NO02G00130, NO02G00130 (gene) Nannochloropsis oceanica

Overview
NameNO02G00130
Unique NameNO02G00130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4989
Alignment locationchr2:48171..53159 -

Link to JBrowse

Properties
Property NameValue
DescriptionSerine-threonine protein kinase-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:48171..53159 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016301kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_domain
IPR000253FHA_dom
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Homology
BLAST of NO02G00130 vs. NCBI_GenBank
Match: EWM30652.1 (serine-threonine protein kinase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 209.5 bits (532), Expect = 3.700e-50
Identity = 115/209 (55.02%), Postives = 140/209 (66.99%), Query Frame = 0
Query:    1 MPQTNHDPALITRSENSTPTLPLPYGVLTLEYSGNTVPSELQGVPTKLFLARSSHTVGRIAAPGAAADGVGEGKKGTVPVKVPRHYVINKAYISSMHCRLQVVEEDGKGKGSKDDEENENGISLNHHQCEEADEQPRGLSIRLTDTSTYGTHVNGATVGKEKSVFLQDGDLVTLFRPRDARKPALSYIYRARPEGRTQRGYWARRHDDA 210
            MP TN D  +IT   ++TP LPL YG LTLE +    P+ELQGVP ++ LA S HTVGR+  P +  +GV    KG+ P+K+PRHYV+NKAYISSMHCR +V+E+      ++  EE EN  +       E  E  R LS+RLTDTST GT+VNG  VGK KSV L DGDLVTL+RPRD  KPALSY+YR + EG T   Y ARRHD A
Sbjct:    1 MPPTNPDSLVITSVGDATPPLPLAYGKLTLECTNEAFPAELQGVPKEILLALSKHTVGRV--PISGGEGVEGLWKGSAPIKIPRHYVLNKAYISSMHCRFEVLED------AEGAEEKENSRASGRW---EPGEHARSLSLRLTDTSTNGTYVNGTPVGKGKSVLLMDGDLVTLYRPRDTHKPALSYLYRVKKEGYTDMAYRARRHDVA 198          
The following BLAST results are available for this feature:
BLAST of NO02G00130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30652.13.700e-5055.02serine-threonine protein kinase-like protein [Nann... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006586NSK006586Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00130.2NO02G00130.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO02G00130.1NO02G00130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633926gene_10174Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100242g4gene18Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00130.2NO02G00130.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO02G00130.1NO02G00130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00130 ID=NO02G00130|Name=NO02G00130|organism=Nannochloropsis oceanica|type=gene|length=4989bp
