NO02G00200, NO02G00200 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00200 vs. NCBI_GenBank
Match: EWM30647.1 (der1-like domain member 2 [Nannochloropsis gaditana]) HSP 1 Score: 416.8 bits (1070), Expect = 7.100e-113 Identity = 192/224 (85.71%), Postives = 209/224 (93.30%), Query Frame = 0 Query: 141 DGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFLRDIFAQEKLRKLYRKFEDDLH 365 DGS+ SKLKKEYRRTPP+TKAYL+ SL +T AAMLFNKNQWPEWLLLDW+KV RLQ+WRP TSFLYFG+FGFNYLLSAHFMWTYM+HLEKLKCKNPA+FVTMV FGV+FLL GS +MGFQPH+LGHNLSCYLVY+WSRMFEGQDVDVMGLFHLPAH+LPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLV+PP+FLR FAQ+ RKLYR FEDDLH Sbjct: 202 DGSFASKLKKEYRRTPPVTKAYLMASLSVTTAAMLFNKNQWPEWLLLDWAKVVGRLQIWRPFTSFLYFGSFGFNYLLSAHFMWTYMAHLEKLKCKNPADFVTMVLFGVSFLLVGSPLMGFQPHFLGHNLSCYLVYVWSRMFEGQDVDVMGLFHLPAHVLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVKPPAFLRVFFAQKHFRKLYRSFEDDLH 425
BLAST of NO02G00200 vs. NCBI_GenBank
Match: XP_009037604.1 (hypothetical protein AURANDRAFT_71775 [Aureococcus anophagefferens] >EGB07606.1 hypothetical protein AURANDRAFT_71775 [Aureococcus anophagefferens]) HSP 1 Score: 243.0 bits (619), Expect = 1.400e-60 Identity = 112/198 (56.57%), Postives = 143/198 (72.22%), Query Frame = 0 Query: 150 KEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFLRDIF 348 K + TPP+T+AY+ SL LT + L NQWPEWL L+W VF R Q+WRPLT+FL++G FG +YLL+ HF+WTYM LEKL P EF+ M+AFG LL G + G + H+LGHNLSC+LVYIW+R +EGQ+V VM F++ A LLPWFF AQT +LE ELP+ DLLGIA+GHLY A RK++ P L+D+F Sbjct: 104 KSWAETPPMTQAYVGASLALTCGSFLAFNNQWPEWLHLNWGAVFKRAQVWRPLTAFLFYGPFGLSYLLTIHFVWTYMGTLEKLSHTEPWEFLVMMAFGAGSLLLGVGLGGMKTHFLGHNLSCFLVYIWARTYEGQEVSVMEFFNIKAELLPWFFAAQTYLLEHELPIHDLLGIAIGHLYTVARQRKILGAPKPLQDLF 301
BLAST of NO02G00200 vs. NCBI_GenBank
Match: EJK69265.1 (hypothetical protein THAOC_09486 [Thalassiosira oceanica]) HSP 1 Score: 219.5 bits (558), Expect = 1.700e-53 Identity = 107/229 (46.72%), Postives = 143/229 (62.45%), Query Frame = 0 Query: 139 FNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFL-----RDIFAQEKLRKLYRKFEDD 363 F D + +++LK+ Y +TPPLTKAYL S G L NKN++ L L W TRLQLWRPLT+FL FG+ G YLL+ F+WTY S LE+L P +F M+ FG A ++ G +MG PH LGHNLS YLVYIWSR EG +V++ LF+ A +LPWFF+AQT +LE + P+ D LGI GH+YH+ + ++R P F+ D E +R+ Y+ D Sbjct: 100 FGDENTLTQLKEAYAKTPPLTKAYLTASFGAAALGYLTNKNEFLPILQLSWKPTLTRLQLWRPLTAFLNFGSLGLGYLLTIQFVWTYASTLERLNHNTPYDFWLMMFFGAAMMVTGYSIMGLNPHVLGHNLSTYLVYIWSRYHEGLEVNMFELFNTRAEMLPWFFLAQTFLLEGQAPVLDFLGIVFGHIYHHYKSTDVLRTPKFVISWYNSDNKYAEMIREKYKTISSD 328
BLAST of NO02G00200 vs. NCBI_GenBank
Match: GAX16801.1 (hypothetical protein FisN_5Hh173 [Fistulifera solaris]) HSP 1 Score: 216.9 bits (551), Expect = 1.100e-52 Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 138 DFNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFL 344 DF + + + ++ + ++RTPPLTKAYL S G T LFNKN++P L L+W V RLQ+WRP TSFL FG FG Y+L+A F+WTYM+ LE+L P +F M+ FG ++ G ++ P +LGHNLS YLVYIWSR EG +V++ +F+ A LLPWFF+AQT +LE E P+ D LGI GH+YH+ T ++R P L Sbjct: 99 DFAEANTIDRVLEAWKRTPPLTKAYLTASFGATMYGYLFNKNEFPRILTLEWKPVLQRLQIWRPFTSFLNFGPFGLGYILTAQFVWTYMATLERLNHNRPFDFWIMMLFGQLSMVIGYPLLKLSPRFLGHNLSTYLVYIWSRYHEGVEVNMFEMFNTKAELLPWFFLAQTFLLEGEPPVLDFLGIVFGHIYHHCKTVGILRAPDAL 304
