NO01G05200, NO01G05200 (gene) Nannochloropsis oceanica

Overview
NameNO01G05200
Unique NameNO01G05200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3110
Alignment locationchr1:1380548..1383657 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-lactate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1380548..1383657 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR006139D-isomer_2_OHA_DH_cat_dom
IPR006140D-isomer_DH_NAD-bd
Homology
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_073081450.1 (2-hydroxyacid dehydrogenase [Chitinophaga jiangningensis] >SHL79407.1 D-lactate dehydrogenase [Chitinophaga jiangningensis])

HSP 1 Score: 337.8 bits (865), Expect = 4.000e-89
Identity = 177/337 (52.52%), Postives = 235/337 (69.73%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLD-GITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARG 337
            M +  +S+Q YD K+ T ANE    +Y++ L FLE  L+   TA +    +V+CAFVND + + VL +  ++ I LIALR+AG NNVDL   A   + +V VPAYSP AVAEHA+ALLL L+RKI+K YNR+RD NF+L G+  GF L+GKTVGV+GTG IG  F RIMMG GC VL YD+ +N AL+              EY PLD V + SDIISLH PL P+TK LIN  ++ KMK+GV ++NTSRGGL+D+KAV+++LK  HIG + +D YE+EE  F+ +LS +++ DD   RL+TFPNV+IT HQGF+T EALT IAE+T+ +I  + +G
Sbjct:    1 MNILFYSAQPYDIKYFTTANE----KYQYQLRFLEYPLNTDNTALVKPGENVVCAFVNDHLDAPVLHQLYDKGIRLIALRAAGFNNVDLKTAAALNMPVVRVPAYSPHAVAEHAVALLLGLNRKIYKAYNRIRDNNFTLNGL-EGFDLYGKTVGVIGTGNIGAIFCRIMMGFGCKVLAYDMYKNEALE----------NAGVEYVPLDTVFERSDIISLHCPLTPETKHLINAITIAKMKRGVFLLNTSRGGLIDTKAVVEALKNCHIGALAIDVYEQEENLFFHDLSGEIIQDDVWSRLITFPNVVITSHQGFFTHEALTQIAETTLHNIACFEKG 322          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_026950282.1 (2-hydroxyacid dehydrogenase [Algoriphagus mannitolivorans])

HSP 1 Score: 337.0 bits (863), Expect = 6.900e-89
Identity = 174/333 (52.25%), Postives = 231/333 (69.37%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEY 334
            MK+A FS++ YD++    + E    +++H ++FLE RLD  T +LAE H  IC FVND +   +L K  +  I LIALR AG N VDL   +K  +++V VPAYSPEAVAEHA AL+LTLSRK HK YNRVR+ NFSLEG+T G  + GKT+GV+GTG IG  F RI  G GC VL YDV EN  ++ L            EY PL EVL  S+IISLH PL P+TK LIN ++L+ M+ GV +INTSRG L+D+K VI +LK + IG +G+D YE+EE  F++NLS++++ D+++ RLMTFPNV+IT HQ F T EAL  IA +T++++ E+
Sbjct:    1 MKIAFFSTKSYDRE----SFENHVVDFKHEISFLEVRLDLTTLSLAEGHQAICTFVNDTIHEDILRKMSQMGIRLIALRCAGYNQVDLKSASKYGITVVRVPAYSPEAVAEHAFALILTLSRKTHKAYNRVRENNFSLEGLT-GVNIFGKTIGVVGTGAIGRAFCRIAKGFGCKVLAYDVIENEEMKQL----------GVEYLPLPEVLSQSNIISLHCPLTPETKHLINRETLSLMQTGVALINTSRGALIDTKEVIKALKSRKIGFLGIDVYEQEEHIFFQNLSEEILLDEEIARLMTFPNVLITGHQAFLTKEALAQIASTTLRNLQEF 318          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_031494991.1 (2-hydroxyacid dehydrogenase [Bryobacter aggregatus])

