NO02G00380, NO02G00380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO02G00380 vs. NCBI_GenBank
Match: EWM30624.1 (hypothetical protein Naga_100440g1 [Nannochloropsis gaditana]) HSP 1 Score: 172.9 bits (437), Expect = 1.900e-39 Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0 Query: 127 SPHDSPAITYWIKDSLYVALTNRCNTIPLHATRGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKG 230 SP + P +TYWIKD+LYVA+TNRCNT+PLH TRGPGFS+ DF PLPPS+EPSE+EL+ S++GALAASHSLLNR WTEVCFAGWGEPTLRW T A + R G Sbjct: 88 SPGEGPMLTYWIKDTLYVAVTNRCNTVPLHVTRGPGFSMGDFSPLPPSYEPSEDELMASITGALAASHSLLNRAWTEVCFAGWGEPTLRWPTAAAAPEHERFG 190
BLAST of NO02G00380 vs. NCBI_GenBank
Match: GBE14026.1 (putative deoxyribonuclease YcfH [bacterium BMS3Abin14]) HSP 1 Score: 85.9 bits (211), Expect = 3.000e-13 Identity = 71/254 (27.95%), Postives = 106/254 (41.73%), Query Frame = 0 Query: 136 YWIKDSLYVALTNRCNTIPLHATRGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPYFE 390 Y I+DS+Y+ +T +C + + R ++ L +PS EE+L ++ A S EV F G+GEPT+R +L A+ LR+ NTNGLG++ R I E+A + V+V++N DA ++ L P EA + + S A + + IT VD PDVD++A RA+A+ MGA FRVRP E Sbjct: 272 YTIRDSVYLNVTGKCTSACVFCRRSANPVVKG-HDLMLESDPSVEEMLAALEDEGYAERS-------EVVFCGYGEPTIRLEEILEAARRLRE------------------QGAMHIRLNTNGLGSLYHGRDITPEIAGIMDEVSVSLNAQDAGTFERLCRPSFG-EVSYEAAKDFARSCLAAD----------------------------------MDVLITVVDHPDVDIDACRAIAEGMGARFRVRPLNE 464
BLAST of NO02G00380 vs. NCBI_GenBank
Match: OGR73051.1 (hypothetical protein A2179_01070 [Elusimicrobia bacterium GWC2_63_65]) HSP 1 Score: 80.9 bits (198), Expect = 9.800e-12 Identity = 74/268 (27.61%), Postives = 103/268 (38.43%), Query Frame = 0 Query: 130 DSPAITYWIKDSLYVALTNRCNTIPLHAT--------RGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPYFE 390 + P I Y +D LYV LTNRC T + RG +L EP+ E++ AS ++ E+ F G+GEPT+R +LA A+ +R G NTNGL N R +V E+ +SV V++NTAD AQ+ LM P + P+ + F + TAVD DVD+E + LA +GA+ RVRP E Sbjct: 4 NKPTIVYRYRDGLYVNLTNRCPTACVFCIKTAWKMDYRGSDLNL-------GGAEPAPAEIIALAKKEWEAS------QFRELVFCGFGEPTMRLEAMLACARLIRNGR------------AEPLPRNLRIRLNTNGLANAVWGRNVVPEMKGLIDSVHVSLNTADPAQWAALMRP----------MEPWAATGFEKVKEFIREAALLLP-----------------------EAFATAVDNGDVDLEKFKELAARLGAEPRVRPRLE 213
BLAST of NO02G00380 vs. NCBI_GenBank
Match: OGR52898.1 (hypothetical protein A2049_07285 [Elusimicrobia bacterium GWA2_62_23]) HSP 1 Score: 80.5 bits (197), Expect = 1.300e-11 Identity = 74/268 (27.61%), Postives = 103/268 (38.43%), Query Frame = 0 Query: 130 DSPAITYWIKDSLYVALTNRCNTIPLHAT--------RGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPYFE 390 + P I Y +D LYV LTNRC T + RG +L EP+ E++ AS ++ E+ F G+GEPT+R +LA A+ +R G NTNGL N R +V E+ +SV V++NTAD AQ+ LM P + P+ + F + TAVD DVD+E + LA +GA+ RVRP E Sbjct: 4 NKPTIVYRYRDGLYVNLTNRCPTACVFCIKTAWKMDYRGSDLNL-------GGAEPAPAEIIALAKKEWEAS------QFRELVFCGFGEPTMRLEAMLACARLIRNGR------------AEPLPRNLRIRLNTNGLANAVWGRNVVPEMKGLIDSVHVSLNTADPAQWAALMRP----------MEPWAATGFEKVKEFIREAALLLP-----------------------EAFATAVDSGDVDLEKFKELAARLGAEPRVRPRLE 213
