NO02G00150, NO02G00150 (gene) Nannochloropsis oceanica

Overview
NameNO02G00150
Unique NameNO02G00150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3625
Alignment locationchr2:57701..61325 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:57701..61325 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO02G00150 vs. NCBI_GenBank
Match: EWM30651.1 (hypothetical protein Naga_100242g3 [Nannochloropsis gaditana])

HSP 1 Score: 86.3 bits (212), Expect = 2.600e-13
Identity = 62/143 (43.36%), Postives = 76/143 (53.15%), Query Frame = 0 
Query:  147 QPTEQDLPQRRAHKRSSRSLLSTPNQHLHTAVTPAVHPETSGARRAFMLP-----LPGLGRSNSTNSVLSAHRGR-------HNNGSSYVFPPSLPPSLPKPTAGGTDEWRRSLTIEERMEVRKRLRAAYLSQTKEGDLEGLL 278
            +P+ +      A K    +  STP   L T+  P   P      +A  LP     LP L R  S++SV S    R        N+ S+Y FPPSL PSL K  +G  DEWRR LTIEERMEVR RL+ AYL   +EGD+EGLL
Sbjct:   66 RPSPRQQEGGHAKKEGRFTSGSTPGTILPTSQPPPPSPTHPSDNQASSLPTRLPLLPALTREGSSDSVRSDSGPRLPPTLALQNSSSAYPFPPSLLPSLSK-ASGAADEWRRRLTIEERMEVRGRLKTAYLHHVQEGDVEGLL 207
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BLAST of NO02G00150 vs. NCBI_GenBank
Match: OQS07396.1 (hypothetical protein THRCLA_00595 [Thraustotheca clavata])

HSP 1 Score: 66.6 bits (161), Expect = 2.100e-7
Identity = 36/96 (37.50%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:  232 SLPKPTAGGTDEWRRSLTIEERMEVRKRLRAAYLSQTKE-GDLEGLLAAMEEDFLRLNAPSRLDYIKVSLQYDKKLSEKQRQLRGEMDRIFLPSFS 327
            S+P  +     +WR  LTIEER  VR ++R AY S  K   +L    +A+EE+ L + APSRLDY K   +++ ++  K+ QL+G++  +   SF+
Sbjct:  186 SIPTSSGPPPQDWRMYLTIEERQAVRSKIRDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQLQGQLATLEKKSFT 281
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BLAST of NO02G00150 vs. NCBI_GenBank
Match: OQR98470.1 (hypothetical protein ACHHYP_08596 [Achlya hypogyna])

HSP 1 Score: 66.2 bits (160), Expect = 2.800e-7
Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 0 
Query:  233 LPKPTAGGTDEWRRSLTIEERMEVRKRLRAAYLSQTKE-GDLEGLLAAMEEDFLRLNAPSRLDYIKVSLQYDKKLSEKQRQLRGEMDRIFLPSFS 327
            LP  TA    +WR  LTIEER  VR +++ AY S  K   +L    +A+EE+ L + APSRLDY K   +++ ++  K+ QL+G++  +   S++
Sbjct:  122 LPASTATPPQDWRMYLTIEERQAVRSKIQDAYTSTCKTYEELLQAASAIEEELLHIAAPSRLDYFKSGFEFENRVKLKREQLQGQLAALEKKSYA 216
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BLAST of NO02G00150 vs. NCBI_GenBank
Match: GAX94258.1 (Hypothetical protein PINS_002128 [Pythium insidiosum])

HSP 1 Score: 65.5 bits (158), Expect = 4.700e-7
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 0 
Query:  237 TAGGTDEWRRSLTIEERMEVRKRLRAAYLSQ-TKEGDLEGLLAAMEEDFLRLNAPSRLDYIKVSLQYDKKLSEKQRQLRGEM 318
            T     +WR  LTIEER  VR ++R AY S+ T   DL  +  A+EE+ L ++APSRLDY K   +++ ++  K+ QL+G++
Sbjct:  145 TQTSMQDWRMYLTIEERQAVRSKIRDAYSSRCTSYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQLQGQL 226
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BLAST of NO02G00150 vs. NCBI_GenBank
Match: XP_009524419.1 (hypothetical protein PHYSODRAFT_350785 [Phytophthora sojae] >EGZ21702.1 hypothetical protein PHYSODRAFT_350785 [Phytophthora sojae])

