NO02G00430, NO02G00430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00430 vs. NCBI_GenBank
Match: EWM28181.1 (sh2 domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 270.4 bits (690), Expect = 1.500e-68 Identity = 218/688 (31.69%), Postives = 296/688 (43.02%), Query Frame = 0 Query: 2 FDALYQVSLGETHFHPSDKETLCETVGTALGVGGARNCRDLLRALQGPDPSRRILLLLDGIDRFLTHGSALIPVLSFVLGKHHGLHLLLTAEGSLNDNGDGLLESTPEKVVELGALSPTNAAHLLVYVAPRRLRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHPTSHPIPLAAAKTEALTQLSSSPVLRELHGHPKAILAFAPLLEGHRLEGLNDRAKRCYRQASS--------------------------------HRGWGGRERGGEDERLKLGRGMMSSMLLVEKEEEEACALNQFNFKDGACAKLWAELTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLGVPWYRLAAALQAQLKEMLLRESGLRTHQPSTSLPDAEKGLASTSLSRDSMPSGLSTLIGDGRGHNPRIGNNRGLTTACSTSSGQQEHWQQRRLSGQADASLLSHGAGAWRGSGERLRMLDG-VRGLSDTDITFLRAKLALQ-PKSDMVRAQDFEAFSHWWVPMMSTLKQLAREWLIETPTPLIMGIIGRKEAEGLLRKKPIGTFLIRFSTTHLGLLAISFVVAPPPXXXXXXXXXXXXXXXXXXXKLIQHCLVRVSE-MGCELFMEPGRRRYEKLEDLINDVASLTHLYPDTPKERALQALQR 655 FDA+Y V L + +KETLC+ +G A+G A N R+++ LQ PS R++++LDG DRF ++L+ VLS++L + HGLHLL+TAEGS+ +G G LES+ EKVV LG LS AH+L +AP EE S P A + EA +L++SPV+REL GHPKAI+ FAPLLE HRLE L D+AK+CY AS G DE+ +L L + +E EEA QF ++ +LW E+ + GVPWYRL ALQ +L++ L+ DA + LSR + +T H GN + + E Q +++ A S+ DG +RGL DI F++ +L ++ P+SD+VR DF F WVP +++ L REWL P L+ G + RKE E LL+ GTFL RFST+HLGLL++SFV I+H LV+V E C +FMEPGR R+ LEDLI ASL YP PK AL ++R Sbjct: 346 FDAIYMVPLRRKEYRSYEKETLCKVIGAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEM-------------------------------------------------MSRPY---ATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLEDLYDKAKQCYVDASQVVEVDTPSMGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAENGRDEKREL------DALALARETEEA---RQF-LREPTSQRLWLEVV---------------------------------RQGGARQSSSMHQGVPWYRLTDALQEELRKALI---------------DALR------LSRFHIEDFCAT-------HCSTNGNGGAEGSKAFSPPAVSETKQDSKVADGATISIADK---------------DGTIRGLEPGDIQFIKDRLVIRTPESDLVRITDFAVFCEGWVPAQNSIALLCREWLCNKPR-LLHGFLSRKETEALLQGYKEGTFLFRFSTSHLGLLSLSFV-----GKSRKNYPNDEEGEKKAKALHIRHFLVQVEEDRRCVVFMEPGRSRHASLEDLIMSSASLLEFYPGVPKAHALTQMRR 889
BLAST of NO02G00430 vs. NCBI_GenBank
Match: EWM30623.1 (transcriptional repressor [Nannochloropsis gaditana]) HSP 1 Score: 201.4 bits (511), Expect = 8.800e-48 Identity = 113/179 (63.13%), Postives = 137/179 (76.54%), Query Frame = 0 Query: 476 VRGLSDTDITFLRAKLALQPKSDMVRAQDFEAFSHWWVPMMSTLKQLAREWLIETPTPLIMGIIGRKEAEGLLRKKPIGTFLIRFSTTHLGLLAISFVVAPPPXXXXXXXXXXXXXXXXXXXKLIQHCLVRVSEMGCELFMEPGRRRYEKLEDLINDVASLTHLYPDTPKERALQALQR 655 +R LSD DI FLR+KLA Q SDMV A+DFEAF WW + S L+ + REWL E PTP+++G GRKE+E L++KP GTFL+RFST+HLGLLAISF VAPPP XXXXXXXXXXX IQHCLVRV+E GCELFMEPGR+RY+ L+ L+ D+A+LT YPD PK+ LQAL++ Sbjct: 1 MRVLSDHDIMFLRSKLATQANSDMVMAKDFEAFWQWWSLVFSALEIIYREWLCEAPTPVVIGFSGRKESEAALKEKPSGTFLLRFSTSHLGLLAISF-VAPPPSPSAXXXXXXXXXXXVGPP--IQHCLVRVTEKGCELFMEPGRKRYDDLQALLEDIATLTLFYPDVPKQDVLQALRK 176