HSP 1 Score: 336.7 bits (862), Expect = 9.000e-89
Identity = 172/333 (51.65%), Postives = 231/333 (69.37%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEY 334
            MK+A F +  ++++F    N  +     H +TFLE  L   TA LA  HD +C FVND V + VL    EQ I LIA RSAG N++DL    +  + +V VPAYSP AVAEHA+AL+LTL+RK H+ +NRVRDGNFSL+G+  GF LHGKTVGV+GTGKIG+ F +IM+G GC+VL YD+  N +++ +            +Y+PL +VL+ SDI+SLH PL+  T  LIN DSL +MK G ++INTSRGGLVD+KA+ID+LK  HIG +GLD YEEE + F+ +LS  V+ DD   RL++FPNV+IT HQ F+T EAL  IA +T+ +++E+
Sbjct:    1 MKIAFFGAHQFEREFFDRYNARKG----HEITFLEEHLRPETAVLAAGHDCVCVFVNDTVDATVLGLLAEQGIQLIAARSAGFNHIDLDAAKRLGIPVVRVPAYSPFAVAEHAVALILTLNRKTHRAFNRVRDGNFSLDGLL-GFDLHGKTVGVIGTGKIGQVFAKIMIGFGCEVLAYDIAPNYSVREM----------GVQYQPLGDVLRKSDIVSLHCPLVTATHHLINGDSLARMKPGAMLINTSRGGLVDAKALIDALKSGHIGAVGLDVYEEEADLFFEDLSGQVIEDDVFARLLSFPNVLITGHQAFFTKEALQGIAMTTLDNVSEF 318          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_054280198.1 (2-hydroxyacid dehydrogenase [Chitinophagaceae bacterium PMP191F])

HSP 1 Score: 336.3 bits (861), Expect = 1.200e-88
Identity = 175/336 (52.08%), Postives = 232/336 (69.05%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARG 337
            MKVA FS+Q YD+++    N        H L F +  L+  T  LA     +C FVND++ ++++ K  EQ I LIALR AG NNVDL   A+  +S+V VPAYSP AVAEHA+ L+LTL+RK HK YNRVR+GNFSLE +T GF LHGKTVGV+GTGKIGE F  IM G GC VL +DV  N  L++             EY PL ++L   DIISLH PL  +T+ LIN  +L  MKKG ++INTSRG L+D+ A I++LKK H+G +G+D YE+EE+ F+ NLS++++ DD ++RLM+FPNV+IT HQGF+T EALT IA +T+Q+I+++  G
Sbjct:    1 MKVAFFSTQSYDREYFNRHNGT------HELVFFDVPLNAQTVLLAAGFKAVCVFVNDQLPASIIAKLAEQGIQLIALRCAGYNNVDLNAAAQHHISVVRVPAYSPYAVAEHAVTLILTLNRKTHKAYNRVREGNFSLEKLT-GFDLHGKTVGVIGTGKIGEIFSGIMQGFGCRVLAFDVIANKHLES----------QGIEYLPLVQMLPQCDIISLHCPLNDQTRHLINEHTLRMMKKGSMLINTSRGALIDTPAAIEALKKGHLGYLGIDVYEQEEKLFFYNLSEEIIEDDTIMRLMSFPNVLITAHQGFFTAEALTQIACTTLQNISDFEAG 319          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_064198282.1 (2-hydroxyacid dehydrogenase [Emticicia sp. MM])

HSP 1 Score: 335.5 bits (859), Expect = 2.000e-88
Identity = 176/343 (51.31%), Postives = 233/343 (67.93%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSI 344
            MK+A FS++ YDK+F    N      + H LTF EA L+  +  LAE  D IC FVND+V++ V++K    N+ LIALR AG NNVDL    +  + +V VPAYSP AVAEHA+AL+LTL+RK HK YNRVR+GNFSLE ++ GF L  KTVGV+GTGKIGE F RIM+G GC VL +D+  N  L               +Y  +++VL  SDIISLH PL  KT  LIN  ++ KMK G ++INTSRG L+D++AV+++LK K +G +GLD YE+E   F+ +LS++++ DD L RLMTFPNV+IT HQGF T EALT IA +T+ +I+ +  GT+ G  +
Sbjct:    1 MKIAFFSTKPYDKEFFEKHN------HSHELTFYEASLNEKSVRLAEGSDAICVFVNDKVNATVIEKLAGMNVRLIALRCAGFNNVDLEAARQANIVVVRVPAYSPHAVAEHAVALILTLNRKTHKAYNRVREGNFSLEKLS-GFDLFQKTVGVIGTGKIGEAFARIMLGFGCKVLAFDIFPNQHLI----------DAGVQYTTIEDVLAQSDIISLHCPLTDKTLHLINDQAIAKMKNGAMLINTSRGALIDTQAVVEALKSKKLGYLGLDVYEQESNIFFNDLSEEILVDDTLARLMTFPNVLITSHQGFLTEEALTQIAVTTLNNISTFESGTKSGNEV 326          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_086493623.1 (2-hydroxyacid dehydrogenase [Novosphingobium panipatense])