CAGACGTTGGCATTCAGCAGCCCTGAGGACTAAATTACGATCCAAGCCAA
GGCCTCCGACTCCATCGTCAGAGCCATGCCACAGACCAACCACGACCCCG
CTCTCATCACTCGCTCTGAAAACTCCACCCCGACTTTGCCGCTGCCCTAC
GGTGTGCTGACACTTGAGTACAGgtgcgtgcaggagagagaaatgtcagc
ttagtattgtgtcgtcctgaggaggagtgatttttctgcttaatggcact
ttcctccttttgtcctcctcttcgtccctaccccactcctgatacagCGG
CAATACCGTTCCTTCAGAGCTGCAAGGGGTGCCCACGAAGCTCTTCCTCG
CGCGCTCCAGTCATACGGTGGGTCGCATTGCGGCTCCAGGTGCAGCCGCG
GATGGAGTCGGGGAAGGAAAGAAAGGCACAGTGCCTGTCAAGgtgcgtgt
cggcagcgtaggatgggggagacgaagaagactcggagtctatgtgtaat
cttcttctacaagctattttttcgcccgtgctgatcctccttctctccgt
cattccttccctccctctttctcttctcagGTCCCTCGGCATTACGTGAT
CAACAAGGCCTACATCTCATCAATGCACTGCCGCCTCCAAGTCGTCGAGG
AGGACGGGAAGGGGAAAGGGAGTAAGGACGACGAGGAGAACGAGAACGGC
ATTTCCCTCAATCACCATCAGTGTGAGGAGGCAGgtatgatggttcaggc
cctctctcctcgagttgtattcccttgtcccccccctccctcctgcaaaa
ccacgttgcctctttcctacccctccttctcctctctcattcgtcgccat
ccctccatccctccctcctccccccctgctcattcctccagACGAGCAGC
CTCGTGGTCTGTCCATCCGCCTGACCGACACCTCCACGTATGGCACGCAC
GTCAATGGCGCTACGGTCGGCAAGGAGAAGAGCGTCTTCCTTCAGgtgaa
caaggagggagggagggagggatgagggagggaggagggagggagggagg
gagggagggacggcagggaggagttatcttttattttccgtacatcaccc
ctctagcagacccacatgcaccctccctccctccctccctccctccctcc
ctccttccccagGACGGAGACCTGGTCACGCTCTTCCGTCCTCGCGACGC
CCGAAAGCCCGCCCTCTCCTACATCTATCGAGCTCGGCCGGAAGgtagga
aaggagggggggagggaaggagggaaggagggagcaaaggcagaaaggcg
ggctgtcgaagggcgtagaaggaaaagagagggcagggaggggcgagcat
agaggccaagaagatggagggagagggagacccacaactactgatggccg
cagatacgaaattcaacccttcccccccccccctcctcctacctcttctt
ctttttcttctttttcttctgctgttgttcttcttcctgcctccacctca
ccttcctccgctctacagcatcgtcataatcttccctttcatccgccatc
tcttcaaaattaacagGCCGAACGCAACGGGGATACTGGGCTAGGAGGCA
TGATgtgaggagggagggagggagggcgggcgagagggagggagggaggg
agggagggagagcggggaaggtctcctttaagggcctctaatgcaattgt
tttcttccaaatatctgtttaatccctcctttcagGATGCCTTCAATGCT
GCTGCTGCTGCTGCTGCTGCTCCCTCTACCCGTAGACCCTCCGTGAGCCC
TTCACTGGTCCCTGACTCCGCCCCTCCCTCCCTCCCTCCCTCCTCCTCCA
CGGGCACGGGCAGTGTGCTCGAGGAGATGCGTAAGAAGAATGTGGGGCTG
CAGGAGAGGATGGAGGCGCTGGAGGAGGAGGGAAAGGCCGCCAAGACTCG
AGTGCAGgtagggaggaaggagggagggagggagggagggagggaaagag
ggagggaaaggtacacaggcaggtcagttgaacttgctatgcgctgatgt
atcctttcattcctcccttcctccctcccccaccccacatcttcaatccg
tgccctgaaacagGAAGCAGAGTCCGCCATGGGGAAGCAAAAGGAGGCGC
ATGCCACTGCCATTGAGGCGCTTCAGGCCGAGCTCGCTTCTTTTCAAGgt
aaggagggagggagggagggaggaagggaggggcgactgggctggaaaaa
ggatcatctcttcaccttgcctgattcttaccttcccatctctctcctgt
