NO01G05860, NO01G05860 (gene) Nannochloropsis oceanica

Overview
NameNO01G05860
Unique NameNO01G05860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4714
Alignment locationchr1:1645937..1650650 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibose-phosphate pyrophosphokinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1645937..1650650 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009165nucleotide biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0004749ribose phosphate diphosphokinase activity
Vocabulary: INTERPRO
TermDefinition
IPR029057PRTase-like
IPR005946Rib-P_diPkinase
IPR029099Pribosyltran_N
Homology
BLAST of NO01G05860 vs. NCBI_GenBank
Match: EWM22811.1 (ribose-phosphate pyrophosphokinase [Nannochloropsis gaditana])

HSP 1 Score: 715.3 bits (1845), Expect = 1.500e-202
Identity = 378/505 (74.85%), Postives = 418/505 (82.77%), Query Frame = 0
Query:   42 SSGLKNSGTANPICGLKAAAVTAGQKNGQ-QGWTRRRLWRGEGIEAGAEELARWNAK-GRWMLGGGLTLLGALLLGSAGSNHTGMEEADEHEVEEEVYANEIADRMARRSNEKFEELKARWRWSAAAHQPVEDPRTIPNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFRDANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQERES 545
            S+ L    +++P CG        G KNG  QG  R   W              W +K G WMLG     +  L LG+ G+    M+E DE EVEE  YA+E+A+R+ARR++  FEELKA+WRWS AA  P +DP TI NLVVFSGSSHP+LAEE+CDYL+IPVG SVVKRFADGEVFIRILQEIRGRDCF+IIPTNSNDNVIELLLSISTM+RASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAA AAAYFV+NVP F RHA HP   +SS   SSR+  LNR  +LGP P+VTV+APHEGQVRRARIFRERLSKLLGPHVSVDMA+VSKFRDA+G + RQL+GDV GRTCIIVDDLLDTGKTLATTVDLLKGEGAD +YGFATHARFS+DGQ+RVQ+C NL+FVVVTNTMPLEG KSRAIEIHP+H+KIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQE +S
Sbjct:   46 SAWLSRGTSSSPTCG-----PFEGSKNGHWQGRNRNHAW--------------WPSKQGLWMLGA--LAVAGLHLGAKGT--ARMDEGDEREVEEGWYASEVAERLARRTSRTFEELKAKWRWS-AAEGPRQDPATISNLVVFSGSSHPLLAEEICDYLNIPVGNSVVKRFADGEVFIRILQEIRGRDCFVIIPTNSNDNVIELLLSISTMRRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAAAAAYFVENVPDFKRHALHPAGESSS---SSRYTVLNRATSLGPCPIVTVVAPHEGQVRRARIFRERLSKLLGPHVSVDMAMVSKFRDADGRIFRQLIGDVTGRTCIIVDDLLDTGKTLATTVDLLKGEGADRVYGFATHARFSRDGQKRVQECENLQFVVVTNTMPLEGGKSRAIEIHPLHDKIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQEMQS 523          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: XP_005854471.1 (ribose-phosphate pyrophosphokinase [Nannochloropsis gaditana CCMP526] >EKU21888.1 ribose-phosphate pyrophosphokinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 522.7 bits (1345), Expect = 1.400e-144
Identity = 298/474 (62.87%), Postives = 328/474 (69.20%), Query Frame = 0