BLAST of NO02G00380 vs. NCBI_GenBank
Match: WP_029917773.1 (radical SAM protein [Pelobacter seleniigenes]) HSP 1 Score: 79.3 bits (194), Expect = 2.900e-11 Identity = 67/259 (25.87%), Postives = 105/259 (40.54%), Query Frame = 0 Query: 131 SPAITYWIKDSLYVALTNRCNTIPLHATRGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPYFE 390 S I Y I+DSLY+ +TNRC + T+ F ++ L EPS EE++ ++ + ++EV F G+GEP LR + +A L+K NT+G N+ R I+ ELA +SV+V++N D A Y +L ++ A A++ +L + + +AV P VD+EA +A+ +G DFR R Y E Sbjct: 266 SHKIAYKIRDSLYLNITNRCTNSCIFCTKFRDFIVKG-HELKLDHEPSAEEVIAAIGDP---------KHYSEVVFCGYGEPLLRLELIKTIAAWLKK-------------------QGIKVRINTDGQANLVYGRNILPELAGLIDSVSVSLNAPDEATYQSLCQSSYGSKSYA-AVKDFLRQA----------------------------------AQVIPEVTASAVSYPGVDMEACSRVAQELGVDFRAREYNE 460
BLAST of NO02G00380 vs. NCBI_GenBank
Match: KPL02367.1 (hydrolase TatD [Planctomycetes bacterium SM23_65]) HSP 1 Score: 77.8 bits (190), Expect = 8.300e-11 Identity = 76/262 (29.01%), Postives = 110/262 (41.98%), Query Frame = 0 Query: 127 SPHDSPAITYWIKDSLYVALTNRCNTIPLHATRGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLR-KGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPY 388 S +S + Y I++SLY+ +TNRC+ TR ++ R L EP SV G +AA + + EV F G+GEPT R + VA+ ++ +G R TNG G++ R I +ELA + ++V+VNTAD QYD+L +A AI ++ + A + +ITAV P VD++AV LAK MG FR R Y Sbjct: 258 SADESGKVAYVIRNSLYLNITNRCSNRCTFCTRQKNAYVKGHR-LWLDREP-------SVEGIIAACGDI--SHYDEVVFCGYGEPTERLDALKEVAKWVKSRGQRVRIV--------------------TNGEGDLINGRPIAAELAGLVDKLSVSVNTADPEQYDSLCRSVFGPKAH-PAILKFIEGAKA----------------------------------HVPEIEITAVSCPGVDIKAVELLAKKMGVAFRARRY 454
BLAST of NO02G00380 vs. NCBI_GenBank
Match: OGR79178.1 (hypothetical protein A2X32_11725 [Elusimicrobia bacterium GWC2_64_44]) HSP 1 Score: 77.4 bits (189), Expect = 1.100e-10 Identity = 72/264 (27.27%), Postives = 102/264 (38.64%), Query Frame = 0 Query: 132 PAITYWIKDSLYVALTNRCNTIPLHATRGP------GFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPYFE 390 P I Y LYV LTNRC T + + G L D R EP+ E+L AA ++E+ F G+GEPT+R +LA A+ +R G NTNGL N R +V E+ +SV V++NT+D Q+ +M P + P+ + F +T TAV+ P +D A RALA+ +GA+ R+RP E Sbjct: 6 PVIVYRYGSGLYVNLTNRCPTACVFCVKNAWKMDYRGSDL-DLR----GAEPAPAEVLALAKTEWAAG------PFSELVFCGYGEPTMRLEALLACARLIRNGR------------AEPVPKDLRIRLNTNGLANAVWGRNVVPEMKGLIDSVHVSLNTSDPEQWRAVMRP----------LEPWAATGFEKVKEFIREAALLLP-----------------------ETVATAVEGPALDAAAFRALAEKLGAEVRLRPRLE 213
BLAST of NO02G00380 vs. NCBI_GenBank
Match: OGR45337.1 (hypothetical protein A2X35_03600 [Elusimicrobia bacterium GWA2_61_42] >OGR77664.1 hypothetical protein A2X38_09840 [Elusimicrobia bacterium GWC2_61_25]) HSP 1 Score: 76.6 bits (187), Expect = 1.900e-10 Identity = 70/263 (26.62%), Postives = 102/263 (38.78%), Query Frame = 0 Query: 132 PAITYWIKDSLYVALTNRCNTIPLHAT--------RGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRP 387 P++ Y K+ LYV LTNRC T + RG L EPS E++ AA+ + E+ F G+GEPT+R +L A+ +++G NTNGL N R +V E+ +SV V++NT+D AQ+ LM P + P+ + F +T TAV+ VD+E +ALA +GA+ RVRP Sbjct: 6 PSVVYRYKNGLYVNLTNRCPTACVFCVKNAWKMDYRGSNLDLS-------GAEPSPAEIIALAGKEWAAA------PFEELVFCGFGEPTMRLEALLTTARLVKRGK------------APPIPPATRVRLNTNGLANAVWGRNVVPEMKGLIDSVHVSLNTSDPAQWAALMRP----------MEPWAATGFEKVKEFIREASLLLP-----------------------ETFATAVEGNGVDIEQFKALAVKLGAEPRVRP 210
