NO02G00020, NO02G00020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO02G00020 vs. NCBI_GenBank
Match: EWM30668.1 (calcium-binding endonuclease exonuclease phosphatase family protein [Nannochloropsis gaditana]) HSP 1 Score: 490.7 bits (1262), Expect = 6.200e-135 Identity = 289/564 (51.24%), Postives = 353/564 (62.59%), Query Frame = 0 Query: 32 QALGFRASHHRHRPSSSLAAFSTPPNRPSPTSNEGEDKTGSPSLAANSGVGTTVRCISSTESHSKSMRPGNMSPPPLSPGSPSLLPLLYPAA----PHSSAPTXXXXXXXXXXXXXXXXXXXXXXXXXXISTFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMARRRPSVVGKGELEDGKVIRPLATASSSFSSSFLQSLWSGRRGAGGDSERGEGQEKKEEGDGKETRGAAPGIMGGVGQRRWTEFVPASSWCREKRRERAMPHSFSSFSSPISPSPSASSVVWGRERGGAAECV-DALLPSVEVVDVALYPPSLCSRKWPKEFGERISDHRPLKAALNVTRIM 591 +A G + RH SLAAF TPP + G+ P +S + T+ C +++ + + P S PPL S + PL+ P +P ISTFNILAPCYKRM+DGGREADFPE ME RA++TA FIR ELDTDIICLQEFF+ DE YT+LF S+LAD YDFYLHPRPSKKDGLGVLL+KGKFR+H RGATLSRWGSRVGLLMDLE G + EGQR++LLSTHLSFPHNRFDENQQHRQV SLTRMLE YVKG A+ G++ +LQ+LCGDFNVDLT+PVL PIHALGF+HV GE RG GA+ VTHRTHRG+DVAVDHIF+RS+++ RRR G ED + P + S S W+ RR A ++ EG + + G+E + ++GG GQR W +F+P SSW R + R+ P + S+ SASSVVWG E A V +A +PSV V+DVAL P SL WP+EFGE+ISDHRPL+A+LNVTR + Sbjct: 32 EAAGSLFATPRHHRPPSLAAFGTPPPPRPSVAAPGK----IPGTXPSSSLPATLSCNAASVTSRPYVMP---SAPPLQKSS-EVTPLITSTTCLPYPSLLSPPISSSLSIASTPCPPPLQYKLTQQDISISTFNILAPCYKRMKDGGREADFPERMESRALETAAFIRRELDTDIICLQEFFVQDEGYTTLFSSSLADAYDFYLHPRPSKKDGLGVLLRKGKFRLHGARGATLSRWGSRVGLLMDLETLA----GATSEQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYVKGCPALGGQRDVLQILCGDFNVDLTNPVLAPIHALGFQHVREEGE-RGDGAD-----FVTHRTHRGDDVAVDHIFYRSFNAARHRRR-GATGNTSEEDPRSRGPEGATIAFPLHSSWPSFWARRRSA----DKREGPLQGGDPGGREKTEGSTHVIGGAGQRTWKDFIPTSSWSRARWNARSRP-MYGPASTKSPRRSSASSVVWGAEEAKAGAGVSEASVPSVAVMDVALCPISLDVGTWPREFGEKISDHRPLRASLNVTRFL 571
BLAST of NO02G00020 vs. NCBI_GenBank
Match: CBJ29581.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 152.1 bits (383), Expect = 5.300e-33 Identity = 102/285 (35.79%), Postives = 145/285 (50.88%), Query Frame = 0 Query: 157 ISTFNILAPCYKRM----------------------QDGGREADFPEYMERRAIDTATFI-REELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPS-KKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRML-QVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMARRRPSV 417 ++TFN+LAPCYKRM Q RE++F RA++T FI R +DIICLQEF++ D AY ++F S L Y+FY R K DG+ VLL++GKF V + G +LS G+RV L+M L + G G+ ++L++THL+FPHN D Q Q+ ++T +E G G M +V+ GD NV+ T PV + GFR + + ++THR HRGE+V DH+F ++ RR SV Sbjct: 66 LTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWL-DPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQLGLSLSSIGNRVALIMHL-----RESGAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVE----GVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRE--------RRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSV 332
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_001634163.1 (predicted protein [Nematostella vectensis] >EDO42100.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 116.7 bits (291), Expect = 2.400e-22 Identity = 84/264 (31.82%), Postives = 130/264 (49.24%), Query Frame = 0 Query: 158 STFNILAPCYKRMQD--GGREADFPEYMERRAIDTATFIREELDTDIICLQEF-FMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMARRRPSVV 418 +TFNILAPCY R++ E+ P RR+ ++E+ D ICLQEF F HD LF S L D Y L + K DGL +LL + + V+ +G+RV LL+ + +K +V+L +TH+S+ HN DE + QV + ++ ++K +E + +L GDFN T+PV + GF A + V + G VTH+ HRG +++VD+IF+R+ S + S++ Sbjct: 16 ATFNILAPCYNRLRGWWSAWESSKPNLYMRRSQSIIDMLKEQPHLDAICLQEFWFNHD--VEDLFESKLGDKYRILKLKRQGYKMDGLAILLHRSA-SLLGVQSFNFDDYGNRVALLLHIALPDQDK----------QVILATTHISYCHNILDEYVRMSQVKKVVSGIDKFLKQKEL----HSIPVILTGDFNSPETNPVYQFVKGSGF-----ASSYKVVNGREAG---VTHKDHRGRELSVDYIFYRNSGSCAISPKSSIM 254