HSP 1 Score: 335.1 bits (858), Expect = 2.600e-88
Identity = 179/340 (52.65%), Postives = 233/340 (68.53%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLAN-EAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEP 340
            MKVA+FS++ YD++FL  AN EA+A    H+L +LE+RL+  TA LA  HD +CAFVND++  A L+        LIALRSAG NNVDL       L +  VPAYSP+A+AEHA AL+LTL+RKIHK Y RVR+GNF+LEG+  GF L GK  GV+GTGKIG    RI+ G GC+VL  D  E P L A+             Y PLDE+L   D+ISLH PL P+T  +I  +++ KMK+GV++INTSRG ++D++A+I  LK   +G +GLD YEEEE+ F+ NLS  V+ DD  +RLMTFPNV+IT HQGF+T EA+TAIA +TI +I+ + R   P
Sbjct:    1 MKVAVFSTRPYDREFLDSANDEAKA---GHALFYLESRLNSQTAHLARDHDCVCAFVNDQLGRAELEILAAGGTRLIALRSAGFNNVDLGAAENLGLRIGRVPAYSPDAIAEHAAALILTLNRKIHKAYARVREGNFALEGLL-GFDLKGKVAGVIGTGKIGINLARILKGFGCEVLASDPFETPELAAI----------GGRYVPLDELLARCDVISLHCPLTPETHHMIGREAIAKMKRGVMLINTSRGAVMDARAIIAGLKSGKVGYVGLDVYEEEEDLFFENLSDQVIRDDVFVRLMTFPNVLITGHQGFFTREAMTAIAGTTIDNISAFERSGAP 326          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_048885117.1 (2-hydroxyacid dehydrogenase [Erythrobacter atlanticus] >AKQ41605.1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding [Erythrobacter atlanticus])

HSP 1 Score: 333.6 bits (854), Expect = 7.600e-88
Identity = 170/333 (51.05%), Postives = 232/333 (69.67%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEY 334
            M++A+FSS++YD+ FL  A  A+  + +H  T+L+ +LD  +A LA+ HD +CAFVND +   VL+    + + LIALRSAG N+VDL     + L++  VPAYSP+AVAEH  AL+L+L+RKIHK Y RVR+GNF+LEG+  GF L G+TVG++GTG IG C   IM G GC +L +D + +P ++ L             Y  LDE+ + SDIISLH PL P+T  LI+H ++ KMK+GV++INTSRGG+VD+KA+   LK   IG +GLD YEEEE  F+ NLS  ++ DD   RL+TFPNV+IT HQ F+T EA+TAIAE+TI +IT +
Sbjct:    1 MRIAVFSSKNYDRTFLDAA--AERTDGKHQFTYLDGQLDKQSALLAKDHDAVCAFVNDRLDRQVLEILAREGVRLIALRSAGFNHVDLEAARMEGLTVARVPAYSPDAVAEHTAALILSLNRKIHKAYARVREGNFALEGLL-GFDLRGRTVGIVGTGNIGLCMAGIMRGFGCQLLAHDPQPDPQMENL----------GGRYVNLDELFERSDIISLHCPLTPQTHHLIDHQAIGKMKEGVMLINTSRGGVVDAKALTAGLKSGKIGSVGLDVYEEEENLFFENLSNQLIQDDVFARLLTFPNVLITGHQAFFTREAMTAIAETTIANITRF 320          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_073100560.1 (2-hydroxyacid dehydrogenase [Leeuwenhoekiella marinoflava] >SHF86237.1 D-lactate dehydrogenase [Leeuwenhoekiella marinoflava DSM 3653])

