NO01G05420, NO01G05420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05420 vs. NCBI_GenBank
Match: XP_005854949.1 (hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526] >EKU21412.1 hypothetical protein NGA_0359401 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 256.1 bits (653), Expect = 1.000e-64 Identity = 115/205 (56.10%), Postives = 154/205 (75.12%), Query Frame = 0 Query: 29 LTEKIEAXXXXXXXXQRRFWLEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDM-TDVAALRDPINQCISGTAAENMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLKDINIQENDFVVLKMDVEGIEFSLLERMMADDTYKLIDEV 233 L E+++ +RRFWL+PLEP++QYR K++LGKT DV+DKDQVTP+ L NF++ASDK +Y RRIYIDLG+ DF SS+CWMMQNYP KFD ++GFE + D+ L I +C+ GT+AE GY T ++T Y+NF+G +D++++SP TRGLSQF++DI I+ENDFVVLKMDVEG E+ +L R+M D TYK +DEV Sbjct: 53 LKEEVQKLKAKVEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADAKLHADIHTLASNITECVKGTSAEARGYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRIMDDGTYKFLDEV 257
BLAST of NO01G05420 vs. NCBI_GenBank
Match: EWM20773.1 (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 255.8 bits (652), Expect = 1.400e-64 Identity = 116/209 (55.50%), Postives = 156/209 (74.64%), Query Frame = 0 Query: 25 SIPKLTEKIEAXXXXXXXXQRRFWLEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDM-TDVAALRDPINQCISGTAAENMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLKDINIQENDFVVLKMDVEGIEFSLLERMMADDTYKLIDEV 233 +I L E+++ +RRFWL+PLEP++QYR K++LGKT DV+DKDQVTP+ L NF++ASDK +Y RRIYIDLG+ DF SS+CWMMQNYP KFD ++GFE + D+ L I +C+ GT+AE GY T ++T Y+NF+G +D++++SP TRGLSQF++DI I+ENDFVVLKMDVEG E+ +L R+M D TYK +DEV Sbjct: 57 TIRDLKEEVQKLKAKVEIHERRFWLDPLEPIFQYRPKFWLGKTDDVDDKDQVTPYFLANFVNASDKNVYDRRIYIDLGLHDFKSSVCWMMQNYPTKFDLVYGFEADGALHADIHTLASNITECVKGTSAEARGYKTHEVLNTFTFYYNFVGAEDNNKSSPPTRGLSQFVRDIGIKENDFVVLKMDVEGWEYDILSRVMDDGTYKFLDEV 265
BLAST of NO01G05420 vs. NCBI_GenBank
Match: XP_005853913.1 (hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526] >EKU22448.1 hypothetical protein NGA_0460801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 246.5 bits (628), Expect = 8.200e-62 Identity = 111/185 (60.00%), Postives = 144/185 (77.84%), Query Frame = 0 Query: 22 SSDSIPKLTEKIEAXXXXXXXXQRRFWLEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDMTDVAALRDPINQCISGTAAE-NMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLKDINIQENDFVVL 206 S S L E+++A Q+RFW EPLEP+WQYRGKYYLGKT D+EDKDQVTPF L NF++ASD +Y+R+IYIDLGIKDF SSLCW+MQNYPVKFDA+HGFEC +D+++VAAL I+ C+ GTAA+ GYT EG + L +Y+N+IG D++ T P TRGLSQ +KD+NI+++D+VV+ Sbjct: 52 SVKSSQSLYERMQAVEENMKVLQKRFWQEPLEPIWQYRGKYYLGKTNDIEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRGTAADLKQGYTPEGVKEILHIYYNYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVVV 236
BLAST of NO01G05420 vs. NCBI_GenBank
