NO02G00020, NO02G00020 (gene) Nannochloropsis oceanica

Overview
NameNO02G00020
Unique NameNO02G00020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2034
Alignment locationchr2:5724..7757 -

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Properties
Property NameValue
DescriptionCalcium-binding endonuclease exonuclease phosphatase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:5724..7757 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR005135Endo/exonuclease/phosphatase
Vocabulary: Biological Process
TermDefinition
GO:0090305nucleic acid phosphodiester bond hydrolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004527exonuclease activity
GO:0004519endonuclease activity
Homology
BLAST of NO02G00020 vs. NCBI_GenBank
Match: EWM30668.1 (calcium-binding endonuclease exonuclease phosphatase family protein [Nannochloropsis gaditana])

HSP 1 Score: 490.7 bits (1262), Expect = 6.200e-135
Identity = 289/564 (51.24%), Postives = 353/564 (62.59%), Query Frame = 0
Query:   32 QALGFRASHHRHRPSSSLAAFSTPPNRPSPTSNEGEDKTGSPSLAANSGVGTTVRCISSTESHSKSMRPGNMSPPPLSPGSPSLLPLLYPAA----PHSSAPTXXXXXXXXXXXXXXXXXXXXXXXXXXISTFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMARRRPSVVGKGELEDGKVIRPLATASSSFSSSFLQSLWSGRRGAGGDSERGEGQEKKEEGDGKETRGAAPGIMGGVGQRRWTEFVPASSWCREKRRERAMPHSFSSFSSPISPSPSASSVVWGRERGGAAECV-DALLPSVEVVDVALYPPSLCSRKWPKEFGERISDHRPLKAALNVTRIM 591
            +A G   +  RH    SLAAF TPP      +  G+     P    +S +  T+ C +++ +    + P   S PPL   S  + PL+        P   +P                           ISTFNILAPCYKRM+DGGREADFPE ME RA++TA FIR ELDTDIICLQEFF+ DE YT+LF S+LAD YDFYLHPRPSKKDGLGVLL+KGKFR+H  RGATLSRWGSRVGLLMDLE       G  +  EGQR++LLSTHLSFPHNRFDENQQHRQV SLTRMLE YVKG  A+ G++ +LQ+LCGDFNVDLT+PVL PIHALGF+HV   GE RG GA+      VTHRTHRG+DVAVDHIF+RS+++   RRR    G    ED +   P     +    S   S W+ RR A    ++ EG  +  +  G+E    +  ++GG GQR W +F+P SSW R +   R+ P  +   S+      SASSVVWG E   A   V +A +PSV V+DVAL P SL    WP+EFGE+ISDHRPL+A+LNVTR +
Sbjct:   32 EAAGSLFATPRHHRPPSLAAFGTPPPPRPSVAAPGK----IPGTXPSSSLPATLSCNAASVTSRPYVMP---SAPPLQKSS-EVTPLITSTTCLPYPSLLSPPISSSLSIASTPCPPPLQYKLTQQDISISTFNILAPCYKRMKDGGREADFPERMESRALETAAFIRRELDTDIICLQEFFVQDEGYTTLFSSSLADAYDFYLHPRPSKKDGLGVLLRKGKFRLHGARGATLSRWGSRVGLLMDLETLA----GATSEQEGQRIILLSTHLSFPHNRFDENQQHRQVSSLTRMLEAYVKGCPALGGQRDVLQILCGDFNVDLTNPVLAPIHALGFQHVREEGE-RGDGAD-----FVTHRTHRGDDVAVDHIFYRSFNAARHRRR-GATGNTSEEDPRSRGPEGATIAFPLHSSWPSFWARRRSA----DKREGPLQGGDPGGREKTEGSTHVIGGAGQRTWKDFIPTSSWSRARWNARSRP-MYGPASTKSPRRSSASSVVWGAEEAKAGAGVSEASVPSVAVMDVALCPISLDVGTWPREFGEKISDHRPLRASLNVTRFL 571          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: CBJ29581.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 152.1 bits (383), Expect = 5.300e-33
