NO01G05200, NO01G05200 (gene) Nannochloropsis oceanica

Overview
NameNO01G05200
Unique NameNO01G05200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3110
Alignment locationchr1:1380548..1383657 +

Link to JBrowse

Properties
Property NameValue
DescriptionD-lactate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1380548..1383657 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR006139D-isomer_2_OHA_DH_cat_dom
IPR006140D-isomer_DH_NAD-bd
Homology
BLAST of NO01G05200 vs. NCBI_GenBank
Match: EWM29440.1 (d-lactate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 489.2 bits (1258), Expect = 1.100e-134
Identity = 240/347 (69.16%), Postives = 294/347 (84.73%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSIIYKG 348
            MKV +FS++DYDK+ L  AN+  A   RHSLTFLEAR++  TA+LAE +DV+C FVNDE++S+V+D  K+  + LIALRSAGCNNVDL ++ K  LS+VHVPAYSP+AVAEHALALLLTL+RK HK+YNRVR+GNF LEGVTPG VL GKTVGVLGTG IGECF+RIM+GLGC VLGYDV E+ +L ALQ++ + +G GSFEY+ LDEVLQASD+ISLH+PL P T+G+I   ++ KMK+ V++INTSRGGLVD+KAVI +LKKKHIG +GLDTYEEE +FFYR+LSQ+VV DDQLIRLMTFPNV++TPHQGFYT EAL AIA STI SI+E++R T+P  SIIY+G
Sbjct:    1 MKVVVFSTKDYDKESLIAANDDLATADRHSLTFLEARVEETTASLAEGYDVVCCFVNDEITSSVIDTWKKSGVKLIALRSAGCNNVDLDHVVKCGLSVVHVPAYSPQAVAEHALALLLTLNRKTHKVYNRVREGNFCLEGVTPGIVLAGKTVGVLGTGNIGECFVRIMLGLGCHVLGYDVVESHSLVALQEKGKIEGGGSFEYRSLDEVLQASDVISLHMPLTPDTQGIIGPRNIKKMKENVILINTSRGGLVDTKAVITALKKKHIGALGLDTYEEEGDFFYRDLSQEVVSDDQLIRLMTFPNVLVTPHQGFYTREALLAIASSTITSISEFSRETQPASSIIYRG 347          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: XP_005855603.1 (D-lactate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU20766.1 D-lactate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 462.2 bits (1188), Expect = 1.400e-126
Identity = 232/348 (66.67%), Postives = 284/348 (81.61%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVL--------------QASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYA 335
            MKV +FS++DYDK+ L  AN+  A   RHSLTFLEAR++  TA+LAE +DV+C FVNDE++S+V+D  K+  + LIALRSAGCNNVDL ++ K  LS+VHVPAYSP+AVAEHALALLLTL+RK HK+YNRVR+GNF LEGVTPG VL GKTVGVLGTG IGECF+RIM+GLGC VLGYDV E+ +L ALQ++ + +G GSFEY+ LDEVL              QASD+ISLH+PL P T+G+I   ++ KMK+ V++INTSRGGLVD+KAVI +LKKKHIG +GLDTYEEE +FFYR+LSQ+VV DDQLIRLMTFPNV++TPHQGFYT EAL AIA STI SI+E++
Sbjct:    1 MKVVVFSTKDYDKESLIAANDDLATADRHSLTFLEARVEETTASLAEGYDVVCCFVNDEITSSVIDTWKKSGVKLIALRSAGCNNVDLDHVVKCGLSVVHVPAYSPQAVAEHALALLLTLNRKTHKVYNRVREGNFCLEGVTPGIVLAGKTVGVLGTGNIGECFVRIMLGLGCHVLGYDVVESHSLVALQEKGKIEGGGSFEYRSLDEVLQLVTHSTLFALSGYQASDVISLHMPLTPDTQGIIGPRNIKKMKENVILINTSRGGLVDTKAVITALKKKHIGALGLDTYEEEGDFFYRDLSQEVVSDDQLIRLMTFPNVLVTPHQGFYTREALLAIASSTITSISEFS 348          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: XP_005852524.1 (D-lactate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU23308.1 D-lactate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 451.8 bits (1161), Expect = 1.900e-123
Identity = 222/339 (65.49%), Postives = 278/339 (82.01%), Query Frame = 0
Query:   16 LTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRG-DGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSIIYKGKVIKHM 354
            +T AN A AP +RH+LT+ +A L+  TA+LA  H V+C FVNDEV+SAV+D+  E  + LIALRSAGCNNVDL Y+AK  LS+ HVPAYSP++VAEHALALLLTL+RK HK+YNRVRDGNF LEG++PGF L GKTVG+LGTG+IG+ F RIM+GLGC VLGYDV ENPAL ALQ++     G GSF+Y  +DEVL+ASD++SLH+PL P T+G+I  ++L KMKKGV++INTSRGGLVD+KAVI++LK KHI  +GLDTYE+EE FFYRNLS+++V DDQL RLMT  NV+ITPH+GFYT EAL+AIA STI S++++  G +P  +IIYKG VIK +
Sbjct:    1 MTAANNALAPAHRHTLTYFDAHLEEKTASLAAGHQVVCCFVNDEVNSAVVDQFLELGVDLIALRSAGCNNVDLEYVAKCGLSVFHVPAYSPQSVAEHALALLLTLNRKTHKVYNRVRDGNFCLEGMSPGFSLAGKTVGILGTGRIGDSFARIMVGLGCHVLGYDVMENPALLALQKKGNNIAGWGSFKYTSMDEVLRASDVLSLHMPLTPDTQGIIGGNNLKKMKKGVILINTSRGGLVDTKAVIEALKTKHIRAVGLDTYEDEEAFFYRNLSEEIVKDDQLSRLMTLSNVLITPHKGFYTQEALSAIASSTIASVSDFEGGMKPDSAIIYKGTVIKKL 339          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_057939932.1 (2-hydroxyacid dehydrogenase [Algoriphagus resistens])

