NO02G00160, NO02G00160 (gene) Nannochloropsis oceanica

Overview
NameNO02G00160
Unique NameNO02G00160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3834
Alignment locationchr2:61648..65481 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:61648..65481 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00160.1NO02G00160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00160.1NO02G00160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00160 ID=NO02G00160|Name=NO02G00160|organism=Nannochloropsis oceanica|type=gene|length=3834bp
GGGGGTAGACTGCCTCGCCCGTTTATTGCGTTCCACGCCTCTTCCAAAGT
GAATGCATATATAAACATGTAACTACCCTATACCGGCATATTCCTTAAGT
CTGCCCTTCAAATCCTCGTTATCTAATTACACTCTTCACTGTATGTGCTG
CGCGGCCACCCCCCTCGCCCATTAACCTCCTCCCTTTCCCTCACTCCGGC
CTCATCACTTACTCTCCCTCCTCCCTTCCAGCTCGCTACATGCACGCACA
AACAGTCATGGAAACGACCGCCACAACTGCTCTTACTATGGCCACCAATT
TGCTTGACTCGTTCAATAGCGCACCCAGCCTCTCTCCCGAGGTGGTGGCT
CGCATGGAAACCCGGGAGAAGGAAGATGCCTTGGCCGCACGCATCGCCCA
TGACCGCCGCTTATTTGGCATTTGTATTACTCACGCGGCTCTGGATGGTG
GTGGCCTTTTGGGTCATCCGCAATCTTCTTCCACCTCTAACGTCAAGCCT
CTCATCTTTCCAACTCCTGTTACATTCCCTCAATTCTGTCGATCGCGCTT
AGGCAACGGTGCACTGCATGTGAATCGCATAGTGGGCAAAAAATACCCAG
CGCTCGCACGTCGTGTGACCATACGACCTCATCCTTCCACTTCTCCCCCT
CTTCCTTTTCTGCCTTTCATGACAAGTGTCCCTTCGTCCTTTCCTCCCTT
TCCTTCCCCCTCCACTCTCCTCACTAATCTTTCTCCTCCTCCTGATACGT
CTGCCGAAGCTCCAGCTTCCAAGGCTGACACAAGTTTTGAATTATTATTG
ACTCAGTCAATGGTGTCTATGGAAAGAAAGCCAGGGAGTAATGAGACGAA
GGAAGGTCAAGAGAAGGGAGAGGGGAAAGGAGAATTGAAAGGAATGACGA
TGAGGATGGTGGTGACGACATCGAGTGGTGAGAAGAAGAAAAGGAAAGAA
GGGGGGACAAAGATCCGGGACAAGGAATCGGTGACTTTGAGTATGGGAAA
AGAGGAAGGGTGTGAGGCAACGAAGAGCGAGGAGGAGGACGACGAGGAGG
AGGGGAAGGAGGAGGAGGAAAATGATGTTGAAGGAAAGGAGGATAATGAG
GAGGAGGACGAGGAGGAGCAGCAGAAAGAGGGAAATAAGGAGAAAGTCGA
AGTGCGGCTGAATGTGGCTGAAAGGGCAAATCACGGAAGGATGGGAGAGA
TAAAGGGGCAAATCAAGGAGGCGGCAACGATAGTGGGGGAAGTGGAGGGC
GGGAGGGAGGAGAAAGAGGAAGAAGAGAGGGTAGGGGAGGAAACGGCAGT
AATGGGAGAAGAAGGTAAGAAGGATAAGGTGCAAGAAGGGGAGGAGGAGG
AGGAGGGGACGGAGGATGCAATGGAACAGCTGTTAGTAGAGGCCAAAGGT