Identity = 102/285 (35.79%), Postives = 145/285 (50.88%), Query Frame = 0
Query:  157 ISTFNILAPCYKRM----------------------QDGGREADFPEYMERRAIDTATFI-REELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPS-KKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRML-QVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMARRRPSV 417
            ++TFN+LAPCYKRM                      Q   RE++F      RA++T  FI R    +DIICLQEF++ D AY ++F S L   Y+FY   R   K DG+ VLL++GKF V +  G +LS  G+RV L+M L      + G      G+ ++L++THL+FPHN  D   Q  Q+ ++T  +E    G     G   M  +V+ GD NV+ T PV   +   GFR    +            + ++THR HRGE+V  DH+F ++      RR  SV
Sbjct:   66 LTTFNLLAPCYKRMHSEVSTPVGGVGTGLLANRAKGQRTARESEFDGVWRERALETVDFICRHMSSSDIICLQEFWL-DPAYHAIFQSALEKDYEFYTVKRTGLKSDGVAVLLRRGKFDVLSQLGLSLSSIGNRVALIMHL-----RESGAGGGEVGEDMILVNTHLAFPHNALDRVNQMSQIRAVTDTVE----GVMVEAGLPTMTPRVVVGDLNVEETDPVCGHLGRNGFRSAFTSLHRE--------RRVITHRNHRGEEVMCDHVFVKAPGFAGRRRGDSV 332          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_001634163.1 (predicted protein [Nematostella vectensis] >EDO42100.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 116.7 bits (291), Expect = 2.400e-22
Identity = 84/264 (31.82%), Postives = 130/264 (49.24%), Query Frame = 0
Query:  158 STFNILAPCYKRMQD--GGREADFPEYMERRAIDTATFIREELDTDIICLQEF-FMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMARRRPSVV 418
            +TFNILAPCY R++      E+  P    RR+      ++E+   D ICLQEF F HD     LF S L D Y    L  +  K DGL +LL +    +  V+      +G+RV LL+ +     +K          +V+L +TH+S+ HN  DE  +  QV  +   ++ ++K +E       +  +L GDFN   T+PV   +   GF     A   + V   + G   VTH+ HRG +++VD+IF+R+  S     + S++
Sbjct:   16 ATFNILAPCYNRLRGWWSAWESSKPNLYMRRSQSIIDMLKEQPHLDAICLQEFWFNHD--VEDLFESKLGDKYRILKLKRQGYKMDGLAILLHRSA-SLLGVQSFNFDDYGNRVALLLHIALPDQDK----------QVILATTHISYCHNILDEYVRMSQVKKVVSGIDKFLKQKEL----HSIPVILTGDFNSPETNPVYQFVKGSGF-----ASSYKVVNGREAG---VTHKDHRGRELSVDYIFYRNSGSCAISPKSSIM 254          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_020914345.1 (uncharacterized calcium-binding protein At1g02270-like [Exaiptasia pallida] >KXJ22722.1 putative calcium-binding protein [Exaiptasia pallida])

HSP 1 Score: 116.3 bits (290), Expect = 3.200e-22
Identity = 78/253 (30.83%), Postives = 122/253 (48.22%), Query Frame = 0
Query:  158 STFNILAPCYKRM--QDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDS 408
            +TFNILAPCY+R+  Q    E+  P     R       I ++   D ICLQEF+ + +A   LF + L D Y    L  +  K DGL + + +   R+ A +    + +G RV LL+ LE              G  V+L +THLS+ HN FD+  +  Q   +   + +Y++  +     +    +LCGDFN    +PV   +   GF         R        +PLVTH+ H G++++VD++F+R+  S