BLAST of NO02G00380 vs. NCBI_GenBank
Match: KPL05233.1 (hypothetical protein AMJ85_12075 [candidate division BRC1 bacterium SM23_51]) HSP 1 Score: 76.3 bits (186), Expect = 2.400e-10 Identity = 72/256 (28.12%), Postives = 104/256 (40.62%), Query Frame = 0 Query: 133 AITYWIKDSLYVALTNRCNTIPLHATRGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLRKGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAK-VMGADFRVRPY 388 +I Y + DSLY+ LTNRC + R L ++ P EPS E++ ++ A H EV F G+GEPT+R +L V Q L+ NTNG GN R IV+ELA + V+V++N A A++Y L P R + + + ++ + A + +AV P VD+EA RALA+ +G FR RPY Sbjct: 245 SIAYVLGDSLYLNLTNRCTNDCVFCARTTACRLGEYDLRLPR-EPSAAEIIAAIGDRPDAFH--------EVVFCGYGEPTIRLEPLLWVGQWLK------------------AHGVKRVRLNTNGHGNAIHGRSIVNELASVVDVVSVSLNAAAASEYTRLCRPS-EARFDFDEVCRFIAEAKA----------------------------------AIGEVVASAVAYPGVDLEACRALAEDTLGVCFRRRPY 438
BLAST of NO02G00380 vs. NCBI_GenBank
Match: OGL48753.1 (radical SAM protein [Candidatus Schekmanbacteria bacterium RIFCSPHIGHO2_02_FULL_38_11] >OGL49310.1 radical SAM protein [Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_02_FULL_38_14] >OGL51370.1 radical SAM protein [Candidatus Schekmanbacteria bacterium RIFCSPLOWO2_12_FULL_38_15]) HSP 1 Score: 75.9 bits (185), Expect = 3.200e-10 Identity = 66/259 (25.48%), Postives = 106/259 (40.93%), Query Frame = 0 Query: 132 PAITYWIKDSLYVALTNRCNTIPLHATRGPGFSLEDFRPLPPSFEPSEEELLCSVSGALAASHSLLNREWTEVCFAGWGEPTLRWATVLAVAQGLR-KGNRAXXXXXXXXXXXXXXXXXXXXXXNTNGLGNVAQQRKIVSELAEAFESVTVAVNTADAAQYDTLMHPDLTMRAEAEAIRPYLTSSFADESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTQITAVDRPDVDVEAVRALAKVMGADFRVRPYFE 390 P I Y I++SLY+ +T+RC + R + + L + EPSEEEL+ S+ + ++ E+ F G+GEP L+ TV V++ ++ KG + NTNG GN+ +R I+ EL +S++V++N +Y TL H +A E I+ F E ++ V DV+V+ + +A +G FRVR Y E Sbjct: 259 PEIAYRIRNSLYLNVTSRCTNECIFCERN-NYPIVKGHYLKLNTEPSEEELISSIGNPV---------KYDEIVFCGYGEPLLKLETVKNVSKWIKEKGGKV--------------------RINTNGQGNLIHKRNIIPELKGLVDSISVSLNAETGEKYHTLCHSMFGPKAYEEIIK------FVRECKNHIP-----------------------------SVTVSIVGMRDVNVDECKKIADELGVGFRVREYNE 452 The following BLAST results are available for this feature:
BLAST of NO02G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00380 ID=NO02G00380|Name=NO02G00380|organism=Nannochloropsis oceanica|type=gene|length=4614bpback to top protein sequence of NO02G00380.1 >NO02G00380.1-protein ID=NO02G00380.1-protein|Name=NO02G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=390bpback to top Synonyms
Publications
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