BLAST of NO02G00200 vs. NCBI_GenBank
Match: GAX13924.1 (hypothetical protein FisN_5Lh173 [Fistulifera solaris]) HSP 1 Score: 214.9 bits (546), Expect = 4.100e-52 Identity = 100/206 (48.54%), Postives = 137/206 (66.50%), Query Frame = 0 Query: 138 DFNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFL 344 DF + + + ++ + ++RTPPLTKAYL S G T LFNKN++P L L+W V RLQ+WRP TSFL FG FG Y+L+A F+WTYM+ LE+L P +F ++ FG ++ G ++ P +LGHNLS YLVYIWSR EG +V++ +F+ A LLPWFF+AQT +LE E P+ D LGI GH+YH+ T ++R P L Sbjct: 101 DFAEANTLDRVLEAWKRTPPLTKAYLTASFGATMYGYLFNKNEFPRILTLEWKPVLQRLQIWRPFTSFLNFGPFGLGYILTAQFVWTYMATLERLNHNRPFDFWILMLFGQLSMVIGYPLLKLSPRFLGHNLSTYLVYIWSRYHEGVEVNMFEMFNTKAELLPWFFLAQTFLLEGEPPVLDFLGIVFGHIYHHCKTVGILRAPDAL 306
BLAST of NO02G00200 vs. NCBI_GenBank
Match: XP_002180594.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48002.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 211.1 bits (536), Expect = 5.900e-51 Identity = 102/230 (44.35%), Postives = 142/230 (61.74%), Query Frame = 0 Query: 138 DFNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPS-----FLRDIFAQEKLRKLYRKFEDD 363 +F + + V ++ +R+TPPLTK YL S T LFN+N++P LLLDW V +LQ+WR LTSFL FG G YL++AHF+WTYM+ LE+L P +F M+ FG ++ G + P +LGHNLS +LVYIWSR EG +V++ LF+ A +LPWFF+AQT +LE ELP+ D LGI GH+YH+ T ++R P + D ++R Y+ D Sbjct: 107 EFAEDNTVDRMIDAWRKTPPLTKGYLSASFAATLYGYLFNRNEFPTVLLLDWKPVLQKLQIWRLLTSFLNFGPLGLGYLMTAHFVWTYMATLERLNHDRPYDFWIMIFFGQLSMVVGYPIFKLSPRFLGHNLSTFLVYIWSRYHEGMEVNMFELFNTRAEMLPWFFLAQTFLLEGELPVLDFLGIVFGHIYHHCKTVGILRAPDVVVEWYNGDSSLARRIRSEYKPISSD 336
BLAST of NO02G00200 vs. NCBI_GenBank
Match: BAT25220.1 (symbiotic PPC-localized Der [Nitzschia sp. IriIs04]) HSP 1 Score: 210.3 bits (534), Expect = 1.000e-50 Identity = 102/228 (44.74%), Postives = 137/228 (60.09%), Query Frame = 0 Query: 139 FNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFLRDIF----AQEKLRKLYRKFEDD 363 F + + + + Y +TPPLTKAY+ S T LFN N +P WLLLDW K+ TR Q WR T+F+ FG FG Y L+ F+WTYMS LE+L P +F M+ FG+ ++ G +G LGHNLS YLVY+WSR EG DVD+ LF A LLPWFFVAQT +LE P+ D+LGI GH+Y + + L+R P L D + + + +R+ Y++ D Sbjct: 120 FREADPMDRFLQAYHKTPPLTKAYITASALATAYGFLFNNNVFPSWLLLDWRKIVTRGQFWRIFTTFVNFGPFGIGYALTCRFIWTYMSTLERLHHHRPYDFWIMIGFGMISMVVGYSFLGLNAQLLGHNLSTYLVYVWSRHHEGMDVDMFELFTARAELLPWFFVAQTYLLEGAPPIMDILGIVFGHVYFHCKSTGLLRAPDALVDWYVTSESAKPIRQQYKQISSD 347
BLAST of NO02G00200 vs. NCBI_GenBank