Sbjct:   31 ATFNILAPCYRRLEGQYSKWESSQPNLYMERLQSIIQLISQQPKLDTICLQEFWFNSDA-LELFENKLGDRYKIIKLKRQGEKTDGLAIFVDR-SLRILATQSLRFNDYGYRVALLLHLE----------LPDNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERDDI----EAPPVILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGR--------EPLVTHKDHTGQEMSVDYVFYRNSGS 259          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_020915399.1 (uncharacterized calcium-binding protein At1g02270-like, partial [Exaiptasia pallida])

HSP 1 Score: 114.8 bits (286), Expect = 9.300e-22
Identity = 78/254 (30.71%), Postives = 121/254 (47.64%), Query Frame = 0
Query:  158 STFNILAPCYKRM--QDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDE----NQQHRQVLSLTRMLETYVKGQ--EAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFF 403
            +TFNILAPCY+R+  Q    E+  P     R       I ++   D ICLQEF+ + +A   LF + L D Y    L  +  K DGL + + +   R+ A +    + +G RV LL+ LE              G  V+L +THLS+ HN FD+    +Q  + V  +   +E Y++       +  +    +LCGDFN    +PV   +   GF         R        +PLVTH+ H G++++VD++F+
Sbjct:   31 ATFNILAPCYRRLEGQYSKWESSQPNLYMERLQSIIQLISQQPKLDTICLQEFWFNSDA-LELFENKLGDRYKIIKLKRQGEKTDGLAIFVDR-SLRILATQSLRFNDYGYRVALLLHLE----------LPDNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERYIRNYPFSCRDDXEAPPXILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGR--------EPLVTHKDHTGQEMSVDYVFY 264          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: KXJ06717.1 (putative calcium-binding protein, partial [Exaiptasia pallida])

HSP 1 Score: 114.0 bits (284), Expect = 1.600e-21
Identity = 76/248 (30.65%), Postives = 119/248 (47.98%), Query Frame = 0
Query:  158 STFNILAPCYKRM--QDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFY-LHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFF 403
            +TFNILAPCY+R+  Q    E+  P     R       I ++   D ICLQEF+ + +A   LF + L D Y    L  +  K DGL + + +   R+ A +    + +G RV LL+ LE              G  V+L +THLS+ HN FD+  +  Q   +   + +Y++  +     +    +LCGDFN    +PV   +   GF         R        +PLVTH+ H G++++VD++F+
Sbjct:   15 ATFNILAPCYRRLEGQYSKWESSQPNLYMERLQSIIQLISQQPKLDTICLQEFWFNSDA-LELFENKLGDRYKIIKLKRQGEKTDGLAIFVDR-SLRILATQSLRFNDYGYRVALLLHLE----------LPDNGYEVILTTTHLSYCHNFFDQYVRMSQAQKVVDGINSYMERDD----XEAPPXILCGDFNSPQENPVYKYVCQNGFTSSFKNVHGR--------EPLVTHKDHTGQEMSVDYVFY 238          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_004990178.1 (hypothetical protein PTSG_08794 [Salpingoeca rosetta] >EGD77702.1 hypothetical protein PTSG_08794 [Salpingoeca rosetta])

HSP 1 Score: 112.5 bits (280), Expect = 4.600e-21
Identity = 86/280 (30.71%), Postives = 123/280 (43.93%), Query Frame = 0
Query:  157 ISTFNILAPCYKRMQDGG-READFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPSKKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEA-------------------AVDEKMGQK---------ATGEGQ-RVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYD 407