HSP 1 Score: 353.2 bits (905), Expect = 9.300e-94
Identity = 179/348 (51.44%), Postives = 243/348 (69.83%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSIIYKGK 349
            M+VA FS++ YD++    + +   P+Y+H +T+ EA+LD  T  LA+ HD IC FVND +   +LD+  E  I  I LR AG N VDL   AK ++ L  VPAYSPEAVAEHALALL+TLSRK HK YNRVRD N+S+EG+T GF ++GKT GV+GTG IG+ F +IM+G+GC VL YD+ EN  L+ +             Y PL+E+L  SDIISLH PL   T  LIN ++L+ MK GVV+INTSRG L+DSKAVI++LK + +G +G+D YE+EE+ F++N S++++ D+Q+ RLMTFPNV+IT HQ F T EAL  I+E+T+Q++ E A G +    + Y+ K
Sbjct:    1 MRVAFFSTKSYDRQ----SFDHLLPDYKHKVTYFEAKLDRNTVALAKGHDAICTFVNDCLDETILDQLHEMGIKAIVLRCAGYNQVDLKMAAKLDIKLCRVPAYSPEAVAEHALALLMTLSRKTHKAYNRVRDNNYSIEGLT-GFNINGKTTGVIGTGAIGKAFCKIMLGMGCKVLAYDIYENEELKRM----------GVRYMPLEELLAESDIISLHCPLNADTFHLINENTLSHMKDGVVLINTSRGALIDSKAVINALKSRKVGNLGIDVYEQEEDLFFQNRSEEILQDEQIARLMTFPNVLITGHQAFLTNEALVHISETTLQNLDELASGGKLSNEVKYQPK 333          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_105354853.1 (2-hydroxyacid dehydrogenase [Blastopirellula marina] >PQO30769.1 hydroxyacid dehydrogenase [Blastopirellula marina])

HSP 1 Score: 344.4 bits (882), Expect = 4.300e-91
Identity = 182/338 (53.85%), Postives = 232/338 (68.64%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTE 339
            M+VA+F ++ YD++FL  A +    E+    TF+E RL   TA LA   + IC FVNDE+SSAVL K  E    LIA+R AG NNVDL    +  + +  VPAYSP AVAEHA+ L+LTL+RK HK YNRVR+G+FSL G+  GF LHGKTVGV+GTGKIG+ F RIM G GCD+L +DV E        + CR   K   +YKPLDEVL  SDIISLH PLLP T+ LI   ++ K+K G +IINTSRGGL+++ A I+ LK   IG +G+D YEEE E F+ + SQ V+ DD   RL+TFPNV++T HQGF+T  AL AIA+ T+Q++ E+A G E
Sbjct:    1 MEVAVFGTKSYDRQFLLAAADGTDIEW----TFIEPRLTETTAPLASPFEAICCFVNDEISSAVLQKLSEGRTKLIAMRCAGYNNVDLPVAHELGIQVARVPAYSPYAVAEHAVGLILTLNRKYHKAYNRVREGDFSLSGLL-GFDLHGKTVGVIGTGKIGQIFARIMHGFGCDLLAFDVHE-------AEDCR---KWGVKYKPLDEVLAQSDIISLHCPLLPATRHLIGEAAIGKLKPGAMIINTSRGGLINTMAAINGLKSGQIGSLGIDVYEEEAELFFEDKSQSVIQDDVFARLVTFPNVLVTGHQGFFTQNALEAIAQVTVQNLNEFAAGEE 323          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_086540986.1 (2-hydroxyacid dehydrogenase [Algoriphagus antarcticus])