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_020914345.1 (uncharacterized calcium-binding protein At1g02270-like [Exaiptasia pallida] >KXJ22722.1 putative calcium-binding protein [Exaiptasia pallida]) HSP 1 Score: 116.3 bits (290), Expect = 3.200e-22 Identity = 78/253 (30.83%), Postives = 122/253 (48.22%), Query Frame = 0 Query: 158 STFNILAPCYKRM--QDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDS 408 +TFNILAPCY+R+ Q E+ P R I ++ D ICLQEF+ + +A LF + L D Y L + K DGL + + + R+ A + + +G RV LL+ LE G V+L +THLS+ HN FD+ + Q + + +Y++ + + +LCGDFN +PV + GF R +PLVTH+ H G++++VD++F+R+ S Sbjct: 31 ATFNILAPCYRRLEGQYSKWESSQPNLYMERLQSIIQLISQQPKLDTICLQEFWFNSDA-LELFENKLGDRYKIIKLKRQGEKTDGLAIFVDR-SLRILATQSLRFNDYGYRVALLLHLE----------LPDNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERDDI----EAPPVILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGR--------EPLVTHKDHTGQEMSVDYVFYRNSGS 259
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_020915399.1 (uncharacterized calcium-binding protein At1g02270-like, partial [Exaiptasia pallida]) HSP 1 Score: 114.8 bits (286), Expect = 9.300e-22 Identity = 78/254 (30.71%), Postives = 121/254 (47.64%), Query Frame = 0 Query: 158 STFNILAPCYKRM--QDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDE----NQQHRQVLSLTRMLETYVKGQ--EAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFF 403 +TFNILAPCY+R+ Q E+ P R I ++ D ICLQEF+ + +A LF + L D Y L + K DGL + + + R+ A + + +G RV LL+ LE G V+L +THLS+ HN FD+ +Q + V + +E Y++ + + +LCGDFN +PV + GF R +PLVTH+ H G++++VD++F+ Sbjct: 31 ATFNILAPCYRRLEGQYSKWESSQPNLYMERLQSIIQLISQQPKLDTICLQEFWFNSDA-LELFENKLGDRYKIIKLKRQGEKTDGLAIFVDR-SLRILATQSLRFNDYGYRVALLLHLE----------LPDNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERYIRNYPFSCRDDXEAPPXILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGR--------EPLVTHKDHTGQEMSVDYVFY 264
BLAST of NO02G00020 vs. NCBI_GenBank
Match: KXJ06717.1 (putative calcium-binding protein, partial [Exaiptasia pallida]) HSP 1 Score: 114.0 bits (284), Expect = 1.600e-21 Identity = 76/248 (30.65%), Postives = 119/248 (47.98%), Query Frame = 0 Query: 158 STFNILAPCYKRM--QDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFF 403 +TFNILAPCY+R+ Q E+ P R I ++ D ICLQEF+ + +A LF + L D Y L + K DGL + + + R+ A + + +G RV LL+ LE G V+L +THLS+ HN FD+ + Q + + +Y++ + + +LCGDFN +PV + GF R +PLVTH+ H G++++VD++F+ Sbjct: 15 ATFNILAPCYRRLEGQYSKWESSQPNLYMERLQSIIQLISQQPKLDTICLQEFWFNSDA-LELFENKLGDRYKIIKLKRQGEKTDGLAIFVDR-SLRILATQSLRFNDYGYRVALLLHLE----------LPDNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERDD----XEAPPXILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGR--------EPLVTHKDHTGQEMSVDYVFY 238
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_004990178.1 (hypothetical protein PTSG_08794 [Salpingoeca rosetta] >EGD77702.1 hypothetical protein PTSG_08794 [Salpingoeca rosetta]) HSP 1 Score: 112.5 bits (280), Expect = 4.600e-21 Identity = 86/280 (30.71%), Postives = 123/280 (43.93%), Query Frame = 0 Query: 157 ISTFNILAPCYKRMQDGG-READFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEA-------------------AVDEKMGQK---------ATGEGQ-RVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYD 407 I+TFN+LAPCYKR+ RE+DFP R +RE+ D D+I LQEF+ H + S++ + L Y + RP +D V+ + +V R G RV LL+ L A+D G+G ++L +TH SFPH + Q+H L R+L T V Q+ + VL GDFN ++ + + G+ + A R + VTHRTH+GEDV VD +F RS D Sbjct: 99 IATFNVLAPCYKRLPSTQLRESDFPSLYRPRNAAILRMLREQRDLDVIALQEFWFHHDV-QSMYMAALGSGYHVHCLQRPKGRDDGVVVFVRNHIQVVGTRRLHFDDSGMRVALLLHLRVRGSTPTPIAPYLIRGTHAEALDNTNDADIAAVPHQPCPAGDGSVDLILANTHFSFPHTQ----QEHEARLQQARVLATSV--QDFAREQGVGTSVLTGDFNGNVNSRSCAHLISCGYESLFHAVHDRELS--------VTHRTHKGEDVGVDFVFMRSDD 363