cagCCGCTGCAGCCCAGGCCGAGGCCGGCAAGGAGGGCGGGAAGGAGGAA
GGGGAGGCGGCGGCGCTGCGGGAGGAGCTGGCGGCCCATCAGAGCATTGT
GGAGGGCCTCCGGCTGCGGGTGGGGGAGAAAGAGAGGGCCGTCAGCGAGC
TACAGCAGGACAAGGTGGAGCTGGAGGAGAAGgtatgacagaaaactctc
actgccctccctccttccctccctccttccctccctcctacccacccacc
cacccctctccctctctccccccctccctccctacctcccttcatagGTG
GCGGAGCTCGGGGGGTCTTTGGCCACTGAACGTCGAGAGCGGGATCGCGT
CAACACTGCCCTGGAGAAAGAGACTAGCAAGGCCAAGACCTTGGAAGCCA
AGgtacgacgacgcttttcctttctcttgattagctttctctttctctgg
attattttccccttaactttgattagctttctctttatctggatcggcgc
tttccttcattcgatttgactggggagtctcaagtgttcactcccaccac
acgggctgacggcatttgattcacgtctccctttctctttccagGCAGAA
GAGCTAAAAATAGCGAACATCGCCCTAGAGGAAGATTATAACCGAGTCAG
TTCGGAGCTGCGACGGGAGCGGGAGGAGAAGGAAGACGCCCGCAGGCTGC
TGGAGGAAAACAACAGTGgtgcgtgggtagggacggaggggaggggggag
gtgtgaggacaaattgcgttcaccaaaaaatcttacacaaaccccgccca
ctcacacaccccatcgttgcattcccccctcccctctctctcctccctcc
cccagCCCTGACCGCCCACGAGGGTGTGAAGGGAGAGTTGATGGAGCTCC
GGACCATCGTCGAGAATCAAAAAGAAGAGCTCGAGCGCAAGCGGAAGGAG
GTCGATCGCCTCCGAGGGgtatgtcctctgtgttcttccccccctccttc
ctcctctcccctccgtcttccctctctctccttccttcttttcctctttc
agatgaaggccacacctttatacacactctctgacattgcccatgccctc
cctccctccctccctccctcagCACGTCTCCAAGCACGAAGCAGTCCTGG
AGGAGAAGCTCGCGGCCCAGCAGCAAACCAAGGCGGCAGAAAAGGCTCTG
GAGGCCAAGACCAGgtacggagggagggagggagggagggaggtaggtag
gtaggtaggtagggtaggaggacggaatattggtacaacccaatgacatg
actctaatctcttctctggccactccctccttcccgtccacccgcgccaa
agGGAACTAAACACGCTATCCTCGCGCCTGTCCTCCCTCCAGTCCTTCCA
GGCCGCCACCACCGACGAGGTCGCTTCCCTCCGCACCGCCAAATCGGCCC
TTGAAGCCAGCAGAGACAATCTGGCTTCCGCCGTCACGGACATGGAAGGG
AAGTGGAAGGAGGCGGCGGAGAAGGTCAAGCACCTCCGCGATCGTGTGTC
TCAGTTGGAGgtaggtagggaaggagggaaggagggaaggagggagggag
ggaaagaagaatttttattttataacacggaaaggttacatctcaccctc
cgtcccttccctttctccctccctcctcagACTGGGAAGGAGGCCATGGT
TGAGTCCCACAACCGCTTCCAGACGGCCGTTAGCCTTTTTTCTGCTGACT
TGGTCACATTCCTCCACCCTGCCGCCTCCCCCTCCCTCCCTCCCTCCTCT
TCCTCAATGCCTGCTACTCAGCAGCCGCCGCCGCTGCAGCAGCAGCAACA
GCAGCCGCCATCGCCCACACAGATGTCTACCAGCATATCTCAGACGGAGG
AAAGGGAGGAAGTAGTGAAGGAGGGAGGGGGCAAGAAGAAGCGGGAGAGG
GAGGAGCGAGGGTTGGGTGTGATTGGGGAGGAGGGAGGGGGAGAGGTTGA
GGAGGAGGAAGAGAGTGCTTTGATGATTGAGGGTGGGGAGGAGGGAGGGG
AGGGGGGGAAAGAGGAAGAGGTGGAAGCGGAGGAGGAGCAGGCGAAGCGA
CGGAAGGTGGAGGAGGCCAGGGCGAAAGGAGTCCAGGTGCTGGATTTGTC
GGAGGAGGATGAGGGAGAGGAGCACGATAATGAGACTATGAAGGCAGGGC
ACAGGGAGGACGAGTTGGAGGAAGGGGAGGAGGAGGAGGTGACAATCATG
AGTGGACATACAAAGATGACGAGGTGAGAGGCGTAAAATGATGGATGGGA
AAGCCGAACATGGCCGATTCTCGAAGGCCAGTATGTGTCGGGGGGATGGG