BLAST of NO02G00430 vs. NCBI_GenBank
Match: XP_005852744.1 (sh2 domain containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU23087.1 sh2 domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 164.1 bits (414), Expect = 1.600e-36 Identity = 96/242 (39.67%), Postives = 129/242 (53.31%), Query Frame = 0 Query: 2 FDALYQVSLGETHFHPSDKETLCETVGTALGVGGARNCRDLLRALQGPDPSRRILLLLDGIDRFLTHGSALIPVLSFVLGKHHGLHLLLTAEGSLNDNGDGLLESTPEKVVELGALSPTNAAHLLVYVAPRRLRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHPTSHPIPLAAAKTEALTQLSSSPVLRELHGHPKAILAFAPLLEGHRLEGLNDRAKR 244 FDA+Y V L + +KETLC+ +G A+G A N R+++ LQ PS R++++LDG DRF ++L+ VLS++L + HGLHLL+TAEGS+ +G G LES+ EKVV LG LS AH+L +AP EE S P A + EA +L++SPV+REL GHPKAI+ FAPLLE HRLE L D+AK+ Sbjct: 204 FDAIYMVPLRRKEYRSYEKETLCKVIGAAIGFEDASNEREIVFLLQDKHPSGRVIMVLDGPDRFFNRSNSLVQVLSYLLSRIHGLHLLVTAEGSVLGSGSGRLESSSEKVVHLGPLSDVATAHMLANIAPPGFDLEEM-------------------------------------------------MSRPY---ATREEAYAELAASPVIRELRGHPKAIVMFAPLLEDHRLEDLYDKAKQ 393
BLAST of NO02G00430 vs. NCBI_GenBank
Match: CBJ30253.1 (SH2 domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 79.7 bits (195), Expect = 3.900e-11 Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 0 Query: 498 DMVRAQDFEAFSHWWVPMMSTLKQLAREWLIETPTPLIMGIIGRKEAEGLLRKKPIGTFLIRFSTTHLGLLAISFV---VAPPPXXXXXXXXXXXXXXXXXXXKLIQHCLVRVSEMG--CELFMEPGRRRYEKLEDLINDVASLTHLYPDTPKERA 649 D + + F FS WW P++STL + +W P + G + R A+ LL ++ GTFL+RFS + +G L ISF V+P ++H LV V G C + G R Y L D + + L LYPD PKE A Sbjct: 755 DFISVEAFAKFSQWWAPLISTLGIIRNDWARTRPV-RVHGFMSRLAAKRLLMQRECGTFLLRFSESKMGALVISFTQPSVSP-----------------GRRSLSVKHSLVEVKWGGRCCIQAEKGGMRCYASLHDFVRRIPELKKLYPDIPKEEA 892
BLAST of NO02G00430 vs. NCBI_GenBank
Match: CBJ30247.1 (SH2 domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 77.0 bits (188), Expect = 2.500e-10 Identity = 52/148 (35.14%), Postives = 68/148 (45.95%), Query Frame = 0 Query: 505 FEAFSHWWVPMMSTLKQLAREWLIETPTPLIMGIIGRKEAEGLLRKKPIGTFLIRFSTTHLGLLAISFV--VAPPPXXXXXXXXXXXXXXXXXXXKLIQHCLVRVSEMG-CELFMEPGRR-RYEKLEDLINDVASLTHLYPDTPKERA 649 F FS WW P+M TL L +W PT + G I R AE L ++ GTFL+RFS + G L +SF V ++HCLV V G C + +E G + Y L DL+ +S+ LYPD KE A Sbjct: 793 FVEFSLWWAPLMPTLSLLRNDWASTNPT-RVHGFISRIAAERQLLERERGTFLLRFSESQPGELVVSFTEHVTQAAPRASSMLTSAPRSRPRSQSMCVKHCLVEVRRGGWCYIEVEQGSKVPYPSLHDLVLACSSMQVLYPDVRKEDA 939 The following BLAST results are available for this feature:
BLAST of NO02G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00430 ID=NO02G00430|Name=NO02G00430|organism=Nannochloropsis oceanica|type=gene|length=3197bpback to top protein sequence of NO02G00430.1 >NO02G00430.1-protein ID=NO02G00430.1-protein|Name=NO02G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=688bpback to top Synonyms
Publications
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