            I+TFN+LAPCYKR+     RE+DFP     R       +RE+ D D+I LQEF+ H +   S++ + L   Y  +   RP  +D   V+  +   +V   R       G RV LL+ L                     A+D                 G+G   ++L +TH SFPH +    Q+H   L   R+L T V  Q+    +     VL GDFN ++       + + G+  +  A   R +         VTHRTH+GEDV VD +F RS D
Sbjct:   99 IATFNVLAPCYKRLPSTQLRESDFPSLYRPRNAAILRMLREQRDLDVIALQEFWFHHDV-QSMYMAALGSGYHVHCLQRPKGRDDGVVVFVRNHIQVVGTRRLHFDDSGMRVALLLHLRVRGSTPTPIAPYLIRGTHAEALDNTNDADIAAVPHQPCPAGDGSVDLILANTHFSFPHTQ----QEHEARLQQARVLATSV--QDFAREQGVGTSVLTGDFNGNVNSRSCAHLISCGYESLFHAVHDRELS--------VTHRTHKGEDVGVDFVFMRSDD 363          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: CCI41493.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.9 bits (263), Expect = 4.300e-19
Identity = 76/246 (30.89%), Postives = 125/246 (50.81%), Query Frame = 0
Query:  157 ISTFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPS-KKDGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIF 402
            + TFNILAPCY R   G  E+++      RA +   FI+++   D+ICLQE++  +++Y ++FHS     +  +   RP  K+DGL +L+ K K +++ V      + G RV ++M L                Q  +L+++HL+FPH    E +Q R  LS  +++   ++G +  +  Q M  +LCGDFN D   PV + +   G++ V      R        +  +TH  H+  +V VD IF
Sbjct:   19 LMTFNILAPCYFR-HGGLVESEYEHLYVARAQELVQFIQKQC-CDVICLQEYWF-NQSYQNIFHSAFQHSHTIHTIKRPGIKQDGLAILVNKQKLKINFVNPI---QAGDRVAMMMHLTMKPLH----------QSFLLINSHLTFPHGH--EYKQTR--LSQIQLVLNSIQGYKDQHNLQEMPVLLCGDFN-DYNDPVHEKVLENGYQSVFQQIHGR--------EARITHCNHKNREVGVDFIF 235          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_002895679.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY55141.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 104.8 bits (260), Expect = 9.600e-19
Identity = 81/258 (31.40%), Postives = 121/258 (46.90%), Query Frame = 0
Query:  157 ISTFNILAPCYKRMQDGGR-EADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRP-SKKDGLGVLLKKGKFRVHAVRGATL-SRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHIFFRSYDSTMAR 412
            + TFN+LAPCY R   GGR E+D       RA  +   I+ E   D++CLQEF+   E Y   F       +  +   RP  K+DGL V + K KF +H V    L    G RV LLM +    +    +KA  + +  +++++HL+FPHN    + +  Q+  +   +  YV  Q+  +    +  +LCGDFN D   PV   +   G+  + A    R        +  +TH  H   +V VD IF    DS  A+
Sbjct:   14 LMTFNLLAPCYFR--HGGRLESDDQVSFLSRAQASIRAIKRE-QCDVVCLQEFWFKHE-YQRAFRHAFQPTHYVHTAKRPGDKEDGLAVFVDKRKFELHNVESVDLVEEAGDRVALLMHVATKWNR---EKAPLDQRSFLVVNSHLTFPHNEMYASLRLSQIHRVLSAVRKYVARQDLCD----IPVLLCGDFN-DYNDPVYRLVTKHGYASLFAEMHGR--------EARITHCNHNNREVGVDFIFGARLDSDQAQ 251          
BLAST of NO02G00020 vs. NCBI_GenBank
Match: XP_017231959.1 (PREDICTED: uncharacterized calcium-binding protein At1g02270-like isoform X1 [Daucus carota subsp. sativus])