AAGATAGAGGGTGAGAAGAAGGAGGAGGAGGGAGCAGAGAGTAAGGAGGA
GGAAGCAGGAAGAAAGGACAAAGGGGAGAAGGAGGAGGAGGAAATAGAGA
AGAAGGAGGAGGATGCAGAGAAAGATGAAGCCGAGATGAAAGACAAAGGA
GAGAAGAAGGAGGGGAAAGCAATTAATGAGGAGGAAGCAGAGAAGAAGGA
GGAAGAGGGGGAAATCTGTGATATCTCTGCCCCTGCTTCAGCTGCTCCCC
CGATCCCCATCACCTCCTCTTCTCCTTGTCATCCCGCTCCTTCTCCCTTT
CCTCCTGCTCCGCCTTTTGTGGTCGATCTGACTCACCCTGTGGCCTGCGC
CTATGCCCTCAATGAGGTCGCCGCCTCCTGCCTCCCCGCCTCCCTCCGTC
GGTCCCTCCGGAGAGCCCTCTCTTTCCGGCGTCGGCATTTCCTCCCTTTG
CGCGCTTGCTTGTTCCGGATAGAGAAGAGGGAGGGCGGGAAAGAGGGAGG
GTGCAGCAGCAGTAGTAACAGCAGCAGCAGCGGCAGCAGCGGCAGCGGCA
GTGATAGCGTAGTGTTTCAATGTCAGGGCCAGCAGCAGCAGAATCAGCAG
CAAACACAGAGAGAAGACGGAATGGACAGAATAAAAGAGAAACAGCAGCA
GCCGCCGCCTCCCCCACCTCATCCTTCCCGTCGTCTCAACGCCCTTGCCC
CTCTCCAGAAAGCCCTCCGTCGTCCCCCCCTCCTTCTTGGCCTGAACCTC
CGACAGCTCATGCTCCTATACCCCCCGCCGgtgagcagacagacagggag
ggagggaaggagggagggaggcagggagggagagtggatgaggtatgagc
gaggacgaaaaggaaatgtaatagacaatgacctcctcctctctctccgt
tcatccctcagGAGAGCAGCCGCGAGCAAGAGGAGTGGGAGCTGAGGGTG
GCCATCCAACAGATACGGGAGGAGGAGGAGGAGAGGGCAGGGAGGGAGGG
AGGGAGGGTTGGCAAGCGGCGCAGACTACCGAGTCGCAAGTCTCGTCCGC
CTCCGGgtacggtgattccctccttctctccctccctccctccctccctc
cctccctctcgtccgttcacctccgctttctctccatccacacactcacc
gtcccccctccccctccctgaacccctccctcagGTTCTCTGAGCAACGA
CACAGAGATCATCCTGGGGCTGGCTGCGGGCGACGAGGACTTGATTGACT
TCGATGGAGAGGAGAGGGAGGAGGAGGAGGAGCGCGGAAAGGAGGGAGGT
TGGGAGGGGAAAGCTGCGGAGATCAAGAAGTCGAAGAGGGACGAGGTCCT
GGCGTCTCTGACGCTCACGGGGGGGGGGAAGGAGGGGCGGAGGAAGGGGG
GGAAGAATGGGAGGAGGAAGACGAGGGAGGAGGAGGAGGAAGATGAGGAG
TACACTTTGGTCGAGAGCGATGCCACAGAGGAGGACGGAGATGAGGACGA
CGACGAAATCGAGGAGAAGAAGAAGCAGCAGAGAAAGAAGAGGAAGAGAA
AACAGGGAGCACAGGCGCCTGTACAAATTCCGCTCTCCTCCACCTCTTCC
TCCTCATCCTCCTCCTTCCCCTCCTCCCTCTTCACCACCCCCCTCGTGCC
CACACCGAAGCGAGAAAAAAAATCCAGCATCCCCCCATCCTCCCTCCGTC
CCTCCTCCCCCTCCTTCTCCCTCACCACTGACGGCAAGAAGAAGAAGAAG
AAGAAGTGGAAGCTTTTGTCCTCTTCCTCGACCTCTCTACAAAACACACC
CCGCCCTCTTTCCCTCCCTCCCTCCTCCTCCCCTGCCCCGCTCCCCGTGA
AGAAAAAAAGGAAAATGCAACAGCAACAGCGACAGCAGAACCTCCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGGAGGCGGTGAACAA
AAGGATGACGAAAAGGATGAAGAAGAAGGAGAAGAAGGAGAAGAAGGAGG
GGGAGGGGAAGGGGTGGGAAACCAAGGCAGACATGCCTGCTAGGCCGGCA
GGGGGAGTGAAGGAGGGCGGGAAGGAGGGAGGAGTGACGATGTCGAGGAA
GAAGGGAAGACAACCGATGGTGGGCCTCGAGGACCTGCTGGTCGTGGCTC
AGAGAGGGGGTGGCATGTTGGACCTGGCGTTTTTACAGCAGCTGATTCGG
GGAGGGGGAGGGAGAGAGGGAGGGACGGAGGGTGGGAGGGTGAGTGGGAA
AGAGGAGGGAAGGAAGGGGAGAGAGACTGAGGTGGAAGGGGGGGAGGGGG
GGAGCACGGAGGGAAGGAGGCTGAGGCGGAGGGGGAAAAGGAGGAAATTG
CTTGGGTTGAAAAGACGGAGGGGGTGGGGGATGGAGGGAGGAGGGAGGAG
GGAGGGAGGAGGGAGGAGGAAGGAGAGGGTGTAA
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protein sequence of NO02G00160.1

>NO02G00160.1-protein ID=NO02G00160.1-protein|Name=NO02G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1112bp
MHAQTVMETTATTALTMATNLLDSFNSAPSLSPEVVARMETREKEDALAA
RIAHDRRLFGICITHAALDGGGLLGHPQSSSTSNVKPLIFPTPVTFPQFC
RSRLGNGALHVNRIVGKKYPALARRVTIRPHPSTSPPLPFLPFMTSVPSS
FPPFPSPSTLLTNLSPPPDTSAEAPASKADTSFELLLTQSMVSMERKPGS
NETKEGQEKGEGKGELKGMTMRMVVTTSSGEKKKRKEGGTKIRDKESVTL
SMGKEEGCEATKSEEEDDEEEGKEEEENDVEGKEDNEEEDEEEQQKEGNK
EKVEVRLNVAERANHGRMGEIKGQIKEAATIVGEVEGGREEKEEEERVGE
ETAVMGEEGKKDKVQEGEEEEEGTEDAMEQLLVEAKGKIEGEKKEEEGAE
SKEEEAGRKDKGEKEEEEIEKKEEDAEKDEAEMKDKGEKKEGKAINEEEA
EKKEEEGEICDISAPASAAPPIPITSSSPCHPAPSPFPPAPPFVVDLTHP
VACAYALNEVAASCLPASLRRSLRRALSFRRRHFLPLRACLFRIEKREGG
KEGGCSSSSNSSSSGSSGSGSDSVVFQCQGQQQQNQQQTQREDGMDRIKE
KQQQPPPPPPHPSRRLNALAPLQKALRRPPLLLGLNLRQLMLLYPPPESS
REQEEWELRVAIQQIREEEEERAGREGGRVGKRRRLPSRKSRPPPGSLSN
DTEIILGLAAGDEDLIDFDGEEREEEEERGKEGGWEGKAAEIKKSKRDEV
LASLTLTGGGKEGRRKGGKNGRRKTREEEEEDEEYTLVESDATEEDGDED
DDEIEEKKKQQRKKRKRKQGAQAPVQIPLSSTSSSSSSSFPSSLFTTPLV
PTPKREKKSSIPPSSLRPSSPSFSLTTDGKKKKKKKWKLLSSSSTSLQNT
PRPLSLPPSSSPAPLPVKKKRKMQQQQRQQNLQQQQQQQQQQQQEEEAVN
KRMTKRMKKKEKKEKKEGEGKGWETKADMPARPAGGVKEGGKEGGVTMSR
KKGRQPMVGLEDLLVVAQRGGGMLDLAFLQQLIRGGGGREGGTEGGRVSG
KEEGRKGRETEVEGGEGGSTEGRRLRRRGKRRKLLGLKRRRGWGMEGGGR
REGGGRRKERV*
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Synonyms
Publications