFVDESPPPVPNTCDPPP 292          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: CBJ30247.1 (SH2 domain containing protein [Ectocarpus siliculosus])

HSP 1 Score: 165.2 bits (417), Expect = 3.400e-37
Identity = 100/206 (48.54%), Postives = 128/206 (62.14%), Query Frame = 0
Query:   96 LRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN----GEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGN---TVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRP 295
            +R  L ESGR++ FR+EVA   NFR L+  GCRMLHYTGHG+   L FES +    G   PL    L +LF+AGGVRTELVF+S+C SE++G++F  AGVPHVVAVK +E VTD AA+ FA+QFY +L++     TV+ AF I + ++ A    +    D  FLLLP  GNHDV IF          G  +DET  P      +RP
Sbjct:    2 IRMKLRESGRQIRFRSEVAKPSNFRELLNSGCRMLHYTGHGSNEFLAFESNDDRMCGIMEPLHVGPLKNLFQAGGVRTELVFISSCSSEASGNAFVDAGVPHVVAVKREESVTDQAAQQFAKQFYDALLSEAGRFTVKQAFDIALNTVNAHPPHARPQGD-HFLLLPHGGNHDVRIFD-----TLPEGRFVDETREPPARPRCARP 201          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: OYV13256.1 (hypothetical protein CG446_203, partial [Methanosaeta sp. ASO1])

HSP 1 Score: 161.4 bits (407), Expect = 4.900e-36
Identity = 95/224 (42.41%), Postives = 131/224 (58.48%), Query Frame = 0
Query:   64 RIAYLYSVPLI-HRLGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGVR-TELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSV-SAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPA 285
            R+A LYS PLI       VH  ++LD   E + + K+L+++G  +  R++ AT  NFR +V LGC+ LH++GHG P  L FE   G A+ +  ++L +LF+AGG    ++VFVSACHS   G +F  AGV HVVAV+ +E V D AA  FA  FY +L    TV+ AF  G  ++     +     + +KFLLLPE G HDVAIF     A A  G   D +P+
Sbjct:    6 RLAMLYSSPLIWQNEKGQVHPIELLDFESEKEIISKSLMQTGISIEIRSDFATADNFRAMVVLGCQALHFSGHGLPGVLAFEDGRGGAHLIEADLLRELFQAGGPSGIQMVFVSACHSRQIGEAFVKAGVEHVVAVRLEEPVYDKAAANFARAFYQALAARKTVQQAFDSGRAAVKTTPHLPDTAFEAEKFLLLPEYGKHDVAIF-----ADAKKGDFTDSSPS 224          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: CBJ30255.1 (SH2 domain containing protein [Ectocarpus siliculosus])

HSP 1 Score: 160.2 bits (404), Expect = 1.100e-35
Identity = 101/238 (42.44%), Postives = 136/238 (57.14%), Query Frame = 0
Query:   64 RIAYLYSVPLIH--RLGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN----GEANPLTTEMLSDLFRAGG-VRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTG---NTVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDET-PAPSRTLC 291
            R+ ++++ PL+      N+  E   L T +EL+ +R  L   GR++ FRAEVA   N   L+  GC +LHY GHGN   L FES      G   PL  + L +LFR  G V+T+LVF+S+C SE++G+ F AAGVPHVVAVK +  VTD AAR FA  FY +L      +TV+ AF + +  + A    +  +++  FLLLP DGNHDV IF          G L+DET   P R  C
Sbjct:   21 RLGFIHAAPLVRFDHNRNMFRELKALRTCEELEFVRNKLRGFGRQIKFRAEVANAMNLTRLLHSGCLLLHYAGHGNDEYLAFESTTEWKCGIMEPLKVKYLKNLFRVDGIVKTQLVFISSCSSEASGNVFVAAGVPHVVAVKHNAGVTDGAAREFANVFYNALFENGGRSTVKQAFDMALNCVNATHLGAPKHEEDLFLLLPRDGNHDVRIFD-----TLPEGKLVDETHRLPPRPPC 253          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: XP_009035732.1 (hypothetical protein AURANDRAFT_63276 [Aureococcus anophagefferens] >EGB09688.1 hypothetical protein AURANDRAFT_63276 [Aureococcus anophagefferens])