Query:  114 LGSAGSNHTGMEEADEHEVEEEVYANEIADRMARRSNEKFEELKARWRWSAAAHQPVEDPRTIPNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQI---------------------------------QGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFRDANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQERESVLEKSSSNSD 555
            L +     T M+E DE EVEE  YA+E+A+R+ARR++  FEELKA+WRWS AA  P +DP TI NLVVFSGSSHP+LAEE+CDYL+IPVG SVVKRFADGEVFIRILQEIRGRDCF+IIPTNSNDNVIELLLSISTM+RASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQI                                 QGFFSPRVPVDHLTPAA AAAYFV+NVP F RHA HP   +SS   SSR+  LNR  +LGP P+VTV+AP + +               GP     M L +                   RTCIIVDDLLDTGKTLATTVDLLKGEGAD +YGFATHA                                RAIEIHP+H+KIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQE +SVLEKS+SN +
Sbjct:    9 LSNRAKGITRMDEGDEREVEEGWYASEVAERLARRTSRTFEELKAKWRWS-AAEGPRQDPSTISNLVVFSGSSHPLLAEEICDYLNIPVGNSVVKRFADGEVFIRILQEIRGRDCFVIIPTNSNDNVIELLLSISTMRRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQKAVLTDNLFALVYPPSFSLPCSPRRVPSSEHLQGFFSPRVPVDHLTPAAAAAAYFVENVPDFKRHALHPAGVSSS---SSRYTVLNRATSLGPCPIVTVVAPTKDKFAALAFSANDFRSSWGP-----MCLST------------------WRTCIIVDDLLDTGKTLATTVDLLKGEGADRVYGFATHA--------------------------------RAIEIHPLHDKIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQEMQSVLEKSASNRE 423          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: GAX29611.1 (hypothetical protein FisN_2Hh170 [Fistulifera solaris])

HSP 1 Score: 266.9 bits (681), Expect = 1.400e-67
Identity = 153/362 (42.27%), Postives = 220/362 (60.77%), Query Frame = 0
Query:  180 VVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFRDANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFS----KDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSVVA 538
            ++ +GSS   +  ++   L +P+ +    +F DGEV I+I + +RG+  +II  T S D ++ELLL I T++RASAK++TAVIPY+GY+RQDQ+   RREPIAAADIA MLEE+GVDRV+ +DLH+  +QGFFSP  PV+HL PA VAAAYF            H E+   + +                 P +TV+A HEGQV RA  FR  L +L G +V + +   SK    +     +LVG+V GR CI+VDD+++TG T+ + ++ LK  GA+SIY +ATHA F      D  +R+Q+   LEF++V+N++  E           +  KI  L+VAPL+AEAI       S+SS+++
Sbjct:  172 IILAGSSSVDVGGDIAHLLGVPINQMHTGKFIDGEVNIQIQESVRGKHVYIINSTTSADALMELLLMIPTLRRASAKKVTAVIPYYGYSRQDQKHFRRREPIAAADIALMLEEMGVDRVICLDLHADSLQGFFSPTCPVEHLMPAPVAAAYF------------HEELMPRADEN---------------YPPITVVAAHEGQVARATQFRTVLQRLSGQNVDLAVLTKSKMAPGSSQYEAKLVGNVAGRKCILVDDIVNTGTTMVSNIEGLKQYGAESIYAWATHAVFGPPNVNDAPERLQELDELEFLLVSNSIATE---------RQLPPKIRVLNVAPLLAEAIARSLHNQSISSILS 497          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: GAX24899.1 (hypothetical protein FisN_2Lh170 [Fistulifera solaris])

HSP 1 Score: 266.2 bits (679), Expect = 2.300e-67
Identity = 152/362 (41.99%), Postives = 219/362 (60.50%), Query Frame = 0