HSP 1 Score: 333.6 bits (854), Expect = 7.600e-88
Identity = 171/338 (50.59%), Postives = 236/338 (69.82%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTE 339
            MKVA FS++ YD+ F    N     + +H LTF E  L+  TA+LA+  + +C FVND+++   L+K  +  I LIALR AG NNVDLA  A+  +++V VPAYSP+AVAEHA+AL+LTL+RK HK YNRVR+ NFSLE +T GF ++GKTVGV+GTG IG CF +IM+G GC VL YD++    L+ L          S  Y  +DE+LQ SDIISLH PL  +T  L+N D+  KMKKG ++INT RG L+D+ +V+++LK++ +G +G+D YE+E   F+ +LS+ V  DD  +RLM+FPNV+IT HQGF+T EAL  IA+ T++++TE+  G E
Sbjct:    1 MKVAFFSTKKYDQDFFEKINS----DNKHQLTFFETALNVHTASLAQDFEAVCVFVNDDLNKKNLEKLADCGIKLIALRCAGFNNVDLAAAAENNITIVRVPAYSPQAVAEHAVALMLTLNRKTHKAYNRVRENNFSLEKLT-GFNIYGKTVGVIGTGIIGICFAKIMLGFGCKVLAYDIKPADELKDL----------SVNYVAIDELLQESDIISLHCPLNEQTHHLMNTDAFNKMKKGAMLINTGRGALIDTASVVEALKQEKLGYLGIDVYEQESGLFFNDLSETVNKDDDFLRLMSFPNVLITGHQGFFTKEALDQIAQVTLKNLTEFESGNE 323          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_088892732.1 (2-hydroxyacid dehydrogenase [Leptolyngbya ohadii])

HSP 1 Score: 333.6 bits (854), Expect = 7.600e-88
Identity = 169/333 (50.75%), Postives = 229/333 (68.77%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEY 334
            MKVA+FS++ YD++FL +AN     ++ H L F E  LD  +A+LA  +  +C FVND   +  L+      + L+ALR AG NNVDL   ++  + +V VPAYSP AVAEH +A++ TL+RK H+ YNRVR+GNFSLEG+  G+ LHG+TVGV+GTGKIG+ F +IM G GC VLGYD+ +NPA +A+             Y  L E+L  SDIISLH PL P+T  LIN  ++ KMK G ++INTSRGGLVD++A I+ LK   IG +GLD YE+E + F+ +LS +++ DD   RL TFPNV+IT HQ F+T EAL  IAE+T+Q+IT++
Sbjct:    1 MKVAVFSTRQYDRQFLEVANY----DHEHELVFFEVSLDRNSASLANRYPAVCLFVNDVADATTLEILASHGVALVALRCAGFNNVDLRAASRLGIRVVRVPAYSPYAVAEHVVAMIQTLNRKTHRAYNRVREGNFSLEGLL-GYDLHGRTVGVVGTGKIGQIFAQIMQGFGCRVLGYDLFKNPAFEAIG-----------HYVQLPELLSQSDIISLHCPLTPETYHLINQQAIEKMKLGAMLINTSRGGLVDTEAAIEGLKSHKIGALGLDVYEQESDLFFEDLSNEIIQDDLFERLTTFPNVLITAHQAFFTKEALENIAETTLQNITDF 317          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_026967537.1 (2-hydroxyacid dehydrogenase [Algoriphagus terrigena])