HSP 1 Score: 64.7 bits (156), Expect = 8.000e-7
Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 0 
Query:  243 EWRRSLTIEERMEVRKRLRAAYLSQ-TKEGDLEGLLAAMEEDFLRLNAPSRLDYIKVSLQYDKKLSEKQRQLRGEM 318
            +WR  LTIEER  VR ++R AY S+ T   DL  +  A+EE+ L ++APSRLDY K   +++ ++  K+ QL+G++
Sbjct:  230 DWRMYLTIEERQAVRSKIRDAYTSRCTTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQLQGQL 305
[Close]
BLAST of NO02G00150 vs. NCBI_GenBank
Match: POM73857.1 (hypothetical protein PHPALM_9259 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 64.7 bits (156), Expect = 8.000e-7
Identity = 33/76 (43.42%), Postives = 51/76 (67.11%), Query Frame = 0 
Query:  243 EWRRSLTIEERMEVRKRLRAAYLSQ-TKEGDLEGLLAAMEEDFLRLNAPSRLDYIKVSLQYDKKLSEKQRQLRGEM 318
            +WR  LTIEER  VR ++R AY S+ T   DL  +  A+EE+ L ++APSRLDY K   +++ ++  K+ QL+G++
Sbjct:  272 DWRMYLTIEERQAVRSKIRDAYTSRCTTYEDLLQVACAIEEELLHISAPSRLDYFKSGFEFENRVKLKKDQLQGQL 347
The following BLAST results are available for this feature:
BLAST of NO02G00150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 6
Match NameE-valueIdentityDescription
EWM30651.12.600e-1343.36hypothetical protein Naga_100242g3 [Nannochloropsi... [more]
OQS07396.12.100e-737.50hypothetical protein THRCLA_00595 [Thraustotheca c... [more]
OQR98470.12.800e-737.89hypothetical protein ACHHYP_08596 [Achlya hypogyna... [more]
GAX94258.14.700e-741.46Hypothetical protein PINS_002128 [Pythium insidios... [more]
XP_009524419.18.000e-743.42hypothetical protein PHYSODRAFT_350785 [Phytophtho... [more]
POM73857.18.000e-743.42hypothetical protein PHPALM_9259 [Phytophthora pal... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006587NSK006587Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00150.1NO02G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|321565gene_10176Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100242g3gene19Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00150.1NO02G00150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00150 ID=NO02G00150|Name=NO02G00150|organism=Nannochloropsis oceanica|type=gene|length=3625bp
CTCCTCTCTGCTGAGGAAAATTCTGTTCGGAAATCGACACGGCTTCTACA
CACATTTGTTTCGTCTGACATCCACCCACATGATACACCGGCAGTCGTAC
CTTTCTTGTCTCCTAGAAACAGTCGGTCTTTGGTGCTGGCAGTGGGGGCT
TATGGTTTCTTCTTCAGGTGCACACTACTCAACCCCACTTCTTGTACCAC
AACCCAACGAGATGTTTTATCATTCTCTCCCACCAGAAGAACTGGCGCAA
GTCATGCAACTCAGCAGCAAGAAAGCAGTGCCAAAACACTGGGAACCAGG
GCGCCGGGGCGGAGGAAAGGAGGGACGTGCGCTTCATATTCCGCTACTGC
TTGCTTGCCTTTATACAGAGACCACGGACATTTGTCCCAAACGATCCCTC
TACATCCCTATTCATCTCAGCATATGCCTCACTCCCTCCCTCTGAAGACA
GGTCTTACGCAGTCTATCAAGGCAGTGAAAGGAAGGAACAAGAGGCGACT
CACGAGTCAAGCAACTTCTTGGGCGGCCATTGTTGGGGCGAGAGGATTCA
GAATACAGCAAGCCAACGCCATCATGCCCACAGCCGTCTCTACACGCGGA
GTGCACgtacgttaggagaaggggagaatgaataagggagggatgggggg
aagggaggtcgagcgggacatggccaaggtgttggattcttctgtctttg
ggggacactaaagtcaggcacatacctgagtgagaaagaagaggatgaga
caggtcaccctcattcacattttgaccccatgacgacaaatagCAGGACA
CCTCCTCGGCCCTTGCTGCCTTGTCCAGCGCTGCCGCCATTCACAAGAAT
CATCTCAGCAAGgttgggagggagggagcgatggagggagggagaaaggc
gatggggatggagagggagagctcttcatcgaatgagataggcgtatatt
gaccgtctatgatcgtcgaggccgacgcttcctcatgtaaatatctcatt
ctccactctcttttctcttcattatcctcttccttattgatttacagCAT
TCCTCCGCTTCCAACGACCATGACGCCCTCTCCTCCTCCTCGTCGTCGTC
GTCGTCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCATCTT
CTCCGATCTTGAGCAAAGAAAATAATCCCCTTGAATTCCCTTCATCGTCC
GTATCGCATAAGGCCTCACTGGAGTCGCTTCTGCAGCCGACGGAGCAAGA
CCTGCCACAGCGGAGGGCGCACAAGCGgtagggagggagggagggaggga
aggagggaaggaaggaggaagggaaggaggaaagggaggaaggagttgct
tgagaatgtaaggaattttggaaaactaatctcgagactgtgatgaaggg
atctatcagaacaagaaagattcaccccttcttccctctctcccccccat
ggcatccaacccagGTCATCGAGGTCCCTCCTCTCCACGCCCAATCAGCA
CCTCCACACCGCCGTAACACCTGCCGTGCATCCCGAGAgtacgtacatct
gctagaagcccgcccgccctccctccctccctggagattattctcgaccc
taccatactccctcccacggccccctcctccctcccttcctccttcccct
cttgccttgtccctccttccgtcccccccttgcccgaaacgactcctcgt
atcttaccttccctccctccccccctccctccctttctccctccctttct
ccctccagCGTCCGGCGCTCGGAGGGCCTTCATGCTGCCCCTCCCGGGCT
TGGGCCGATCCAACTCCACCAATAGTGTGCTTAGTGCACATAGAGGACGg
tagggaggatgggagggagggagggagggagggagggagggaggaagcga
gggtctggcgggagaagattgtaaaagcaacgcctcgatgggagcgagag
gaccaaagtcatgtttgccctccctccctccctccctccctccctccctc
cctccctccctccctccgtttccttctgctctccatccctctcttcttcc
cttccattcacatcctccccccctacctctccagGCACAACAACGGCAGC
TCCTACGTCTTCCCTCCCTCCCTTCCTCCCTCCCTTCCTAAGCCCACCGC
GGGTGGCACCGATGAGTGGCGTCGGTCCCTGACCATCGAAGAAAGGATGG
AGGTGAGGAAGCGACTGAGGGCGGCTTATCTCAGCCAGACCAAGGAAGGG
GACCTGGAGGGCTTGCTCGCGgtagggagggagggagggagggagggaaa
ggggatggaaaatagaagatctctcaaaagagttaaagagctgtagcatt
cgttcgctccttgtcacgttcattcgcagattttcatcaaagacccttca
caaccctcccctcctccctccctccctccctcacttcctcgctctctccc
cctgtagctggtgtagGCGATGGAAGAGGATTTTCTGCGCCTGAATGCCC
CCTCTCGACTCGATTACATCAAGGTCTCGCTGCAGgtaggtaggtaggga
gggaggtagggagggaggagtgaggagggaggagtgaggagtgaggaaaa
aggaacggcagctacccatactgttacttatgccattcctttccccctcc
ccccctccctccctccctccctcgctactccagTACGACAAGAAGCTGAG
TGAGAAGCAAAGGCAGCTCCGAGGAGAGATGGACAGAATCTTTCTCCCCT
CGTTCTCCTCCTCCTCATCCTCCTCCTCCTCCACTTCCTCCTCCTCCGCC
TCCTCTTCTTCCCCCACTGCTTGCTTGTCCTCCACCACGAAAGAGAAGGA
AGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGGGATGATAGCACGAGGAG
AGGGAGGAGGAGGAGGAGGTGAAGAAAGAGGGGGAAGAGAACCCGCTGCG
ACGTCGGCGCAGCCAACGGAAGCAGAGGCTGAAGTGAGAAGAAGAAGAAG
AAGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAAAAGGAACGAGTCGTA
AAAGAGTGAAGAATTAACGCAGGCAGGGAGGGAGAGAGGGAGAGAAGGCA
TGTACATATACATGTATATGGAGGGTGGGAGGGGGAAGAGAGTCACGAAA
CAGTAAATAAAAGGAAATCGGAGGGTCGAGAGGGGCAGACATTCGTTTAC
CAGGACGGAGAGAGGGAGGAAGAGAGAAAGAGGGAGAGAGAACGAGGGAG
GGAGGGAGGGAAGAAGAGAAGGATGCTATCAGGGAGATGAGGAGAAAGGC
GGCACCGGAGAGAGGGAGAAGGCGAATGTGAAGGAGGGGTGGAGGAAGAG
GAGAGGGAGGAGGAAGTTGATATACGAGAATCAAGCCCTCTCTTGAGCAA
GCAAACCGACGATGAGGTCGTGGGGAGCCATGTGAAGGAGTAGAAGCAGC
AGCAGCAGTCGCAGCAGCAACAAGGGCAATATCTCATTATCCAGCGATGG
TGGAGTAAAAAATAAAAAAGGAAGAAGTACAAAAGGAGAAAAAACAAGGT
GGGAAGGAGGGGGGGAAATGAGGCGCGAAAGCTTTCTTTCTGTTCCAGCC
AGGAAAGTGACGAAGCCATTCCCCT
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protein sequence of NO02G00150.1

>NO02G00150.1-protein ID=NO02G00150.1-protein|Name=NO02G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=429bp
MPHSLPLKTGLTQSIKAVKGRNKRRLTSQATSWAAIVGARGFRIQQANAI
MPTAVSTRGVHQDTSSALAALSSAAAIHKNHLSKHSSASNDHDALSSSSS
SSSSSSSSSSSSSSSSPSSPILSKENNPLEFPSSSVSHKASLESLLQPTE
QDLPQRRAHKRSSRSLLSTPNQHLHTAVTPAVHPETSGARRAFMLPLPGL
GRSNSTNSVLSAHRGRHNNGSSYVFPPSLPPSLPKPTAGGTDEWRRSLTI
EERMEVRKRLRAAYLSQTKEGDLEGLLAAMEEDFLRLNAPSRLDYIKVSL
QYDKKLSEKQRQLRGEMDRIFLPSFSSSSSSSSSTSSSSASSSSPTACLS
STTKEKEEEEEEEEEEGGMIARGEGGGGGGEERGGREPAATSAQPTEAEA
EVRRRRRRGGGGGGGGGGKGTSRKRVKN*
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Synonyms
Publications