GGAAGAGTAGTGAGGTGGTGAAAAATAGAAAGAAGAGTGAAGAGGAAGAG
GAGGAAGAGGAGGAAAAATGAGAAGGGAGAGAGACGACTGGGGGAGTTTC
TGCTCAGCCCCTCCTCCTTTTTCTACTTCGTCTGTGTGTGTGGTGTAGTG
GTTGTTGGTTAACTAGCTGACAAGGTACTGTACATTGCTGGCCATAAGGA
TGCAGGGAACCGATGAATATGAAGTGGGCGACGAGTAATAGCAGGAGAGA
TGGGAGGACGGAAAAGAGTTTGGAAAAGCACGTCCCGGAAGAAGTCTGTG
AAGAAATAGGAATTTCCTCTGTGTCGTCTCTCTCTCCTC
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protein sequence of NO02G00130.2

>NO02G00130.2-protein ID=NO02G00130.2-protein|Name=NO02G00130.2|organism=Nannochloropsis oceanica|type=polypeptide|length=687bp
MHCRLQVVEEDGKGKGSKDDEENENGISLNHHQCEEADEQPRGLSIRLTD
TSTYGTHVNGATVGKEKSVFLQDGDLVTLFRPRDARKPALSYIYRARPEG
RTQRGYWARRHDDAFNAAAAAAAAPSTRRPSVSPSLVPDSAPPSLPPSSS
TGTGSVLEEMRKKNVGLQERMEALEEEGKAAKTRVQEAESAMGKQKEAHA
TAIEALQAELASFQAAAAQAEAGKEGGKEEGEAAALREELAAHQSIVEGL
RLRVGEKERAVSELQQDKVELEEKVAELGGSLATERRERDRVNTALEKET
SKAKTLEAKAEELKIANIALEEDYNRVSSELRREREEKEDARRLLEENNS
ALTAHEGVKGELMELRTIVENQKEELERKRKEVDRLRGHVSKHEAVLEEK
LAAQQQTKAAEKALEAKTRELNTLSSRLSSLQSFQAATTDEVASLRTAKS
ALEASRDNLASAVTDMEGKWKEAAEKVKHLRDRVSQLETGKEAMVESHNR
FQTAVSLFSADLVTFLHPAASPSLPPSSSSMPATQQPPPLQQQQQQPPSP
TQMSTSISQTEEREEVVKEGGGKKKREREERGLGVIGEEGGGEVEEEEES
ALMIEGGEEGGEGGKEEEVEAEEEQAKRRKVEEARAKGVQVLDLSEEDEG
EEHDNETMKAGHREDELEEGEEEEVTIMSGHTKMTR*
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protein sequence of NO02G00130.1

>NO02G00130.1-protein ID=NO02G00130.1-protein|Name=NO02G00130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bp
MPQTNHDPALITRSENSTPTLPLPYGVLTLEYSGNTVPSELQGVPTKLFL
ARSSHTVGRIAAPGAAADGVGEGKKGTVPVKVPRHYVINKAYISSMHCRL
QVVEEDGKGKGSKDDEENENGISLNHHQCEEADEQPRGLSIRLTDTSTYG
THVNGATVGKEKSVFLQDGDLVTLFRPRDARKPALSYIYRARPEGRTQRG
YWARRHDDAFNAAAAAAAAPSTRRPSVSPSLVPDSAPPSLPPSSSTGTGS
VLEEMRKKNVGLQERMEALEEEGKAAKTRVQEAESAMGKQKEAHATAIEA
LQAELASFQAAAAQAEAGKEGGKEEGEAAALREELAAHQSIVEGLRLRVG
EKERAVSELQQDKVELEEKVAELGGSLATERRERDRVNTALEKETSKAKT
LEAKAEELKIANIALEEDYNRVSSELRREREEKEDARRLLEENNSALTAH
EGVKGELMELRTIVENQKEELERKRKEVDRLRGHVSKHEAVLEEKLAAQQ
QTKAAEKALEAKTRELNTLSSRLSSLQSFQAATTDEVASLRTAKSALEAS
RDNLASAVTDMEGKWKEAAEKVKHLRDRVSQLETGKEAMVESHNRFQTAV
SLFSADLVTFLHPAASPSLPPSSSSMPATQQPPPLQQQQQQPPSPTQMST
SISQTEEREEVVKEGGGKKKREREERGLGVIGEEGGGEVEEEEESALMIE
GGEEGGEGGKEEEVEAEEEQAKRRKVEEARAKGVQVLDLSEEDEGEEHDN
ETMKAGHREDELEEGEEEEVTIMSGHTKMTR*
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Synonyms
Publications