Match: CEM27117.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 208.4 bits (529), Expect = 3.800e-50 Identity = 111/234 (47.44%), Postives = 147/234 (62.82%), Query Frame = 0 Query: 140 NDGSYVSK---LKKEYRRTPPLTKAYLLTSLGLTGAA-MLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVA-------FLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFLRDIFAQEKLRKLYRKFEDD 363 +D S SK L K + RTPP+TK YLLTS LTG A L K +P L+ DW KV + Q+WR +T F Y G FG +YL++A F+WTYM++LEKL K+P +F ++ FG+A L A P LGHNLS ++VY+WSR EGQDV++M LF L A LPWFFV QT +LE + P DLLGIA G LYH+ +R ++ P L+D+F Q L++ Y K+E + Sbjct: 108 SDNSVQSKLLDLLKAFDRTPPITKGYLLTSAFLTGGAYFLTAKKVFPRELMYDWKKVL-QGQIWRLMTGFFYIGDFGLSYLMTAQFIWTYMANLEKLNYKHPEQFAILLLFGMACLTLAYPLLNAMDPTWALVPEMLGHNLSSFIVYVWSRTHEGQDVNIMDLFQLRAEYLPWFFVMQTWLLEGQAPTFDLLGIAFGWLYHWLKSRHWLKSPPPLKDLFRQPVLKRQYEKYEKE 340
BLAST of NO02G00200 vs. NCBI_GenBank
Match: CBJ26891.1 (Derlin (Degradation in endoplasmic reticulum protein ) (Der1-like protein) [Ectocarpus siliculosus]) HSP 1 Score: 200.7 bits (509), Expect = 8.000e-48 Identity = 100/224 (44.64%), Postives = 145/224 (64.73%), Query Frame = 0 Query: 139 FNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMG---FQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFLRDIFAQEK-LRKLYRK 359 F + S+V +LK+++++TP +T+AY S+ +T AA N+NQWP +LLLDW +LQLWR T FL G G N+ L+AHF WTYMSHLEKL + P FV ++AFG++ LL + V G + LGH+++C+LV IWSR F G V+++ +F LP LLP+FFVAQT+++E +P DL GI +G+ + S + L++ P L ++F LR Y K Sbjct: 115 FGEASFVDRLKQDWKKTPVITRAYFQVSVAITLAAAALNENQWPTFLLLDWRPAIFKLQLWRLFTPFLNLGPLGLNFALTAHFAWTYMSHLEKLHYREPHTFVMLLAFGMSSLLLLTLVTGGDVNSSYTLGHSMNCFLVMIWSRKFAGTRVNMLDMFELPTELLPYFFVAQTLMMEGVIPWVDLSGILIGYAWQTLSLKGLLKAPKPLVNLFRNNAFLRAEYAK 338
BLAST of NO02G00200 vs. NCBI_GenBank
Match: AHL28474.1 (chloroplast Der1 [Chromera velia]) HSP 1 Score: 192.6 bits (488), Expect = 2.200e-45 Identity = 91/225 (40.44%), Postives = 136/225 (60.44%), Query Frame = 0 Query: 138 DFNDGSYVSKLKKEYRRTPPLTKAYLLTSLGLTGAAMLFNKNQWPEWLLLDWSKVFTRLQLWRPLTSFLYFGTFGFNYLLSAHFMWTYMSHLEKLKCKNPAEFVTMVAFGVAFLLAGSQVMGFQPHYLGHNLSCYLVYIWSRMFEGQDVDVMGLFHLPAHLLPWFFVAQTVVLEQELPLSDLLGIAVGHLYHYASTRKLVRPPSFLRDIFAQEKLRKLYRKFEDD 363 D+ S K ++ PP+TK YLL S L A N N WP+ L L+W +VF +LWR +T F Y G+ GF+Y L+ F+ YM LEK++ K+P EF MV F FLL S MG LGHNL+ +++Y+WSR +EG +V++ + A LPW F+AQ+ +LE + P +L+GIA G +YH+ R+++R P FLR +F +E +++ Y +F ++ Sbjct: 106 DYGGQSPAEKALDALKKMPPITKGYLLLSTALCLAVYSMNDNVWPQSLKLNWQRVFRWGELWRVVTPFFYLGSMGFSYYLNVAFVNQYMGSLEKIQYKSPEEFAVMVLFAAVFLLGASPAMGVPNEMLGHNLATFMLYVWSRTYEGLEVNLFNYMSVRAEYLPWLFLAQSWLLEGQNPAFELMGIAAGWVYHWLKGRRILRAPRFLRRLFEKEAVQREYARFAEE 330 The following BLAST results are available for this feature:
BLAST of NO02G00200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00200 ID=NO02G00200|Name=NO02G00200|organism=Nannochloropsis oceanica|type=gene|length=2259bpback to top protein sequence of NO02G00200.1 >NO02G00200.1-protein ID=NO02G00200.1-protein|Name=NO02G00200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bpback to top Synonyms
Publications
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