HSP 1 Score: 342.8 bits (878), Expect = 1.300e-90
Identity = 178/348 (51.15%), Postives = 237/348 (68.10%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSIIYKGK 349
            M+VA FS++ YDK+    + +   P++ H LTF E  LD  T  LA   D IC+FVND +   +L K  E  +  I LR AG N VDL   ++  L +  VPAYSPEAVAEHALALL+TLSRK HK YNRVRD NFS++G+T GF +HGKT G++GTG IG+ F +IM+G+GC VL YD+ EN  L++L             Y P +E+   S+IISLH PL P+T  LIN  SL+KMK  VV+INTSRG L+D+KAVI +LKK+ +G +G+D YE+EE+ F++NLS++++ D+Q+ RLMTFPNV+IT HQ F T EAL  IA+ T+Q++ E A G E    + +K K
Sbjct:    1 MRVAFFSTKSYDKE----SFKHYLPDHTHELTFFEPNLDSKTIALAAGFDTICSFVNDLLDEKILTKLSELGVKNIVLRCAGYNQVDLKKASELGLKICRVPAYSPEAVAEHALALLMTLSRKTHKAYNRVRDNNFSIDGLT-GFNIHGKTAGIIGTGAIGKAFCKIMLGIGCKVLAYDIYENEELKSL----------GVTYLPREELFAQSEIISLHCPLTPETFHLINPKSLSKMKDEVVLINTSRGALIDTKAVIKALKKRKVGNLGIDVYEQEEDLFFQNLSEEILLDEQIARLMTFPNVLITGHQAFLTNEALAQIAKITLQNLDELAAGGELTNEVKWKSK 333          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_026954864.1 (2-hydroxyacid dehydrogenase [Algoriphagus vanfongensis])

HSP 1 Score: 342.0 bits (876), Expect = 2.100e-90
Identity = 176/336 (52.38%), Postives = 238/336 (70.83%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARG 337
            MK+A +S++ YDK+    + +  A ++ H +T+ EA+LD  + +LA  H+V+CAFVND +  +VL K K+  + LIALR AG N VDL      E+ LV VP YSPEAVAEH  AL+LTLSRK HK YNRVR+ NFSLEG+T GF LHGKT+GV+GTG IG+ F  I +G G  VL YD+ EN  L++         KG   Y  L+E+   SDIISLH PL P+TK LIN  ++ +MK GVV+INTSRG L+++K+VI +LK K IG +G+D YE+EE+ F++NLS++++ DDQ+ RLMTFPNV+IT HQ F T EAL  IA++T+++I+E+  G
Sbjct:    1 MKIAFYSAKSYDKE----SFDHFAQDFGHEITYFEAKLDKHSTSLAADHEVVCAFVNDILDKSVLKKLKDTGVKLIALRCAGYNQVDLEAAKDLEIPLVRVPVYSPEAVAEHGFALILTLSRKTHKAYNRVRESNFSLEGLT-GFNLHGKTIGVIGTGAIGQAFCNIALGFGTQVLAYDLYENEELKS---------KG-IRYADLNELFAQSDIISLHCPLTPETKHLINAKTIKQMKDGVVLINTSRGALIETKSVIKALKSKKIGYLGIDVYEQEEDLFFKNLSEEIIPDDQISRLMTFPNVLITGHQAFLTREALAQIAQTTLRNISEFEAG 321          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_087937638.1 (2-hydroxyacid dehydrogenase [Algoriphagus faecimaris] >SDC52873.1 D-lactate dehydrogenase [Algoriphagus faecimaris])

HSP 1 Score: 341.3 bits (874), Expect = 3.700e-90
Identity = 175/336 (52.08%), Postives = 232/336 (69.05%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARG 337
            M+VA FS++ YDK    ++    A  Y H  TF EA+LD  +A LAE HD +CAFVND++    L   KE  + LIALR AG N VDL       +S+V VPAYSPEAVAEHA AL+LTLSRK HK YNRVR+ N+S+EG+T G  LHGKTVGV+GTG IG+ F RI +G GC VL YD+ EN  L++L             Y  LDE++Q S I+SLH PL P TK LIN ++L KM+ G ++INTSRG L+++K+VI SLK   IG +G+D YE+EE+ F++N S++++ D+Q+ RLMTFPNV+IT HQ F T EAL  IA++T+ +++ + +G
Sbjct:    1 MRVAFFSTKSYDK----ISFARNADSYTHEFTFFEAKLDRHSAVLAEGHDAVCAFVNDQLDKQTLKSLKEVGVELIALRCAGYNQVDLDCARNLGISIVRVPAYSPEAVAEHAFALILTLSRKTHKAYNRVRENNYSIEGLT-GINLHGKTVGVIGTGAIGKAFCRIALGFGCKVLAYDIYENEELKSL----------GVSYVTLDEIMQQSTILSLHCPLTPDTKHLINKNTLEKMQDGCMLINTSRGALIETKSVIRSLKNGKIGFLGIDVYEQEEDLFFQNRSEEILQDEQIARLMTFPNVLITGHQAFLTKEALDQIAKTTLDNLSAFEQG 321          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_086102318.1 (2-hydroxyacid dehydrogenase [Chitinophagaceae bacterium IBVUCB2] >OSZ79872.1 hydroxyacid dehydrogenase [Chitinophagaceae bacterium IBVUCB2])