Query:  180 VVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFRDANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFS----KDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSVVA 538
            ++ +GSS   +  ++   L +PV +    +F DGEV I+I + +RG+  +I+  T S D ++ELLL I T++RASAK++TAVIPY+GY+RQDQ+   RREPIAAADIA MLEE+GVDRV+ +DLH+  +QGFFSP  PV+HL PA VAAAYF            H E+     +                 P +TV+A HEGQV RA  FR  L +L G +V + +   SK    +     +LVG+V GR CI+VDD+++TG T+ + ++ LK  GA+SIY +ATHA F      D  +R+Q+   LEF++V+N++  +           +  KI  L+VAPL+AEAI       S+SS+++
Sbjct:  100 IILAGSSSVDVGGDIAHLLGVPVNQMHTGKFIDGEVNIQIQESVRGKHVYIVNSTTSADALMELLLMIPTLRRASAKKVTAVIPYYGYSRQDQKHFRRREPIAAADIALMLEEMGVDRVICLDLHADSLQGFFSPTCPVEHLMPAPVAAAYF------------HEELMPRVGEN---------------YPPITVVAAHEGQVARASQFRTVLQRLSGQNVDLAVLTKSKMAPGSSQYEAKLVGNVAGRKCILVDDIVNTGTTMVSNIEGLKQHGAESIYAWATHAVFGPPNVNDAPERLQELDELEFLLVSNSITTD---------RQLPPKIRVLNVAPLLAEAIARSLHNQSISSILS 425          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: XP_008862911.1 (hypothetical protein H310_01557 [Aphanomyces invadans] >ETW09106.1 hypothetical protein H310_01557 [Aphanomyces invadans])

HSP 1 Score: 256.9 bits (655), Expect = 1.400e-64
Identity = 157/370 (42.43%), Postives = 219/370 (59.19%), Query Frame = 0
Query:  169 PVEDPRTIPNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPT--NSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFR-DANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSV 536
            P + P+ +  L +FSG+++  LA +V + + + +GK  V+RFADGEV + + + +RG+D +I+ PT    N+N++ELLL +STM+RASA+RITAVIPY+GYARQD++    R PI+AAD+AR+LE +GVDRV++VDLH GQIQGFF PRVPVD+L    V  +YF                                +  + P     V++P  G V RA+ FRE L    G   +V +A++ K R  AN      LVG+V G  CIIVDD++DT  TL      L   GA ++Y FA+H  F+    +R+   A L+ VVV NT PL  +          ++KI QL VAPL+A+AILNIH   SVS +
Sbjct:   48 PEKQPKIMNGLKIFSGNANTELASKVAELVGVNLGKITVERFADGEVNVMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRASARRITAVIPYYGYARQDRKMA-ARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGLVGVSYF------------------------------GNMELVNP----VVVSPDAGGVARAKKFREWLVGKEGIE-NVGLAMIIKQRIKANEIDRMDLVGNVSGSDCIIVDDMIDTAGTLCKAAQHLSDHGARNVYAFASHGLFNGPASERITKSA-LKQVVVVNTTPLPATCVG-------NDKIKQLDVAPLLAQAILNIHGKKSVSQL 373          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: EWM29707.1 (phosphoribosylpyrophosphate synthetase [Nannochloropsis gaditana])

HSP 1 Score: 256.9 bits (655), Expect = 1.400e-64
Identity = 157/358 (43.85%), Postives = 214/358 (59.78%), Query Frame = 0
Query:  181 VFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNS--NDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFRDANGHVLR-QLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSV 536
