NO01G05500, NO01G05500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_080057484.1 (nuclear transport factor 2 family protein [Spirosoma aerolatum]) HSP 1 Score: 101.3 bits (251), Expect = 2.800e-18 Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 0 Query: 9 AIAELLHKSQIEDLLSKQFLYVDGRWWDLLRTEIFA-TGLITMDNGDG--PLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSL 153 ++AEL K I +L+++ F+Y D R W LR EIF T + M++ G P T+ I WQ +DAV HQ GHY+IT L+ + A Y ATHY+ +A G TR F G+Y+ + GWRI L + L + DGN SL Sbjct: 7 SLAELQDKLAITELVNRLFMYTDDRNWQGLRNEIFTETVYLDMESNGGAPPGIVTAQSITDGWQTGFQGIDAVHHQGGHYLIT-LHGDQADVYGYAVATHYRTAAIHGKTRTFVGSYDIKAERTPN-GWRINQLTYNLKYADGNASL 151
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_009280894.1 (hypothetical protein [Fibrisoma limi] >CCH52310.1 hypothetical protein BN8_01300 [Fibrisoma limi BUZ 3]) HSP 1 Score: 95.5 bits (236), Expect = 1.500e-16 Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 0 Query: 16 KSQIEDLLSKQFLYVDGRWWDLLRTEIFATGLI----TMDNGDGPLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSLT 154 + QI +++++ F+Y D + W ++ E+FA L ++ G + TS + WQQ +DA+ H G+Y++ I N N A Y TATHYK +A G TR F G+Y+ +LV E GWRI + L + GNL LT Sbjct: 7 REQIVEVVNRLFVYTDYQEWQKIQDEVFADNLFFDMSSLGGESGQM--TSKAVCDTWQQGFVGIDAINHLAGNYLVQI-NGNEADVFAYATATHYKKAANAGKTREFVGSYDLHLV-QTEKGWRIDRFTYNLKYASGNLDLT 144
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_014678663.1 (hypothetical protein [Solitalea canadensis] >AFD05435.1 hypothetical protein Solca_0291 [Solitalea canadensis DSM 3403]) HSP 1 Score: 94.7 bits (234), Expect = 2.600e-16 Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 0 Query: 13 LLHKSQIEDLLSKQFLYVDGRWWDLLRTEIFATGLITMD---NGDGPLC-TTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNL 151 + + Q+ +L +K F+Y D + W L+ E+F G I +D G G T D + S W +DAV HQ G++++T LNNN A Y A+HYKA+AT+G TR F G+Y GWRI K+ L +++GN+ Sbjct: 1 MTEREQLIELSNKLFIYTDYKEWQKLKEEVFVEGDIFIDMTSTGAGTAAKMTVDMVCSLWNVGFEGIDAVHHQSGNFLVT-LNNNEAAIYCYAIASHYKAAATEGKTREFVGSYNIGCE-KTAAGWRINSFKYNLKYINGNI 140
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_103787802.1 (hypothetical protein [Solitalea sp. HR-AV] >POY38545.1 hypothetical protein C3K47_03880 [Solitalea sp. HR-AV]) HSP 1 Score: 94.7 bits (234), Expect = 2.600e-16 Identity = 51/143 (35.66%), Postives = 85/143 (59.44%), Query Frame = 0 Query: 13 LLHKSQIEDLLSKQFLYVDGRWWDLLRTEIFATGL-ITMDN-GDG-PLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSL 153 + + Q+ +L +K F+Y D R W+ L+ E+F + I M + G G P + E+ W++ +DA+ HQ G+++++ +NN A Y A+H+K SAT+G TR F G+Y V S + GWR++ K+ L +++GNLSL Sbjct: 1 MTEREQLIELANKLFIYTDYRQWEKLKNEVFTQNVRIDMSSLGAGEPKELPAIELCQLWEKGFEGIDAIHHQSGNFLVSTINNT-AEIYCYAIASHFKESATEGKTREFVGSYNLEAVKS-DKGWRLRSFKYNLKYINGNLSL 141
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_071890972.1 (hypothetical protein [Flavisolibacter tropicus]) HSP 1 Score: 94.0 bits (232), Expect = 4.400e-16 Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 0 Query: 16 KSQIEDLLSKQFLYVDGRWWDLLRTEIFATGLI--TMDNGDGPLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSL 153 + QI ++++K F+Y D + W+ L+ E+F ++ G + TT+ I W++ +DAV H G+Y+I I + +A Y TATHYK +ATQG TR F G Y +L + GWRI K+ L + GNL L Sbjct: 7 REQIVEVVNKLFVYTDAQEWEKLQQEVFTEQVLFDMSSMGGKEMVTTAANICQIWKEGFTGVDAVNHLAGNYLINI-KDEIADVFAYATATHYKQAATQGKTREFVGTYNLHLT-RHGDGWRIDQFKYNLKYATGNLDL 143