Match: EWM22800.1 (hypothetical protein Naga_100178g4 [Nannochloropsis gaditana]) HSP 1 Score: 238.0 bits (606), Expect = 2.900e-59 Identity = 105/162 (64.81%), Postives = 134/162 (82.72%), Query Frame = 0 Query: 44 QRRFWLEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDMTDVAALRDPINQCISGTAAE-NMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLKDINIQENDFVV 205 Q+RFW EPLEP+WQYRGKYYLGKT DVEDKDQVTPF L NF++ASD +Y+R+IYIDLGIKDF SSLCW+MQNYPVKFDA+HGFEC +D+++VAAL I+ C+ +AA+ GYT EG D L +Y+++IG D++ T P TRGLSQ +KD+NI+++D+VV Sbjct: 5 QKRFWQEPLEPIWQYRGKYYLGKTNDVEDKDQVTPFFLANFVNASDPAVYKRKIYIDLGIKDFYSSLCWIMQNYPVKFDAIHGFECASDLSNVAALSSQIDACVRESAADLKQGYTPEGVKDILHIYYDYIGTDENPATQPPTRGLSQVMKDLNIEKDDYVV 166
BLAST of NO01G05420 vs. NCBI_GenBank
Match: GAQ87076.1 (hypothetical protein KFL_003290130 [Klebsormidium nitens]) HSP 1 Score: 99.4 bits (246), Expect = 1.600e-17 Identity = 62/192 (32.29%), Postives = 98/192 (51.04%), Query Frame = 0 Query: 49 LEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHT----DMTDVAALRDPINQCISGTAAENMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLS--QFLK-DINIQENDFVVLKMDVEGIEFSLLERMMAD-DTYKLIDEV 233 +E L P Q+R +Y G+ DVE + P+LLGN +D + RRR+++DLG F +S W M+ YPV+FD +H FE T + +A L +P N + Y +G+ D ++ G+ +F+K D+ I+E D +LKMD+EG E+ +L ++ D + LIDE+ Sbjct: 133 IEELLPKLQFRPEYSYGQIHDVEGLGHIVPWLLGNQVDLNSA---RRRVFMDLGANRFETSTAWFMRTYPVEFDEIHAFEMTTVFIPPIEKLARLPNPPN---------------------ITAYRALVGIRDLPPSASGVPGIDILRFIKNDLRIKEEDTFILKMDIEGAEWDVLPLLLRDSEALALIDEL 300
BLAST of NO01G05420 vs. NCBI_GenBank
Match: GAQ79019.1 (hypothetical protein KFL_000220530 [Klebsormidium nitens]) HSP 1 Score: 98.2 bits (243), Expect = 3.600e-17 Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 52 LEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDMTD-----VAALRDPINQCISGTAAENMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLS--QFLK-DINIQENDFVVLKMDVEGIEFSLLERMM-ADDTYKLIDEV 233 L P Q+R Y G+T D ED + P+LLGN +D + + RR+++DLG FNSS W M+NYPV FD +H FE D+ + + AL P + Y +G+ D++ TS G+ +F+ ++ I+E D +++KMD+EG E+ +L ++ A +LIDE+ Sbjct: 116 LHPELQFRPGYAHGQTDDCEDPSYLIPWLLGNQVDLNSAS---RRVFLDLGAAAFNSSTGWFMRNYPVDFDEIHAFEVVPDLFEPPYDVIGALPHP---------------------PVVTQYEMMVGVSDEANTSLGVPGVDILRFITGELRIREEDTLIVKMDIEGGEWEVLPALLEAPAVLRLIDEL 281
BLAST of NO01G05420 vs. NCBI_GenBank
Match: XP_024367822.1 (uncharacterized protein LOC112278488 [Physcomitrella patens] >PNR26386.1 hypothetical protein PHYPA_030961 [Physcomitrella patens]) HSP 1 Score: 95.1 bits (235), Expect = 3.100e-16 Identity = 58/191 (30.37%), Postives = 99/191 (51.83%), Query Frame = 0 Query: 49 LEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDMTDV--AALRDPINQCISGTAAENMGYTTEGT----MDTLIVYHNFIGLDDDSETSPQTRGLSQFLKDINIQENDFVVLKMDVEGIEFSLLERMMAD-DTYKLIDEV 233 +E L+P +R + L T DVEDK + P+L G +D + + RR+Y+DLG F +S+ W Q YP F +H FE + + + + N + A + T G +D + Y+ F+ DD +++ TR + + D+ + +D VV+KMD+EG E+ +L+R + D + +IDE+ Sbjct: 110 IEALDPRNNFRRGFSLKFTSDVEDKTAILPWLYGAKVDLNKRA---RRVYLDLGANSFRTSVTWFSQMYPCDFTEIHAFEVSPQLFKIPSSGFNEETNWVPENSHATRV-KTAPGVPNWMLDRIKTYNTFVSDGDDEKSTNITRFIKE---DLQLTADDAVVVKMDIEGAEWPILKRWLLDLEMANIIDEL 293