            +FSG+++  LA E+   L + +GK  V RFADGEV + + + +RG+D +I+ PT S  N+N++ELLL +STM+R+SA+RITAVIPY+GYARQD++    R PI+AAD+AR+LE +GVDRVV+VDLH GQIQGFF PRVPVD+L    V  +YF D                        HN +             +++P  G V RA+ FRE L++     V   +A++ K R     V R  LVG V     +IVDD++DT  TLA   D+L   GA  +Y FA+H  FS    +R+   + LE VVV NT+PL  +       H  + KI QLSVAPLIA+AI NIH   S+S++
Sbjct:  106 LFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQDRKMQ-ARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGD---------------------KDLHNPV-------------IVSPDAGGVYRAKKFREGLAQKY--DVDAGLAMIIKQRARANEVDRMDLVGSVVDSDVVIVDDMIDTAGTLAKAADVLVANGARRVYSFASHGLFSGPANERISQ-SKLEEVVVLNTIPLTPA-------HEANAKIVQLSVAPLIAQAIYNIHQKKSISAL 418          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: XP_009821076.1 (hypothetical protein H257_00203 [Aphanomyces astaci] >ETV88676.1 hypothetical protein H257_00203 [Aphanomyces astaci])

HSP 1 Score: 256.1 bits (653), Expect = 2.400e-64
Identity = 157/370 (42.43%), Postives = 218/370 (58.92%), Query Frame = 0
Query:  169 PVEDPRTIPNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPT--NSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFR-DANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSV 536
            P + P+ +  L +FSG+++  LA +V + + + +GK  V+RFADGEV + + + +RG+D +I+ PT    N+N++ELLL +STM+RASA+RITAVIPY+GYARQD++    R PI+AAD+AR+LE +GVDRV++VDLH GQIQGFF PRVPVD+L    V  +YF                                +  + P     V++P  G V RA+ FRE L    G   +V +A++ K R  AN      LVG+V G  CIIVDD++DT  TL      L   GA ++Y FA+H  F+    +R+   A L+ VVV NT PL  +          + KI QL VAPL+A+AILNIH   SVS +
Sbjct:   48 PEKQPKIMNGLKIFSGNANTELASKVAELVGVNLGKITVERFADGEVNVMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRASARRITAVIPYYGYARQDRKMA-ARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGLVGVSYF------------------------------GNMELVNP----VVVSPDAGGVARAKKFREWLVGKEGIE-NVGLAMIIKQRIKANEIDRMDLVGNVSGSDCIIVDDMIDTAGTLCKAAQHLSDHGARNVYAFASHGLFNGPASERITASA-LKQVVVVNTTPLPANCVG-------NEKIKQLDVAPLLAQAILNIHGKKSVSQL 373          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: CEO99721.1 (hypothetical protein PBRA_007454 [Plasmodiophora brassicae])

HSP 1 Score: 255.4 bits (651), Expect = 4.100e-64
Identity = 156/378 (41.27%), Postives = 224/378 (59.26%), Query Frame = 0
Query:  177 PNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNS--NDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFRDANGHVL-RQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQERESVLEKSSS 552