HSP 1 Score: 146.4 bits (368), Expect = 1.600e-31
Identity = 116/319 (36.36%), Postives = 159/319 (49.84%), Query Frame = 0
Query:    8 LFSRKKKAKTGSTPAPTQPVPPQNGTTTTHTGNISATASTSLSSIIASPSLNGVGPRIAYLYSVPLIHRL--GNVVHEPDVLDTGQ-ELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESE-NGEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRPSFSSVATLRSRNASPSSTPPSVPLRDRA 323
            L+ R++  KT      ++ VP          G  + + ST       SP  +G   R+ YL + PL++R   G+    P V      E+  L+  L  S   + FR+ VATV   R L+T+GC  LH++GHG P  L FE E   E   +  + L  LF AGG R  LVF +AC SE AG +F A  VPHV+ V+ D ++ D AAR  AEQFY +++ G TVR AF IGV ++ A  +         +LLLPEDG+HDV +   G DA+  +G +   T  P      SRP+           A+ S   P  PL  RA
Sbjct:  793 LWMRRRSKKT------SKVVPTMKTLVVAPAGTPTRSISTETCGTPTSP-FDGQPFRLGYLCAEPLVYRKPDGSFGALPPVQSRRDGEVSLLKAVLARSETAVRFRSAVATVTELRSLLTVGCDALHFSGHGLPRSLSFELEGRAELTMVGHDRLEALFAAGGHRARLVFAAACKSEFAGRAF-ARHVPHVICVRVDARLGDRAARDMAEQFYAAILRGRTVREAFDIGVAAVGAAGAA--------YLLLPEDGDHDVPLV-RGDDASLVAGDVALATARPGALRDESRPA-----------AASSCPAPPAPLFGRA 1083          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: XP_005854758.1 (sh2 domain containing protein [Nannochloropsis gaditana CCMP526] >EKU21603.1 sh2 domain containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 144.8 bits (364), Expect = 4.800e-31
Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 0
Query:   65 IAYLYSVPLIHR-LGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSV-SAHNDDKKFLLLPEDGNHDVAIF 266
            ++ L+S PL  R L   +H  ++L   QE + L ++L+ESG  +  R +  T    R  VTLG R LHY+GHG+ + L FE   G    +  +ML  L  AG  + +LV VS+C+S+ AG +F  A VPHVV +  +  +TD AA  F + FYLSL  GNTV+++F IG  ++ A  +V S   +  KF LLPE  +H+VAIF
Sbjct:  573 LSVLFSAPLAWRDLEGNLHPIELLFFDQEREQLVQSLMESGSDICARFDFCTTDTLRSAVTLGARALHYSGHGHRNLLTFEDGAGGLQLVPVDMLRSLCAAGSHKLDLVVVSSCYSKLAGQAFVDAEVPHVVCINLEATITDSAALAFTKAFYLSLFVGNTVQHSFAIGQQAVAASPNVPSPEREVSKFELLPEGCDHNVAIF 775          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: EWM22665.1 (sh2 domain containing protein [Nannochloropsis gaditana])

