NO01G05320, NO01G05320 (gene) Nannochloropsis oceanica

Overview
NameNO01G05320
Unique NameNO01G05320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2951
Alignment locationchr1:1417779..1420729 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1417779..1420729 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G05320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL000nonsL000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR059ngnoR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05320.1NO01G05320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05320.1NO01G05320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05320 ID=NO01G05320|Name=NO01G05320|organism=Nannochloropsis oceanica|type=gene|length=2951bp
GTCCTGTATTTCTGTGTGCTTTCCTAATTTGACGGTCTTCATGACATAAT
TATACTCCACATGCAGGACTAAGGGATGGATGAGGGCTGCGGTATAGCAG
CTCTTGCGGCCGCCGCAACTCTACAGACTCGTGCAGGAGCAGCTCTCAGC
AGCAGTAGTACCAGCAGTACCACCACCCCCAACAAAGCTGCCGTTGCACA
CATCACCATGGATCCTCCTGTCCATGCGCCGTCTTCATTTTCGAGGCTGG
TACAGGCTGCCTGTCGCCTTGTCCCTTCCTCGAAGCCACACGGAACGGAG
AATGGGTGTCCAAATCACCGGGGGGTAGACGGGCCGCAAATCAAGGGAGT
GGTCGATGGGTGCCAAGCCCACCCACAGCATTTATGTCGCCCCATACAGC
AGCCGCAACAGCCTCAGTATCAGCCACAAAAATGGTCGGGTGGCCCTCCT
GCTCATATTTCCCCGTCTCTCTTGCTTCCTTCTTTTACTTTGACTCCCTC
CATGCCCTCCAACTATTCGTCCCTCTGCAGCAAGCACCCCTTCCTGCAAC
ACTATCACCCTGCAGCTTTGGTCCCCTTCGCTTCTTCCTTGGCAGGCTGC
ACCAGCAACCCCTCTTCTTTGCTCCTCTCTCCACCACTGACCGGCTCTGT
CTTGCCTGCCATAAAAGATCAAGACCAAGCCTGGTTCCAGAAACCGTGCA
AGCAGCAGATACAGCATAAGCCACAGCAGCCGAAGCAACCGCAGGACGGG
CAAATGCAGCATTTTCAGATTCAGCAGTACCTGCAGCAAGGACAACGGCA
ACAACATTACTACCATATGCAACAGCAGCAGCAGCAGCAGCAACAGCAGC
AGCAGCAGCAAAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAAC
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAACCAGCGGCAGCA
GCAGCGGCAGCAGCAATTTCCTGCGGCTCCTCTGATATCAACGTGGCGGA
GGCCTTCTTCCGCAGCGGCCTTCCTTCACAAAGCCCACTCTACTAGCACC
AACTCCAACTCAATCTCAACCGTTAGGGCCACCGCGGGTGTTGAGTCCTC
CTCCTCCACCTCTTCCGCTCCTTCCTTCTCCTTTTCTCCCTCCCCCTGCA
CCACCAGCACTGTCTTCAGTAATCACCGACCCTTATTCAAGGAGGTCAAG
GCACATCCCACCATTTCGATCCCCTCCCCCTGTACCACTGCCTCTTTCCC
TTCATCCAACTCTTCGTCAGTCTCGGCCAACAGCGACTGCACCAAAAAAA
GCGCCTGGAGCACGCCTGATTCCTCGCAGCCGCCATCCTTCGTCTTTCCC
TCCTCCTTTTTTTCCTCCTCCTCCTCCTCCTCCTCCTCTATCACCTCCTC
CTCCACCTCAACGCCTCTCCCCACCATCCTCACAACACCTCCTATGTCCT
CCTTCTCCTTCTCAGCCTCCACCTCCTCCTCCTCCTCCGCCGCCGCCGCC
GCCGCCTCCACCAACAACAACAATGCCCTCCCCCCCTTCCTCTCCTTCTC
TCTCAATGCCTCCGATATCCGACCTGGCGAATCTACTTCCCTCGTGGGTC