            P  ++F+G+S+  LA EVC  LD+P+G+  V RFADGE+ ++I + +RGR  FII  T +  NDN+IEL+L ++  ++ASA+ ITA+IPYFGYARQD++T   R PI+AA +A ++E  GVDRVV+VDLH GQIQG F PR+PVD+L  A VA  +F +                           L R  +      VTV++P  G V RA+ F++ L +     +  + A++SK R   G +   +L+GDV G  CIIVDD++DT  TL    + L+  GAD +Y FATH  F+K+   R+ D +  + VVV NT+PL+ +            KI QLS+  L+AEAI  IH+  SVS V +G+ +  +    +SS
Sbjct:   40 PAPLIFAGTSNEPLAREVCQELDVPLGRMRVGRFADGEISVQIEETVRGRSVFIIQSTCTPVNDNIIELVLMVNAFRKASAQTITAIIPYFGYARQDRKT--ARVPISAAAVAHLIETSGVDRVVAVDLHCGQIQGMFGPRLPVDNLGGAIVALPHFTE--------------------------VLQRRES----SKVTVVSPDAGGVERAKKFQDGLRRF---GIDAEFAMISKTRSGAGVIASMKLIGDVSGSDCIIVDDMIDTAGTLVEAGNTLRAAGADRVYAFATHGLFNKNALDRI-DASVFDEVVVCNTVPLQKTVP----------KITQLSLGGLLAEAIDRIHNHRSVSVVFSGNTDFRTENSAASS 371          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: CCI48823.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 255.0 bits (650), Expect = 5.400e-64
Identity = 155/361 (42.94%), Postives = 215/361 (59.56%), Query Frame = 0
Query:  176 IPNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPT--NSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFR-DANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVS 534
            I  L +FSG+++  LAE V   + + +GK  V RF DGEV + + + +RG+D +I+ PT    N++++ELLL +STM+R+SA+RITA+IPY+GYARQD++    R PI+AAD+AR+LE +GVDRV++VDLH GQIQGFF PRVPVD+L    V  +YF                        + H  +N +          +++P  G V RA+ FRE L    G   +V +A++ K R  AN      LVG+V+G  CIIVDD++DT  TL      L   GA ++Y FA+H  F+    +R+Q  +NL+ VVV NT PL  S          + KI QL +APLIA+AI NIHD  SVS
Sbjct:   61 INGLKIFSGNANTTLAENVAKLVGVELGKITVDRFVDGEVDVMVHENVRGKDVYIVQPTCVPVNEHLMELLLMVSTMRRSSARRITAIIPYYGYARQDRKMA-ARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGLVGVSYF------------------------ANHELVNPV----------IVSPDAGGVARAKKFREWLVGKYGVQ-NVGLAMIIKQRVRANEIDKMDLVGNVEGSDCIIVDDMIDTAGTLCKAAQHLNDHGARNVYAFASHGLFNGAASERIQK-SNLKEVVVVNTTPLPESCKD-------NEKITQLDIAPLIAKAIQNIHDKKSVS 377          
BLAST of NO01G05860 vs. NCBI_GenBank
Match: CCA22126.1 (ribosephosphate pyrophosphokinase putative [Albugo laibachii Nc14] >CCA23383.1 ribosephosphate pyrophosphokinase putative [Albugo laibachii Nc14])

HSP 1 Score: 254.6 bits (649), Expect = 7.100e-64
Identity = 154/361 (42.66%), Postives = 215/361 (59.56%), Query Frame = 0
Query:  176 IPNLVVFSGSSHPMLAEEVCDYLDIPVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPT--NSNDNVIELLLSISTMQRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVSVDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTSSADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPHVSVDMALVSKFR-DANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDLLKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRAIEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVS 534