HSP 1 Score: 104.8 bits (260), Expect = 9.600e-19
Identity = 78/250 (31.20%), Postives = 122/250 (48.80%), Query Frame = 0
Query:  158 STFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDTDIICLQEFFMHDEAYTSLFHSTLADV-YDFYLHPRPSKK-DGLGVLLKKGKFRVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLSFPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDLTHPVLDPIHALGFRHVMAAGESRGVGAEDVGQ-PLVTHRTHRGEDVAVDHIFFRS 405
            +TFNILAP YKR+ D   E +FPE    R       +  E+ + IICLQEF++ +E    ++   L +  Y  Y   R + + DGL   + +  F V   +   ++  G RV  L+DLE    E    K    G R++L++THL FPH+      + +QV  + + +E+Y K  +       +  +LCGD+N  +   V   + + GF  V A   +      +VG    V+H  HRG   AVD ++ R+
Sbjct:   18 TTFNILAPIYKRLSDKNCENEFPELWVSRNESILDKLL-EIKSSIICLQEFWVGNEELVKMYEKRLGEAGYRTYKLARTNNRGDGLLAAVHQNSFHVLGYKECVINGIGDRVAQLLDLELVHPEDQIHKL---GMRMILVNTHLIFPHDYRYCFVRLKQVYKILQFIESYCKEYKL----PAVPIILCGDWNGSMKGNVCRFLLSQGF--VSAYDIAHPYMGHNVGNCKWVSHHNHRGNICAVDFVWLRN 257          
The following BLAST results are available for this feature:
BLAST of NO02G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30668.16.200e-13551.24calcium-binding endonuclease exonuclease phosphata... [more]
CBJ29581.15.300e-3335.79conserved unknown protein [Ectocarpus siliculosus][more]
XP_001634163.12.400e-2231.82predicted protein [Nematostella vectensis] >EDO421... [more]
XP_020914345.13.200e-2230.83uncharacterized calcium-binding protein At1g02270-... [more]
XP_020915399.19.300e-2230.71uncharacterized calcium-binding protein At1g02270-... [more]
KXJ06717.11.600e-2130.65putative calcium-binding protein, partial [Exaipta... [more]
XP_004990178.14.600e-2130.71hypothetical protein PTSG_08794 [Salpingoeca roset... [more]
CCI41493.14.300e-1930.89unnamed protein product [Albugo candida][more]
XP_002895679.19.600e-1931.40conserved hypothetical protein [Phytophthora infes... [more]
XP_017231959.19.600e-1931.20PREDICTED: uncharacterized calcium-binding protein... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR068ncniR068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006568NSK006568Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G00020.1NO02G00020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643084gene_10160Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100091g14gene3Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G00020.1NO02G00020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G00020 ID=NO02G00020|Name=NO02G00020|organism=Nannochloropsis oceanica|type=gene|length=2034bp
ATGCCCGGCAGACGCCGGCGAGCCCCAACCCCTGCGCCTTGGCAACGCAA
GGCTTCTGCTGCCGCACTCCTCCTTTGTTGCTGCATGGGCAATCAAGCCT
TGGGCTTCAGGGCTTCGCATCACCGTCATCGACCCTCGTCTTCCCTCGCT
GCCTTTAGCACGCCTCCCAACCGGCCCTCTCCAACCAGCAATGAAGGGGA
AGACAAGACGGGCAGCCCCTCCTTGGCGGCCAATTCAGGTGTCGGGACAA