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_033089453.1 (nuclear transport factor 2 family protein [Nocardia seriolae] >GAM48855.1 hypothetical protein NS07_v2contig00089-0009 [Nocardia seriolae] >GAP30803.1 hypothetical protein NSK11_contig00094-0033 [Nocardia seriolae] >APA99296.1 hypothetical protein NS506_05250 [Nocardia seriolae] >OJF80997.1 hypothetical protein NS14008_19590 [Nocardia seriolae] >BAW06780.1 conserved hypothetical protein [Nocardia seriolae] >PSK28898.1 nuclear transport factor 2 family protein [Nocardia seriolae]) HSP 1 Score: 87.4 bits (215), Expect = 4.100e-14 Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 0 Query: 10 IAELLHKSQIEDLLSKQFLYVDGRWWDLLRTEIFATGLITMDNGDGPL-CTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNN-MAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSLT 154 +A L + I D +++ F+Y D W LR +FAT + GP+ +IV W+ LGSLDAV HQ G+++I I + +AHA + A H K SA G TR F G+Y L + E GWRI ++ L +DGN LT Sbjct: 4 LAALADRLDISDTITRLFVYCDQARWADLRESVFATEVFFDSGFGGPVGSRPGSDIVDDWETGLGSLDAVHHQAGNHLIEITGDTALAHADS--IAVHVKNSAQHGTTRWFIGSYVLGLART-EKGWRIDRFEYKLKAIDGNADLT 146
BLAST of NO01G05500 vs. NCBI_GenBank
Match: OJW98147.1 (hypothetical protein BGO70_11815 [Bacteroidetes bacterium 43-93]) HSP 1 Score: 87.4 bits (215), Expect = 4.100e-14 Identity = 49/142 (34.51%), Postives = 71/142 (50.00%), Query Frame = 0 Query: 14 LHKSQIEDLLSKQFLYVDGRWWDLLRTEIFATGL---ITMDNGDGPLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSL 153 + K + +L +K F+Y D + W L E+F L ++ G + E+ W + LD V HQ GHY+I + A Y A HYK SA G TRVF G+Y+ N + + GWR+ K+ L F+DGN +L Sbjct: 1 MEKFHLTELANKLFMYTDAQRWQDLLDEVFVEELWFDMSSAGGGELRKLKAVELCDMWAEGFKGLDEVHHQAGHYLIDV-RKEEASIFAYAVAYHYKNSAANGKTRVFVGSYDLNAI-NTSKGWRLNQFKYNLKFIDGNTNL 140
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_067822228.1 (nuclear transport factor 2 family protein [Nocardia inohanensis]) HSP 1 Score: 87.0 bits (214), Expect = 5.400e-14 Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = 0 Query: 10 IAELLHKSQIEDLLSKQFLYVD-GRWWDLLRTEIFATGLITMDNGDGPLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNN-MAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSLT 154 IA L + ++ DL++K F+Y D RW DL + + G P +IV W + LGSLDAV HQ G+++I I + +AHA A H K ATQG TR F G+Y + E GWRI ++ L +DGN LT Sbjct: 4 IAALAERLELGDLITKLFVYCDQARWSDLAESVLAEQVYFDSGFGGEPGPRAGSDIVDDWAEGLGSLDAVHHQAGNHLIEITGDTALAHA--DAIAVHLKNDATQGKTRWFVGSYVLGFERT-EKGWRINRFEYKLKLIDGNADLT 146
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_067710129.1 (nuclear transport factor 2 family protein [Nocardia yamanashiensis]) HSP 1 Score: 85.5 bits (210), Expect = 1.600e-13 Identity = 59/147 (40.14%), Postives = 77/147 (52.38%), Query Frame = 0 Query: 10 IAELLHKSQIEDLLSKQFLYVD-GRWWDLLRTEIFATGLITMDNG-DGPLCTTSD-EIVSRWQQTLGSLDAVLHQVGHYVITILNNNMAHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNLSLT 154 IA L + I DL++K F+Y D RW DL E + DNG GP+ T +I + W + LG+LDAV HQ G+++I I A A A H K ATQG TR F G+Y + E GWRI ++ L +DGN LT Sbjct: 4 IAALADRLDIGDLITKLFVYCDQARWGDL--AESVLAEQVYFDNGFGGPVGTRPGIDITNDWAEGLGALDAVHHQAGNHLIEI-TGGTAQAHADAIAVHLKNDATQGKTRWFVGSYALGFQRT-EKGWRIDRFEYQLKLIDGNADLT 146
BLAST of NO01G05500 vs. NCBI_GenBank
Match: WP_079687221.1 (nuclear transport factor 2 family protein [Ohtaekwangia koreensis] >SKC71597.1 SnoaL-like domain-containing protein [Ohtaekwangia koreensis]) HSP 1 Score: 84.0 bits (206), Expect = 4.600e-13 Identity = 43/140 (30.71%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 16 KSQIEDLLSKQFLYVDGRWWDLLRTEIFATG----LITMDNGDGPLCTTSDEIVSRWQQTLGSLDAVLHQVGHYVITILNNNM-AHAVTYGTATHYKASATQGHTRVFAGNYEFNLVFSYELGWRIKGLKFTLMFMDGNL 151 + ++ +L +K F+Y D +WWD L E+ + ++ G G ++ EI W+ +DAV HQ G++++ + + A + Y A HYK +ATQG+TR F G+Y+ + V + + GWRI + + + +GN+ Sbjct: 7 RDEVIELATKLFIYTDYQWWDKLLEEVLTENVWFDMSSLGAGAGK-NLSAKEICDMWKAGFAGIDAVHHQAGNFLVDFKSEAIEAKVLCYAIALHYKKAATQGNTREFVGSYDLHCVLT-DKGWRIDSFTYNIKYSNGNV 144 The following BLAST results are available for this feature:
BLAST of NO01G05500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05500 ID=NO01G05500|Name=NO01G05500|organism=Nannochloropsis oceanica|type=gene|length=1753bpback to top protein sequence of NO01G05500.1 >NO01G05500.1-protein ID=NO01G05500.1-protein|Name=NO01G05500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=154bpback to top Synonyms
Publications
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