NO02G00300, NO02G00300 (gene) Nannochloropsis oceanica

Overview
NameNO02G00300
Unique NameNO02G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1713
Alignment locationchr2:107305..109017 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:107305..109017 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006605NSK006605Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00300.1NO02G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|569658gene_10189Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100568g4gene35Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00300.1NO02G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00300 ID=NO02G00300|Name=NO02G00300|organism=Nannochloropsis oceanica|type=gene|length=1713bp
AGGGTCTCGAACACCATGCTGCTACAAACCCGCGGTCACAGTTTGCTGCT
AGTAGTTCTGACTACAATTGTACTCTTTCTAACCCCGGTTGCCTCCCAGG
CCCTCATTGGAGCGGACCATCGCGGgtaagtgttggcgtgagggagtgtg
ggtgtggcttgtggcttgattagatgacaaggcaggacatgaaagtagcc
gcaccagtgcgcgtactcgtaatggatctccaatagatacgttgtaatgg
cctgtgcatgtaggatttgcaagagagaatcttcgagagtgtatctcatg
cactagagccaggaccccttggtgagcatgtagatgcatcggcaggagga
aagaggacacacgcacgcttgtgtgccgcatattgtcttcacgaagacag
ggcttttattgactttaatccactctctcacaaatataaaacagGCTGGA
TGCTGGGCGTGTGTTTCGGCCTTTGCAGGCCGCGGGCGTCACCGGCGGAG
AGGCAGCCCTGAAGAAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAATCA
AGCATTCTTTCTGCGGATTTTGATGAAAAGTCAACGACGACGGAGAGAGA
TACAGCTGTAGCCGCCGCGGGCGCTGCTAAGAGCGCTGGATCCCGAGCCG
CTGCTGCAGCCGCTGCTGGTCTACCAGTCAACGTACAGCAGCAGGAGCAA
CTCCAACCGCCATCCCCACGATTCTTAGCCGTAAAGAAGAAAGAGCAGAC
CTTGCCATCCTCTACGTCCACATCAGCCGAAGCTAAAGAAGCTATCACCG
GGTCTTCTCCTTCCTCTTTGCTTTCTCCCTCTTCCTCCTCCTCGACTGTC
CCCTCGCGGAAGCTGCAGCAAACCATCGAACATCTGGCCAGGCGTTCACC
GGCCCCTCTAGAGCCCAAGGACATTCGCCCCGTGAGCAAGAAGGAAGGGA
GTGCCTGGGCAGAGAAGACGACAAAGAAGGAAGGAAGAGCGTTCTTCAAC
AAGTTTGATGGCGAGGCGAAAAGTGCAACTGAGGACCAGGACGAGAAGAA
GAAACGATGGAAGGTGGAAGTTGAAGTAAGTGCGGATGACAAGATGATAC
CCACGCCAAAAAAGATTACGGAGGAGCGAGAAAATCTAACGAAGAAGACG
GACCAGGGGGCGTTAGGGTCTGTGGGGGACTTTCTGTGGGGCAGTGGGGG
AGGCAAGACGCAGGGAATTAACGGAAACGAGGTGAGGGAGAGGGAAGAGG
AAGGGATTGAGAAGAAGCAGAGGGTGTGGGGCAGTCGAAGCAAAAATCAC
GATGTTGTGAATATGGAAGAGATGGAAGAAGAAAGAGCGGCAGGGACGGT
TGCGGCGAAGGAAGATGCGGGAGCGTCGGCGGTCGAAAGGGAGGGTACGG
AGGCACAAGAGAGGGAGGTAAGTGGGCTCGAGGATAATATTTCCATAGGC
TCCAAAAGGATGAAAATAGGACATCCTGCCATACGTGTGGAGGAAAGGGG
GCAGAAGGGGGAGGAAGAGACGCACGAGTCTATCGACAAGAAATTGCGGC
AGCAGCAGGGCAAAGGCGTTGAGGCGGAAGGCCAGGTACCGCCGTCCAAG
AAGTTGTTCTCGTAATTGTTGATTTTATGGTGGTGTGATGCGATAGGAAG
TTTGGGAGCTGAAAGGATAGGATTGATTAATGCGACAAGAAGTAAATTAA
CTTGATTGTATAG
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protein sequence of NO02G00300.1

>NO02G00300.1-protein ID=NO02G00300.1-protein|Name=NO02G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MLLQTRGHSLLLVVLTTIVLFLTPVASQALIGADHRGLDAGRVFRPLQAA
GVTGGEAALKKKQQQQQQQQQSSILSADFDEKSTTTERDTAVAAAGAAKS
AGSRAAAAAAAGLPVNVQQQEQLQPPSPRFLAVKKKEQTLPSSTSTSAEA
KEAITGSSPSSLLSPSSSSSTVPSRKLQQTIEHLARRSPAPLEPKDIRPV
SKKEGSAWAEKTTKKEGRAFFNKFDGEAKSATEDQDEKKKRWKVEVEVSA
DDKMIPTPKKITEERENLTKKTDQGALGSVGDFLWGSGGGKTQGINGNEV
REREEEGIEKKQRVWGSRSKNHDVVNMEEMEEERAAGTVAAKEDAGASAV
EREGTEAQEREVSGLEDNISIGSKRMKIGHPAIRVEERGQKGEEETHESI
DKKLRQQQGKGVEAEGQVPPSKKLFS*
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Synonyms
Publications