HSP 1 Score: 144.8 bits (364), Expect = 4.800e-31
Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 0
Query:   65 IAYLYSVPLIHR-LGNVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSV-SAHNDDKKFLLLPEDGNHDVAIF 266
            ++ L+S PL  R L   +H  ++L   QE + L ++L+ESG  +  R +  T    R  VTLG R LHY+GHG+ + L FE   G    +  +ML  L  AG  + +LV VS+C+S+ AG +F  A VPHVV +  +  +TD AA  F + FYLSL  GNTV+++F IG  ++ A  +V S   +  KF LLPE  +H+VAIF
Sbjct:  613 LSVLFSAPLAWRDLEGNLHPIELLFFDQEREQLVQSLMESGSDICARFDFCTTDTLRSAVTLGARALHYSGHGHRNLLTFEDGAGGLQLVPVDMLRSLCAAGSHKLDLVVVSSCYSKLAGQAFVDAEVPHVVCINLEATITDSAALAFTKAFYLSLFVGNTVQHSFAIGQQAVAASPNVPSPEREVSKFELLPEGCDHNVAIF 815          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: GBG26340.1 (Ran-binding protein 9, partial [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 139.8 bits (351), Expect = 1.500e-29
Identity = 96/272 (35.29%), Postives = 135/272 (49.63%), Query Frame = 0
Query:   19 STPAPTQPVPPQNGTTTTHTGNISATASTSLSSIIASPSLNGVGPRIAYLYSVPLIHRLGNVVHEPD-------VLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAGGV------RTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSA------------HNDDKKFLLLPEDGNHDVAIF 266
            + P+PT       G + + +GN     +  +  +I     +G  PR++ L+S+PL+H        PD        ++   E   L +T  ++ R +      AT+   R  VTL  R +HY+GHG+   L+FE + G A P+ T +L DL  AGG       + +L FVSACHSE AG +F  AGVPHVV VK  E++ D AA+ F   FYL L  G TVR AF +   ++ A+                      KFLLLP+D NHDV IF
Sbjct: 2242 ANPSPTS----GGGPSLSGSGNGDVMMNPMVHDMI-QDERDGFRPRLSVLFSIPLVH------FGPDGQPMACASIEYEAERHMLMQTFQDAKRDINLSFGFATMDRLRSEVTLRSRAIHYSGHGSRDALLFEDQIGGARPVATSVLRDL--AGGASGSKMSKVKLAFVSACHSEFAGQAFIDAGVPHVVCVKVAERIQDTAAQAFTRWFYLELAIGGTVRKAFDVATQAVRAQEQARVGGVAASMAPSIRPEQASKFLLLPKDANHDVPIF 2500          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: XP_002291856.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90707.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 139.4 bits (350), Expect = 2.000e-29
Identity = 91/239 (38.08%), Postives = 131/239 (54.81%), Query Frame = 0
Query:   33 TTTTHTGNISATASTSLSSIIASPSLNGVGPRIAYLYSVPLIHRLG-NVVHEPDVLDTGQELQSLRKTLIESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEANPLTTEMLSDLFRAG-GVRT---ELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDD-KKFLLLPEDGNHDVAIF 266
            TT   T NI+A   T  +     P + G    I  L+S PL+ R G N  H  ++LD   E   L +   E+ R +    + AT    +  +T GC  LH++GHG+P  L FE  +G  + L+ E L  L   G G R    + VFVSACHS  AG +F  AGVPHVV  + + ++ D AA  F   FY +L  G ++++AF++G  ++     V+  +++ KKF+LLP+DGNHDVAIF
Sbjct: 1741 TTLVSTDNINALQLTHSAGSKQIPFVGG-NNTITVLFSAPLVWRDGENEYHPIELLDFELEKSLLWQCFSEASRSIDLSYDNATTDRLQSALTKGCGCLHFSGHGHPQFLTFEDGSGGIHWLSVEQLQSLVSVGTGNRDPPFKFVFVSACHSGLAGQTFVDAGVPHVVCCQQESQLMDSAAVSFTRAFYFALALGRSLKDAFEMGKQAVSCSPVVTNPSEEMKKFMLLPQDGNHDVAIF 1978          
BLAST of NO02G00440 vs. NCBI_GenBank
Match: ETO12905.1 (hypothetical protein RFI_24470, partial [Reticulomyxa filosa])