CGGTCAGGTGTATCAGTAGCACGGAAAGgtgggtgggggtgcggggatgg
ggggatgaggatagaatgggagaaggatttcgtgacggaaaacatacaca
catgtgcgtatatacgtgcccaattactgtttggcagctttcccttctag
taacgtgcttacctccaccctctcacaccaaagCCACAGCAAGTCAATGC
GGCCTGGTAACATGTCGCCCCCACCATTATCACCAGGATCTCCGTCCCTC
TTGCCCTTGCTCTACCCTGCCGCTCCCCACTCCTCTGCGCCTACAGCCTC
CTCCTCCCTCTGCTCATCAACATCCATGCAGCAGCAACAGCAGCGGCCAC
AGCCAGAGCAGCAGAGCCTGAGCATATCTACCTTCAACATCTTGGCACCT
TGCTACAAGCGGATGCAGGACGGCGGCCGCGAGGCGGACTTCCCCGAATA
CATGGAGAGGCGCGCTATTGACACGGCCACCTTCATCAGgtgcgtaaaaa
tgatacagcgcacatttgttgcctgggcctttctcttcactcctttcccc
ctgcattcaagtcctattttaaatctgttcctccccccgtcacagGGAAG
AGCTGGACACGGACATCATCTGCCTACAAGAGTTTTTCATGCATGATGAG
GCCTACACTTCGCTTTTCCACTCCACCCTGGCTGATGTTTACGACTTCTA
CTTACATCCACGACCGAGCAAGAAGGACGGGCTGGGCGTGCTACTAAAAA
AAGGCAAATTCCGCGTCCACGCTGTGCGCGGTGCCACGCTTTCTCGCTGG
GGCAGTCGGGTGGGACTACTCATGGATCTGGAAGCCGCGGTCGACGAGAA
AATGGGACAAAAGGCGACGGGGGAGGGCCAGCGTGTAGTGTTGCTGAGCA
CGCACCTGTCCTTCCCGCATAACCGGTTCGACGAGAACCAGCAGCACCGG
CAGGTTCTGAGCCTCACGCGCATGCTTGAAACCTACGTCAAGGGCCAGGA
GGCGGTGAATGGGCGTCAGCGCATGCTGCAGGTCCTCTGTGGCGACTTCA
ACGTAGACCTGACACACCCCGTTCTTGACCCTATCCATGCCCTCGGCTTC
AGGCACGTGATGGCCGCTGGCGAGAGCAGGGGAGTAGGGGCCGAGGACGT
TGGGCAGCCTCTTGTCACCCACCGCACACACCGTGGGGAGGATGTAGCTG
TAGACCACATCTTCTTCAGAAGTTACGACTCGACCATGGCGCGGAGGCGG
CCATCAGTGGTGGGGAAGGGGGAGTTGGAGGATGGGAAAGTAATCAGGCC
TCTGGCTACTGCCTCGTCGTCCTTCTCGTCGTCCTTCTTGCAGAGTCTAT
GGTCAGGAAGAAGGGGGGCAGGAGGTGACTCGGAGAGAGGTGAGGGACAG
GAGAAGAAGGAAGAAGGCGATGGAAAGGAAACACGAGGAGCAGCACCAGG
GATAATGGGAGGTGTAGGGCAACGGCGGTGGACAGAATTTGTGCCCGCGT
CGAGCTGGTGCCGTGAAAAGAGAAGGGAAAGGGCAATGCCGCATTCCTTC
TCTTCCTTCTCCTCTCCTATTTCCCCCAGTCCTTCGGCGTCCTCAGTGGT
GTGGGGGCGAGAAAGAGGGGGCGCCGCAGAATGTGTGGACGCACTGCTGC
CGTCGGTGGAAGTCGTCGATGTGGCGCTGTACCCGCCTTCTTTGTGCTCG
AGGAAGTGGCCGAAAGAGTTTGGCGAGAGGATTTCTGACCATCGGCCCCT
TAAGGCAGCACTGAATGTGACGCGAATAATGTAA
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protein sequence of NO02G00020.1

>NO02G00020.1-protein ID=NO02G00020.1-protein|Name=NO02G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=591bp
MPGRRRRAPTPAPWQRKASAAALLLCCCMGNQALGFRASHHRHRPSSSLA
AFSTPPNRPSPTSNEGEDKTGSPSLAANSGVGTTVRCISSTESHSKSMRP
GNMSPPPLSPGSPSLLPLLYPAAPHSSAPTASSSLCSSTSMQQQQQRPQP
EQQSLSISTFNILAPCYKRMQDGGREADFPEYMERRAIDTATFIREELDT
DIICLQEFFMHDEAYTSLFHSTLADVYDFYLHPRPSKKDGLGVLLKKGKF
RVHAVRGATLSRWGSRVGLLMDLEAAVDEKMGQKATGEGQRVVLLSTHLS
FPHNRFDENQQHRQVLSLTRMLETYVKGQEAVNGRQRMLQVLCGDFNVDL
THPVLDPIHALGFRHVMAAGESRGVGAEDVGQPLVTHRTHRGEDVAVDHI
FFRSYDSTMARRRPSVVGKGELEDGKVIRPLATASSSFSSSFLQSLWSGR
RGAGGDSERGEGQEKKEEGDGKETRGAAPGIMGGVGQRRWTEFVPASSWC
REKRRERAMPHSFSSFSSPISPSPSASSVVWGRERGGAAECVDALLPSVE
VVDVALYPPSLCSRKWPKEFGERISDHRPLKAALNVTRIM*
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Synonyms
Publications