HSP 1 Score: 332.8 bits (852), Expect = 1.300e-87
Identity = 173/338 (51.18%), Postives = 228/338 (67.46%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTE 339
            MKVA FS++ YD++    A      + RHS  + E +LD  T +LAE H  IC+FVND +  AV+ K     I LIALR AG N +DL   A   + +V VPAYSPEAVAEHA AL+LTLSRK HK YNRVR+ NFSLEG+T G  +HGKT+GV+GTG IG  F RI  G GC ++ YDV EN  ++ +             Y PL EVL +S IISLH PL P+T  LIN  S+  M+ GV +INTSRG L+++KAVI +LK K IG +G+D YE+EE  F++NLS++++ D+Q+ RLMTFPNV++T HQ F T EAL  I+++T+++IT + +G E
Sbjct:    1 MKVACFSTKSYDRQSFDRA----LTDSRHSFGYFEVKLDLHTVSLAEGHQAICSFVNDHIDEAVMKKLDNLGIKLIALRCAGYNQIDLKAAAAHGIKVVRVPAYSPEAVAEHAFALILTLSRKTHKAYNRVRENNFSLEGLT-GVNIHGKTIGVIGTGAIGRAFCRIANGFGCKIVAYDVIENEEMKQM----------GVTYLPLAEVLASSHIISLHCPLTPETHHLINAKSIALMRDGVALINTSRGALIETKAVIKALKNKKIGYLGIDVYEQEENIFFKNLSEEIMQDEQIARLMTFPNVLVTGHQAFLTKEALEQISKTTLENITAFEKGEE 323          
The following BLAST results are available for this feature:
BLAST of NO01G05200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_073081450.14.000e-8952.522-hydroxyacid dehydrogenase [Chitinophaga jiangnin... [more]
WP_026950282.16.900e-8952.252-hydroxyacid dehydrogenase [Algoriphagus mannitol... [more]
WP_031494991.19.000e-8951.652-hydroxyacid dehydrogenase [Bryobacter aggregatus... [more]
WP_054280198.11.200e-8852.082-hydroxyacid dehydrogenase [Chitinophagaceae bact... [more]
WP_064198282.12.000e-8851.312-hydroxyacid dehydrogenase [Emticicia sp. MM][more]
WP_086493623.12.600e-8852.652-hydroxyacid dehydrogenase [Novosphingobium panip... [more]
WP_048885117.17.600e-8851.052-hydroxyacid dehydrogenase [Erythrobacter atlanti... [more]
WP_073100560.17.600e-8850.592-hydroxyacid dehydrogenase [Leeuwenhoekiella mari... [more]
WP_088892732.17.600e-8850.752-hydroxyacid dehydrogenase [Leptolyngbya ohadii][more]
WP_026967537.11.300e-8751.182-hydroxyacid dehydrogenase [Algoriphagus terrigen... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007738NSK007738Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05200.1NO01G05200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551316gene_551Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100083g18gene1174Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05200.1NO01G05200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05200 ID=NO01G05200|Name=NO01G05200|organism=Nannochloropsis oceanica|type=gene|length=3110bp
CGATCCAGCAGACCTGCGGCGTACACCATGGCAAAGTCAGGGTTTAGCAA
AATAGACGGATCGCATCATGAATCATGATGGTGGCATGTGAATGAGTTTG
CCACCCATTCGGCGGGTGGCGGTTGGGACTTTTTTTTTCATTCTCTGGAC
CCAATGCCCCCCATTCCCTGCACTCACGACATAAAAGATGCAGAAATTGT
GGTTTATAACATTGCCTTGGTGAGTCACAGTGTTCACAGTTGCTTTGTTT
GATTTTGACTCTCATTTTTACCCGTCAAAGTGACCAAAGAACAAGTGCTG
CATGGCAAACTGGACGTCAATCGCTGGAGACTTGTCCCGGAAACAGCGAT
AGCCATCATGTTGTATTCTTGAATGGCCGGATGAAAAAGTCCTGACAATT
GGTAAGAAAGTGACAAACACTTCTGAAGAGCCACAGATGTTGAGACGGAA
TTCGAATTCGAAAGTCGATTGTATTTCCTGCCCGGCGCGCACTTGGGCCC
CCAGGCCGTGCTCGGCAGAATGCGATATGACATAACACACTTCATACCCT
TCCTGGACAGCTCCGTCTCGTTTCCCTTGCCAGCCAGAGTGTCCTGTTGC
CAAGATGAAGGTTGCCATTTTTAGCAGCCAGGACTACGATAAGAAGTTCT
TGACGCTCGCGAATGAGGCGCAAGCCCCCGAGTACAGgtatgtactgcat
gtatgtgacaggagttgctcgatcccccaagtttgcgtctgtatgtcaca