TCCTCCCCGGCCTCCGTCCCTCCCTCATGGATAAATACCTCACCCCTGCC
CAAACAGGTGCCAAACTTCCACGCGCGCCACGAAATGATCTCTCTACACT
CACGGCGGAGGAAAAAGTGGAGCGACGCAAAGCCCGCGCACGAGAATACA
GTCGGGTAGCACGCCTTCGGAGTGAGGAGTTGGCGGTAGAGCTGACGAGG
GACGTGGAGGCCATGCGCGCCTTTGAGGCGATGGTGGAAGAGAGTCCTGC
CCTTCGGCTTGTCCTCGCTCCCGACCTGAATGCCCTGGTGATGTATGCGA
ACCGGACGGCAGTGCGTCTGCTTAGCAGCATCAGCAACAGCACCAGTGGC
ATCAACAGCAAAATCAGCAGCACCAGCGGCAGCATTGGGAGCAGCTGTAT
GTTGGGAAGGTCTTTTTACAGCTTGATCCATCCTGATGACGCCCTCGTCA
TCTCTCCTTTTCTTCAGCGGCTCATTCTCTCTCGGGACTCCTCTCGAGGG
CCACCTTTGCGATGCCGGCTTTGGAATGGGGGTAGGGAGGAGGGTAGGGA
GGGGGGGAGGGAGGGCGAGGTGGTAGAGACTAAGATGTGGGTGGCATTTG
GACGGCAGGGGTTGGTGTGCTCATTGTGGATAAAGGACGAGGAGAAAGTG
GCGAAGAAAGAAGGGAGGATGAAAGGAGGGGTGGAGGTGAAAGAGAGACA
GGTGCTGAGCGGCAAGGAGGGTGAGGGGGATAAGGGAGTGAGGGAGGAGG
AGAGGGAAGAAGGATGCAAACGGACCAAGAGACGGTAGGAGAGGGAGGGA
GATAGAAAGGATGAGAGGGAAGGAGGTGAATGAGTACACGAAGGAGGCAC
CATACGGATCAATTTGAAGGCATATTGAGAAAAAGAGGATATAGAGCATC
GCGAAAAAGGGGCATACGAGGAGACTGAAGAAGGCGGCAACGAATGATTC
ACGAAAGGAGAACCAACGGCGGTCGAAACGACGGCGGATGAGCTAGTGAG
GGAATGTGAAGGCTGCCGACTTCATATACGTTTGTGCATATGCACGTCCG
AAAACGCATCAAACAATGTCCTTCATGCATATAAACGAGTCTTCATGATC
ACATGACGACCCAGGCGAAACCAAGTCGGTCATATTCTTCATATCCGCGG
ACAGCATTGTGCCAGTAGAAAAAGTAAGAACGCGATTACACGGACAAAGA
TTAGGACTGGAAGTAGGGGAAGGCCGGCATGACGGACATAGAGAAGAAAT
GAAAGTCATGCGCTGCAGGTTTTGATGGGAGGGACGCGCGATGGATGCTA
GGAAGGTAGTCACAGGGGAGGCCAAATCATAGAACAGCCCCCGATAAAAC
G
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protein sequence of NO01G05320.1

>NO01G05320.1-protein ID=NO01G05320.1-protein|Name=NO01G05320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=771bp
MDEGCGIAALAAAATLQTRAGAALSSSSTSSTTTPNKAAVAHITMDPPVH
APSSFSRLVQAACRLVPSSKPHGTENGCPNHRGVDGPQIKGVVDGCQAHP
QHLCRPIQQPQQPQYQPQKWSGGPPAHISPSLLLPSFTLTPSMPSNYSSL
CSKHPFLQHYHPAALVPFASSLAGCTSNPSSLLLSPPLTGSVLPAIKDQD
QAWFQKPCKQQIQHKPQQPKQPQDGQMQHFQIQQYLQQGQRQQHYYHMQQ
QQQQQQQQQQQQKQQQQQQQQQQQNQQQQQQQQQQQQNQRQQQRQQQFPA
APLISTWRRPSSAAAFLHKAHSTSTNSNSISTVRATAGVESSSSTSSAPS
FSFSPSPCTTSTVFSNHRPLFKEVKAHPTISIPSPCTTASFPSSNSSSVS
ANSDCTKKSAWSTPDSSQPPSFVFPSSFFSSSSSSSSSITSSSTSTPLPT
ILTTPPMSSFSFSASTSSSSSAAAAAASTNNNNALPPFLSFSLNASDIRP
GESTSLVGLLPGLRPSLMDKYLTPAQTGAKLPRAPRNDLSTLTAEEKVER
RKARAREYSRVARLRSEELAVELTRDVEAMRAFEAMVEESPALRLVLAPD
LNALVMYANRTAVRLLSSISNSTSGINSKISSTSGSIGSSCMLGRSFYSL
IHPDDALVISPFLQRLILSRDSSRGPPLRCRLWNGGREEGREGGREGEVV
ETKMWVAFGRQGLVCSLWIKDEEKVAKKEGRMKGGVEVKERQVLSGKEGE
GDKGVREEEREEGCKRTKRR*
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Synonyms
Publications