BLAST of NO02G00020 vs. NCBI_GenBank
Match: CCI41493.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 105.9 bits (263), Expect = 4.300e-19 Identity = 76/246 (30.89%), Postives = 125/246 (50.81%), Query Frame = 0 Query: 157 ISTFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPS-KKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIF 402 + TFNILAPCY R G E+++ RA + FI+++ D+ICLQE++ +++Y ++FHS + + RP K+DGL +L+ K K +++ V + G RV ++M L Q +L+++HL+FPH E +Q R LS +++ ++G + + Q M +LCGDFN D PV + + G++ V R + +TH H+ +V VD IF Sbjct: 19 LMTFNILAPCYFR-HGGLVESEYEHLYVARAQELVQFIQKQC-CDVICLQEYWF-NQSYQNIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLKINFVNPI---QAGDRVAMMMHLTMKPLH----------QSFLLINSHLTFPHGH--EYKQTR--LSQIQLVLNSIQGYKDQHNLQEMPVLLCGDFN-DYNDPVHEKVLENGYQSVFQQIHGR--------EARITHCNHKNREVGVDFIF 235
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_002895679.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55141.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 104.8 bits (260), Expect = 9.600e-19 Identity = 81/258 (31.40%), Postives = 121/258 (46.90%), Query Frame = 0 Query: 157 ISTFNILAPCYKRMQDGGR-EADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRP-SKKDGLGVLLKKGKFRVHAVRGATL-SRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMAR 412 + TFN+LAPCY R GGR E+D RA + I+ E D++CLQEF+ E Y F + + RP K+DGL V + K KF +H V L G RV LLM + + +KA + + +++++HL+FPHN + + Q+ + + YV Q+ + + +LCGDFN D PV + G+ + A R + +TH H +V VD IF DS A+ Sbjct: 14 LMTFNLLAPCYFR--HGGRLESDDQVSFLSRAQASIRAIKRE-QCDVVCLQEFWFKHE-YQRAFRHAFQPTHYVHTAKRPGDKEDGLAVFVDKRKFELHNVESVDLVEEAGDRVALLMHVATKWNR---EKAPLDQRSFLVVNSHLTFPHNEMYASLRLSQIHRVLSAVRKYVARQDLCD----IPVLLCGDFN-DYNDPVYRLVTKHGYASLFAEMHGR--------EARITHCNHNNREVGVDFIFGARLDSDQAQ 251
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_017231959.1 (PREDICTED: uncharacterized calcium-binding protein At1g02270-like isoform X1 [Daucus carota subsp. sativus]) HSP 1 Score: 104.8 bits (260), Expect = 9.600e-19 Identity = 78/250 (31.20%), Postives = 122/250 (48.80%), Query Frame = 0 Query: 158 STFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADV-YDFYLHPRPSKK-DGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQ-PLVTHRTHRGEDVAVDHIFFRS 405 +TFNILAP YKR+ D E +FPE R + E+ + IICLQEF++ +E ++ L + Y Y R + + DGL + + F V + ++ G RV L+DLE E K G R++L++THL FPH+ + +QV + + +E+Y K + + +LCGD+N + V + + GF V A + +VG V+H HRG AVD ++ R+ Sbjct: 18 TTFNILAPIYKRLSDKNCENEFPELWVSRNESILDKLL-EIKSSIICLQEFWVGNEELVKMYEKRLGEAGYRTYKLARTNNRGDGLLAAVHQNSFHVLGYKECVINGIGDRVAQLLDLELVHPEDQIHKL---GMRMILVNTHLIFPHDYRYCFVRLKQVYKILQFIESYCKEYKL----PAVPIILCGDWNGSMKGNVCRFLLSQGF--VSAYDIAHPYMGHNVGNCKWVSHHNHRGNICAVDFVWLRN 257 The following BLAST results are available for this feature:
BLAST of NO02G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO02G00020 ID=NO02G00020|Name=NO02G00020|organism=Nannochloropsis oceanica|type=gene|length=2034bpback to top protein sequence of NO02G00020.1 >NO02G00020.1-protein ID=NO02G00020.1-protein|Name=NO02G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=591bpback to top Synonyms
Publications
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