            I  L +FSG+++  LAE V   + + +GK  V RF DGEV + + + +RG+D +I+ PT    N++++ELLL +STM+R+SA+RITA+IPY+GYARQD++    R PI+AAD+AR+LE +GVDRV++VDLH GQIQGFF PRVPVD+L    V  +YF                        + H  +N +          +++P  G V RA+ FRE L    G   +V +A++ K R  AN      LVG+V+G  CIIVDD++DT  TL      L   GA ++Y FA+H  F+    +++Q  +NL+ VVV NT PL  S          + KI QL +APLIA+AI NIHD  SVS
Sbjct:   98 INGLKIFSGNANTTLAENVAKLVGVELGKITVDRFVDGEVDVMVHENVRGKDVYIVQPTCVPVNEHLMELLLMVSTMRRSSARRITAIIPYYGYARQDRKMA-ARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGLVGVSYF------------------------ANHELVNPV----------IVSPDAGGVARAKKFREWLVGKYGVQ-NVGLAMIIKQRVRANEIDKMDLVGNVEGSDCIIVDDMIDTAGTLCKAAQHLNDHGARNVYAFASHGLFNGTASEKIQK-SNLKEVVVVNTTPLPESCKD-------NEKITQLDIAPLIAQAIQNIHDKKSVS 414          
The following BLAST results are available for this feature:
BLAST of NO01G05860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22811.11.500e-20274.85ribose-phosphate pyrophosphokinase [Nannochloropsi... [more]
XP_005854471.11.400e-14462.87ribose-phosphate pyrophosphokinase [Nannochloropsi... [more]
GAX29611.11.400e-6742.27hypothetical protein FisN_2Hh170 [Fistulifera sola... [more]
GAX24899.12.300e-6741.99hypothetical protein FisN_2Lh170 [Fistulifera sola... [more]
XP_008862911.11.400e-6442.43hypothetical protein H310_01557 [Aphanomyces invad... [more]
EWM29707.11.400e-6443.85phosphoribosylpyrophosphate synthetase [Nannochlor... [more]
XP_009821076.12.400e-6442.43hypothetical protein H257_00203 [Aphanomyces astac... [more]
CEO99721.14.100e-6441.27hypothetical protein PBRA_007454 [Plasmodiophora b... [more]
CCI48823.15.400e-6442.94unnamed protein product [Albugo candida][more]
CCA22126.17.100e-6442.66ribosephosphate pyrophosphokinase putative [Albugo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL001nonsL001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR008ncniR008Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006442NSK006442Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05860.1NO01G05860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|614860gene_11734Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100250g4gene7636Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05860.1NO01G05860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05860 ID=NO01G05860|Name=NO01G05860|organism=Nannochloropsis oceanica|type=gene|length=4714bp
AGGACGGAGAAGGACAGGACTCACCCAGATAGTGTGCAGCGAGATGGCCT
CAAGCCGCCTACTGGCCGCCGCTGGTGGAGGTAGGCAGGGCGGAGTTGCC
GCTGCCTCTCTCCTGATGCGGGGTGTTTGGCGGCCCTCCTCTAATGTGCC
AGTGGTACGGCACTTGTCCTCCGGCCTTAAAAATTCAGGCACGGCTAACC
CAATATGTGGACTTAAAGCAGCAGCAGTAACAGCAGGGCAAAAGgtgcgt
ggtctcggccaggggggcgatggtagggaggctgggaggaagaaggcaca