taggaagaagaggaagaggaaaggaggcgcggagtcaaaggacgtggctc
gagtgacagactcgcctcatcctcttcccttcatcaatgtcagGCACTCT
CTTACCTTTTTGGAAGCCCGCCTGGACGGCATCACCGCAACGCTTGCCGA
GCATCACGACGTGATATGTGCCTTTGTCAATGACGAGGTGTCGTCTGCCG
TGCTGGACAAGTGCAAGGAACAAAACATCGGGCTCATTGCTTTGCGGAGT
GCCGGGTGCAACAACGTGGACTTGGCATATCTGGCCAAGAAGGAACTCTC
CCTGGTTCACGTCCCCGCCTACTCCCCTGAGGCTGTGGCCGAGCATGCCT
TGGCGCTTTTGCTGACCCTCAGCCGCAAGATTCATAAGgtaacttgaacg
ggcgaaaacatcaccatgttgtgttttcctgacttctccattcatttcat
tcctcctacacggctccagATCTATAACCGGGTGCGAGACGGGAACTTCT
CTTTGGAAGGTGTGACGCCTGGCTTTGTCCTTCACGGCAAGACGGTGGGT
GTTCTAGGCACGGGCAAGATTGGGGAGTGCTTCATCCGCATCATGATGGG
TCTCGGTTGTGACGTGTTGGGCTATGACGTGAGGGAGAACCCGGCGCTCC
AAGCCCTTCAACAGCAATGCCGTGGAGATGGTAAAGGAAGCTTCGAATAC
AAGCCTTTGGATGAAGTATTGCAGgtaagggcaatagacctgtgtggata
tatgtgcatgtgtgtgtcttttttcattcagtagataaccgccacttgta
ctctcctgtatcctccctcctgcggacatgcactattacagGCCTCGGAC
ATAATCTCCCTCCACCTTCCCTTGTTGCCGAAGACAAAAGGGCTGATCAA
CCATGACAGCCTCACCAAGATGAAGAAGgtaagtactcatatacatacag
aaagtgagagatgaaaaacactgaattggaaaatgcactcctctgttttt
aagtcatttgacttctcaagctcacgtactcaccattcgcacatggacgt
cgatgcagGGTGTGGTGATCATCAACACCTCCCGAGGCGGATTGGTGGAC
AGTAAGGCTGTCATTGACTCTCTGAAAAAGAAGCATATAGGTGGCATAGg
tatgtacgcccctcctttttctttgtgtatttgtaaagggtagcaggcaa
tcgtctttttctccactcccagtcgaagtgaaagagcgggtgaagggagg
agagggggcatgtcatcccacgatctcaccgacgcataaatctacgtttt
ctggcacttcacagGACTAGACACGTACGAGGAGGAGGAAGAATTCTTCT
ACCGCAATCTTTCTCAGGACGTGGTAGGCGACGACCAGCTCATTCGCCTC
ATgtgagtcttaggggaggaagggggagcaggaagaaaggtagagtaggg
aggaatccatggaaactctcaatatttacattctctattcttcgtttctc
cacttctctcactcctcttcgggcgtctgtagGACCTTCCCAAATGTGAT
TATCACCCCGCACCAAGGTTTCTACACTTGTGAGGCGCTGACGGCCATTG
CCGAATCCACCATCCAGAGTATCACTGAGTATGCACGgtatgtgtgctgc
attccttgctgtttcttgttttctgaattactatatgtgtgatttggaat
atttttctctccaacccttatttcatctcttcatccttctctttcttact
cttcttattctccttctccttcacaaacctaaatatgcctggacattagA
GGAACGGAGCCCGGTCCTTCCATTATCTATAAAGGCAAAGTGATCAAGCA
CATGTAATACAAATGCTACAAGACTTCTCTTAAGGCTCCAGGCGGAGGTA
CTGCCACGGCACGCGGGCAGTGGGTGGAAGCGGGCATTGGAAATGCTCAA
GTATTAGTGGAGGAGAAGGAAAGGAGCGTAGCAGATAATTATGAACCAAC
GTAAAAAGGGATATGAAAGAGAAGCAGAGGGCCAGAGGTGGTGAGAAGGT
CAGTGGGAGAGAATGGACACGTACAATTACGGTCATCACCAACATTAGAG
GTGTAGGCGCATTAACGGCAGTACGAGGGCCACGAGCCCCGCAGCAGAAG
AAACAGCAAAAGCAGCGGCAGCAGTAACGACAGCGAAATGCAGCAAATTA
GATCATATTTCCGCATTCTAAACTAACCTGCATCATTGCTACTTAGAACA
GATTAAAGGGAACATCATGTGTGATATCAAGGTAGGCGGACGAAGACGAG
AGGGGCAGCTTGCTTACTCGCACAAATCTTGAGTGGGAAATAAAACGATT
GTACTCCAAT
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protein sequence of NO01G05200.1

>NO01G05200.1-protein ID=NO01G05200.1-protein|Name=NO01G05200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bp
MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHD
VICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVH
VPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGK
TVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGS
FEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRG
GLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLM
TFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSIIYKGKVI
KHM*
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Synonyms
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