HSP 1 Score: 138.3 bits (347), Expect = 4.500e-29
Identity = 75/165 (45.45%), Postives = 107/165 (64.85%), Query Frame = 0
Query:  107 LTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESEN--GEANPLTTEMLSDLFRAGGV-RTELVFVSACHSESAGHSFAAAGVPHVVAVKFDEKVTDYAARVFAEQFYLSLVTGNTVRNAFQIG---VTSIMAESSVSAHNDDKKFLLLPEDGNHDVAIF 266
            + F+ + AT  + R LV++  R++HY+GHG P+ L+ ES++  G AN +++  L DL   GG    +LVFVSACHS + GH+F  AG  HVV V  +++V D AA+ F  QFY +LV G TV+ AF IG   + + + E S+ A N+ +KFLLLPED  HDV +F
Sbjct:   11 IRFKEDFATAESIRELVSMSTRVIHYSGHGVPNQLVLESDDDIGIANKMSSTQLRDLITTGGAPNLDLVFVSACHSFATGHAFVQAGAKHVVCVTQNDRVLDKAAKQFTYQFYFNLVAGKTVQEAFDIGRQVLKTDLHEDSL-AQNESEKFLLLPEDERHDVVLF 174          
The following BLAST results are available for this feature:
BLAST of NO02G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28181.12.100e-5853.78sh2 domain containing protein [Nannochloropsis gad... [more]
CBJ30247.13.400e-3748.54SH2 domain containing protein [Ectocarpus siliculo... [more]
OYV13256.14.900e-3642.41hypothetical protein CG446_203, partial [Methanosa... [more]
CBJ30255.11.100e-3542.44SH2 domain containing protein [Ectocarpus siliculo... [more]
XP_009035732.11.600e-3136.36hypothetical protein AURANDRAFT_63276 [Aureococcus... [more]
XP_005854758.14.800e-3141.38sh2 domain containing protein [Nannochloropsis gad... [more]
EWM22665.14.800e-3141.38sh2 domain containing protein [Nannochloropsis gad... [more]
GBG26340.11.500e-2935.29Ran-binding protein 9, partial [Aurantiochytrium s... [more]
XP_002291856.12.000e-2938.08predicted protein [Thalassiosira pseudonana CCMP13... [more]
ETO12905.14.500e-2945.45hypothetical protein RFI_24470, partial [Reticulom... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006628NSK006628Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00440.1NO02G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00440.1NO02G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00440 ID=NO02G00440|Name=NO02G00440|organism=Nannochloropsis oceanica|type=gene|length=1626bp
ATGCCTGTAACGTTCCAGGGGCTTTTCAGTCGGAAAAAGAAGGCCAAAAC
CGGGTCTACCCCTGCCCCGACTCAGCCTGTCCCCCCACAAAATGGAACTA
CCACTACTCATACTGGCAACATCTCTGCCACGGCATCAACGTCTCTCTCT
TCCATCATTGCCTCCCCATCCCTCAACGGTGTTGGGCCTCGCATCGCCTA
CTTGTACAGCGTCCCGCTCATCCATAGACTGGGTAATGTCGTCCATGAGC
CCGACGTCCTGGACACAGGGCAAGAGCTCCAGTCCTTGCGCAAGACCCTC
ATCGAGTCCGGCCGCCGTCTGACCTTCCGTGCTGAGGTTGCTACCGTGCG
TAATTTCCGCTTTCTCGTCACCCTCGGCTGTCGCATGCTGCACTATACCG
GTCACGGAAACCCATCTTGCTTGATCTTCGAGAGTGAAAATGGGGAGGCT
AATCCCTTAACTACAGAGATGCTTAGCGACCTCTTCCGAGCCGGGGGCGT
GCGGACAGAGCTGGTGTTTGTCTCCGCATGTCATTCCGAGTCGGCGGGGC
ATTCATTCGCGGCTGCGGGGGTGCCCCATGTGGTGGCGGTCAAGTTCGAC
GAGAAAGgtccgttcaatagtagaagaatatgaacaaggggaggggtaga
aaagccacgaggtgcaacgtgaaacggaatggattctgaagctggtagat
ttatattgtgggaaagacatagagagagaatgagagagaggaagggtagg
cttgttctcatgagacatgtctcaggcgccgaagacagcaggttgaatat
aacacgcttgtttgtttgtttcgcatgcgaccccgcctaacaccctttct
ccctccctccctctctcccttccccgtctgccatcagTCACCGACTACGC
CGCCCGTGTCTTCGCCGAGCAGTTCTATCTCAGCCTCGTCACGGGCAACA
CAGgtacgtccttcttcctctcctcctcctcctcctcctcctcctcctcc
tcctcctcctcctcctccccctctcagccactcgcccaacttcccccacc
tatccctcattctctccctccctacctccctacctccctacctccctcca
gTCCGCAACGCCTTCCAAATCGGTGTTACATCTATCATGGCCGAATCGTC
TGTCTCTGCCCACAACGACGACAAGAAGTTCCTTTTATTACCCGAAGACG
GGAACCATGACGTGGCCATATTCGGCGAGGGCACTGACGCCGCCGCTTAC
TCAGgtagggagggaaggagggagggaggaaagagcggagagatgaacaa
ggagagggagggaggagagtcaggtgagagactacggggggactttgccc
agcaggttttctcgctagtctcttttcgtccgtcatgatgcaccgtcctc
accgacaatcaccaccctccctccctccctcccttcagGCACCCTCTTGG
ATGAAACCCCCGCCCCGTCACGAACACTGTGCACAAGCCGCCCGTCTTTT
TCCTCGGTCGCAACGCTAAGGTCCAGGAATGCGTCGCCCTCCTCCACCCC
CCCATCGGTACCGCTGCGTGACCGTGCGAGGCGAGCCCGGCATCGGCAAA
ACAGCCTTGGGCTTCCGTGTCTGTGA
back to top

protein sequence of NO02G00440.1

>NO02G00440.1-protein ID=NO02G00440.1-protein|Name=NO02G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MPVTFQGLFSRKKKAKTGSTPAPTQPVPPQNGTTTTHTGNISATASTSLS
SIIASPSLNGVGPRIAYLYSVPLIHRLGNVVHEPDVLDTGQELQSLRKTL
IESGRRLTFRAEVATVRNFRFLVTLGCRMLHYTGHGNPSCLIFESENGEA
NPLTTEMLSDLFRAGGVRTELVFVSACHSESAGHSFAAAGVPHVVAVKFD
EKVTDYAARVFAEQFYLSLVTGNTVRNAFQIGVTSIMAESSVSAHNDDKK
FLLLPEDGNHDVAIFGEGTDAAAYSGTLLDETPAPSRTLCTSRPSFSSVA
TLRSRNASPSSTPPSVPLRDRARRARHRQNSLGLPCL*
back to top
Synonyms
Publications