tggcatagaaagtatccaccttcgtcttcttgaccttacccgcacatacg
tacctcttgctcgttactcgtacacacacccagAACGGACAGCAAGGATG
GACAAGAAGGCGGCTATGGCGTGGAGAAGGGATTGAGGCGGGTGCAGAGG
AGCTGGCCCGGTGGAACGCAAAAGGGCGGTGGATGCTGGGTGGTGGACTC
ACCCTCCTGGGCGCGCTCCTCCTTGGGAGCGCCGGCAGCAACCATACGGG
CATGGAAGAGGCAGACGAGCACGAGgtaggcgcttgaatgcaatagcgac
tctatgtagcaaagggtatctcgcagtcatagctcgcgggtagggtgggc
gaagatgagaaggatgatttgcccgggtttaaggccggcaaggaacgatg
tttatgtgcctgtgagattatcgacctgatgaacatttcatcgctataat
gtattgtacctacaaggattttagcttgcctcatccacaactcatctctc
tttcttcctttttgacctgctcccgcctccctcttcctcgccagGTGGAG
GAGGAGGTATATGCGAACGAGATAGCAGACCGCATGGCAAGGCGCTCCAA
TGAGAAATTTGAGGAGTTGAAGGCCAGGTGGAGATGGTCAGCAGgtaagg
caagagggaggagtgataaaaggttggatgaatggtcgttactaacctcc
ttccttggactcacccgcgctccccccttccttccctctctccttctctc
cctcctaccctccctcccttctttcttcggtcttacagCAGCCCACCAGC
CCGTCGAGGACCCCCGCACTATCCCAAACCTCGTCGTCTTCTCTGGCTCT
TCCCATCCCATGCTCGCCGAGGAGGTCTGTGACTACCTCGACATCCCTGT
CGGCAAGAGCGTTGTCAAGCGgtacgcctccctccctccctccctccctc
ccttcttcccttctttattttcgtctcacaacacacatacagctgtttct
gatctttttcttccatccctccttttctcctgtctccccccccctcctcc
tagTTTTGCGGACGGCGAGGTGTTCATCCGCATCCTCCAAGAAATCCGGG
GTCGAGACTGCTTCATCATCATCCCCACCAACTCCAACGACAAgtcagtc
cctccctccctccctccctccctccttttttccctctctttcagcctttc
gtccttcactacgcccagctccaccctctttaggagtcaaaactcagcca
ctcttccctccctccctccgcccctccctccctccctccctcgttctctc
tctccgtctctccttctctttccgcagCGTCATAGAGCTCCTGCTGTCCA
TCTCAACTATGCAGCGAGCCTCCGCCAAACGCATCACCGCCGTCATTCCT
TACTTCGGCTACGCCCGACAGgtgctactattccctccctccagccttcc
ctccctccctccttcgctttccctctctccctctctctccttgtctctgt
tcaataaatatcaatacatatatatatatatcaatatatataaatatcaa
tatatataataacatcgatatataatttaaacatcaatatacatatatca
gGACCAACGCACTCCCTTCCGCCGCGAGCCCATCGCCGCCGCCGACATCG
CCCGCATGCTCGAGgtgcgtgccttccctccctcccttcctccctccctc
cgcatagttacccccctcctccctctcacccctccctctccccgtgcttc
tcctctcaacagGAGGTGGGTGTGGATCGCGTGGTTTCGGTCGATCTTCA
CTCGGGGCAAATCCAGgtgagaggagaagcgccagccacggagggagagg
gacgagtgaggggataggaagaggaaggaaggaggagaaggaggagggag
gagcgaatgcaggggcgggaacaagggcgagggagggagaaggggaggtt
agaggcagacatcccaggccgagacttgatttcaccgaccgacatcgtct
tccctccctccctccctccctccctctcctcctcgttttcctcccagGGC
TTCTTCTCCCCGCGAGTGCCCGTGGACCATCTGACACCCGCCGCCGTGGC
CGCCGCTTACTTCGTGGATAATGTCCCTGCCTTCAACCGCCACGCCCGTC
ACgtgagtcctcccattcaggctcgcgcgccctgctcacgtgaggggggg
aaggatgtcctcttccctccttcccttccttccttcctccttccctccct
ccatgtcactcatcccccctccctccctccctccctccctccctccattc
cttcctccctcccttcttcccgacagCCCGAGGTGCCAACTTCGTCCGCT
GATGGCAGCAGCCGCCACAACACCCTCAACCGGCTGGCCACCCTCGgtac
gggaatagggacacgctggcgagggagggcgggagggagggagggaggga
gggagggagggcaggcatagaacatcaccttgaccttcccccctccctcc
cctcctccctccccctctctctcccccctcagGCCCGCAGCCGCTCGTGA
CGGTGATTGCCCCTCACGAGGGCCAGGTCCGACGAGCCCGCATCTTCCGC