BLAST of NO01G05420 vs. NCBI_GenBank
Match: ABK20978.1 (unknown [Picea sitchensis]) HSP 1 Score: 94.7 bits (234), Expect = 4.000e-16 Identity = 56/191 (29.32%), Postives = 102/191 (53.40%), Query Frame = 0 Query: 49 LEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDMTDVAALR-DPINQCISGTAAENMGYTT----EGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLK-DINIQENDFVVLKMDVEGIEFSLLERMMAD-DTYKLIDEV 233 ++ L+ +R + LG T DVED+ + P++L + ID + + RR++ID+G FN+S+ W M+ YP F +H FE + + + D + G M T + +D + +YH +G D+ + + +++F+K ++ ++ D VV+K+D+EG E+ L R + D D K+IDE+ Sbjct: 105 IDKLDDWRNFRRGFTLGFTPDVEDRTHILPWILASKIDLNQR---ERRVFIDVGANYFNTSVTWFMRMYPCDFTEIHAFESNAQLLQKPSRGFDEEANSVEGNPWSYMTKVTPEAPQWMLDRINIYHKMVG--DEDDIANNAINITRFIKEELQLKPTDTVVVKIDIEGGEWPTLRRWINDPDMPKIIDEL 290
BLAST of NO01G05420 vs. NCBI_GenBank
Match: XP_024359293.1 (uncharacterized protein LOC112274233 [Physcomitrella patens] >PNR59386.1 hypothetical protein PHYPA_002177 [Physcomitrella patens]) HSP 1 Score: 94.7 bits (234), Expect = 4.000e-16 Identity = 60/191 (31.41%), Postives = 104/191 (54.45%), Query Frame = 0 Query: 49 LEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDM-----TDVAALRDPINQCISGTAAENMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLKD-INIQENDFVVLKMDVEGIEFSLLERMMAD-DTYKLIDEV 233 +E L+ V+ +R Y L DVEDK + P+LLGN +D + L RRR+ +DLG F++S+ W + YP F +H FE ++ D P S N + +D + +Y+ F+ DD T+ +++F+ + ++++ D VV+KMD+EG E+S+L+R MA+ + +++DE+ Sbjct: 170 IEALDDVYNFRRGYALKYVADVEDKTHILPWLLGNRVDLN---LPRRRVLMDLGGNRFDTSVTWFNRMYPCDFTEVHVFEIDRNLFKFPKEDHEEFNGPFQNSAS-IMVRNAPPIPKWMIDRMKLYNVFVSDGDDPSTN--ALNITRFMTETLDLKAADTVVVKMDIEGSEWSILKRWMANPEIPRIVDEL 354
BLAST of NO01G05420 vs. NCBI_GenBank
Match: OAE21832.1 (hypothetical protein AXG93_138s1030 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 92.4 bits (228), Expect = 2.000e-15 Identity = 56/189 (29.63%), Postives = 93/189 (49.21%), Query Frame = 0 Query: 49 LEPLEPVWQYRGKYYLGKTKDVEDKDQVTPFLLGNFIDASDKTLYRRRIYIDLGIKDFNSSLCWMMQNYPVKFDAMHGFECHTDMTDVAALRDPINQCIS----GTAAENMGYTTEGTMDTLIVYHNFIGLDDDSETSPQTRGLSQFLKDINIQENDFVVLKMDVEGIEFSLLERMMAD-DTYKLIDEV 233 +E L+P+ YR LG T D++DK Q+ + LG D +RR++IDLG +F +S W MQ YP F +H FE ++ D I G G+ ++ + Y+ + G+ D+ TR + + LK + D V++KMD+EG E+++L + D + ++IDE+ Sbjct: 233 IERLDPLNNYRRGVALGFTTDLDDKTQIEQWFLGT---KEDLNKAKRRVFIDLGANEFTTSFLWFMQRYPCDFTEIHAFEADPNLFKFPTGWDEEANWIQEPGWGKVKSRAGFVPSWLLERIHYYNKYAGVVDNVSAVNITRFMKEELK---LTPEDTVIVKMDIEGAEWNILYDWVKDPEMPQIIDEL 415 The following BLAST results are available for this feature:
BLAST of NO01G05420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05420 ID=NO01G05420|Name=NO01G05420|organism=Nannochloropsis oceanica|type=gene|length=1088bpback to top protein sequence of NO01G05420.1 >NO01G05420.1-protein ID=NO01G05420.1-protein|Name=NO01G05420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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