GAGCGTCTCTCCAAGCTCCTGGGGCCGCATGTCTCCGTCGACATGgtcag
tgagcctccctccttccctccctccccccctcctaccctccatctcctca
atcctctttcttttccttcgcgcctttttccagGCCCTGGTCTCCAAGTT
CCGCGACGCCAACGGCCACGTCCTCCGACAGCTGGTGGGGGATGTCCAGG
Ggtgcgtacctccctccctccctacctacctacctccctccctcgtctct
tcctcatttctccttcttcctcttctagccgcttaccttgctccgcatgc
gacccccttttatgccctccctccctccctccctccctccctccttcccc
cccccaagGCGCACTTGCATCATCGTGGATGACCTTCTAGACACGGGCAA
GACGCTCGCCACCACCGTGGACCTACTTAAGGGCGAGGGGGCTGACTCCA
TCTACGGCTTTGCCACACACGCGCGgtacgtcccgtgctcggtgtgccct
cctcccctccctccctctctcccttgtcccggcgtctctgtgtgccccca
ccctcctctcgaacgcttgaatgtggacctgcgagtgactgctcgactgt
tccaacatccgagtcgtccatctcgcctccctccctccctccctccctcc
ctccttcagCTTCTCCAAGGACGGACAACAGCGGGTGCAGGATTGCGCAA
ATTTAGAGTTTGTGGTGGTCACCAACACCATGCCGCTGGAAGGCAGCAAG
AGCAGgttgggagggaggaagggaaggagggagggagggagggagggata
ggaaagggaggacaatgcatgcaagttggttttttccgtttgcgctcctc
ttcgtcctgcctcgatctgcaagcatttggaccatacaacgtttctcacc
ttccctccctccctcactccctccctcactcctcccctccctcagGGCCA
TTGAGATCCATCCAGTGCACAACAAGATCCACCAGCTGTCTGTGGCGCCC
CTCATAGCCGAGGCCATCCTCAACATTCACGACTGCGGCAGTGTGTCCAG
CGTGGTGGCAGgtggggaaggagggaaggagggagggagggagggaggga
gggggcgaagagtaggtagatggctccggtgttgacaacctcttctgctg
acgctcgcactgacaatccaacgcagGAGATCAAGAGCGGGAGAGTGTGC
TTGAAAAATCGTCATCCAATAGCGACGCATAGTGGAAAGGGAGGGAGCGG
GAGGCCGGGGGGGAGAGGGGAGAAAGAGGATTAGGTGCTGGAGTTTGTGC
AAGGGACAAAGGACGGGCAGCTAAATGGGAGGAGGGGAAGGGGAGGAAGG
AGGGCAGATGAGATAGGAAGAAAAGTGATGTGACTTTAATGATGATGAGA
TGATGATTAGAAGAGGGGAAGATGAAAGCAGAGGCGGTGTTTGTGGTCGG
CGTGTGTTGCGTGGGGATGGGAAAGCGAATGGGAGAGATCCACTGCTTTT
TGGTAGCCAGTCAGGAAGAAGGAGAAAGAAAAAGGGTTGAAAAGAAGGAG
AATGAGAAAGAAAGATGTGAAAAGAAAATGAGAGGAACGAACAAAGGAAG
AAAGAGAAGATTAATCATGCTCAAGAAAAAATGGTCGTCATGGCTGTCGT
CTCCTTCTTCTTCTCCTTCTTCTTCTTCTGCCTCTTCTTCTTTTGCCTTT
TATTCTTTTCTTTCTTTCGTGGTCATCATCTTCTTCTTCTTCTTCTTCTT
CTCCTCCTTTTGCCTCTTCTTCTTTTGCCTCTTCTTCTTCCTCTCTTTCT
TTTCTTTCTTTCGT
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protein sequence of NO01G05860.1

>NO01G05860.1-protein ID=NO01G05860.1-protein|Name=NO01G05860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=556bp
MASSRLLAAAGGGRQGGVAAASLLMRGVWRPSSNVPVVRHLSSGLKNSGT
ANPICGLKAAAVTAGQKNGQQGWTRRRLWRGEGIEAGAEELARWNAKGRW
MLGGGLTLLGALLLGSAGSNHTGMEEADEHEVEEEVYANEIADRMARRSN
EKFEELKARWRWSAAAHQPVEDPRTIPNLVVFSGSSHPMLAEEVCDYLDI
PVGKSVVKRFADGEVFIRILQEIRGRDCFIIIPTNSNDNVIELLLSISTM
QRASAKRITAVIPYFGYARQDQRTPFRREPIAAADIARMLEEVGVDRVVS
VDLHSGQIQGFFSPRVPVDHLTPAAVAAAYFVDNVPAFNRHARHPEVPTS
SADGSSRHNTLNRLATLGPQPLVTVIAPHEGQVRRARIFRERLSKLLGPH
VSVDMALVSKFRDANGHVLRQLVGDVQGRTCIIVDDLLDTGKTLATTVDL
LKGEGADSIYGFATHARFSKDGQQRVQDCANLEFVVVTNTMPLEGSKSRA
IEIHPVHNKIHQLSVAPLIAEAILNIHDCGSVSSVVAGDQERESVLEKSS
SNSDA*
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Synonyms
Publications