HSP 1 Score: 341.3 bits (874), Expect = 3.700e-90
Identity = 176/334 (52.69%), Postives = 234/334 (70.06%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYA 335
            MK+A FS+Q YDK++    N+      +H + F EARL+  T  LA   + ICAFVND + + ++   KE  I +IA R AG NNVD+      ++++V VPAYSP AVAEHALALL+TL+RK HK YNRVR+GNFSL+ +T GF L+GKTVGV+GTGKIG+CF RIM GLGC VL +D+  N  +++          G  +Y PL E+LQ SDI+SLH PL  +TK LIN DSL+ MK G ++INTSRG L+D+KAVI +LK   +G +G+D YE EE+ F+ +LS+ ++ DD L+RL+ F NV+IT HQGF T EALT IA  T+Q+IT++A
Sbjct:    1 MKIAFFSTQPYDKEYFERYND------QHEIIFFEARLNEQTVKLAAGCEAICAFVNDRLDAGIITSLKEMGIKIIAQRCAGFNNVDVVAARDNDIAVVRVPAYSPHAVAEHALALLMTLNRKTHKAYNRVREGNFSLDRLT-GFDLYGKTVGVIGTGKIGQCFARIMQGLGCTVLAFDLIANKEMES----------GGVKYLPLLELLQQSDIVSLHCPLTEQTKHLINKDSLSTMKNGAMLINTSRGALIDTKAVIAALKNGKLGYLGIDVYELEEKLFFHDLSESIITDDMLVRLLGFSNVLITSHQGFLTDEALTEIARVTLQNITDFA 317          
BLAST of NO01G05200 vs. NCBI_GenBank
Match: WP_035068810.1 (2-hydroxyacid dehydrogenase [Anditalea andensis] >KEO75831.1 2-hydroxyacid dehydrogenase [Anditalea andensis])

HSP 1 Score: 339.0 bits (868), Expect = 1.800e-89
Identity = 171/336 (50.89%), Postives = 239/336 (71.13%), Query Frame = 0
Query:    1 MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHDVICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVHVPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGKTVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGSFEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRGGLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLMTFPNVIITPHQGFYTCEALTAIAESTIQSITEYARG 337
            MKVA FSS+ YDK++  L N+    E +H LTF E  L+  T  L   ++ IC FVND+V +  +++  E  + +IALR AG NN+DL    +K++ +V VPAYSPEAVAEHA+AL++TL+RKIHK +NRVR+GNFS+E +T GF L+ KTVGV+GTGKIG  F  IM+G GC ++ YD  E   L+          +   +Y  LDE+L+ SDIISLH PL PKT+ L+N+++ TKMK+GV+IINTSRG L+ +   I++LKK+ IG +G+D YEEEE+ F+R+LS+ ++ D+ L+RL+ FPNV+IT HQGF T EALT I+ +T+ +IT + +G
Sbjct:    1 MKVAFFSSKSYDKEYFNLHNQ----EGKHDLTFFEVSLNPDTIELTNGYEAICVFVNDKVDAQAIERLSENGVKIIALRCAGYNNIDLKAAHEKDIKVVRVPAYSPEAVAEHAVALIMTLNRKIHKAFNRVREGNFSIEKLT-GFNLYKKTVGVIGTGKIGIAFCNIMLGFGCKIIAYDPYEADGLK----------EKGIQYTSLDELLEKSDIISLHCPLTPKTQHLLNNEAFTKMKEGVMIINTSRGALIKTSDAIEALKKRKIGYLGVDVYEEEEKLFFRDLSEYLIQDEILLRLIGFPNVLITAHQGFLTQEALTQISTTTLNNITSFEKG 321          
The following BLAST results are available for this feature:
BLAST of NO01G05200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29440.11.100e-13469.16d-lactate dehydrogenase [Nannochloropsis gaditana][more]
XP_005855603.11.400e-12666.67D-lactate dehydrogenase [Nannochloropsis gaditana ... [more]
XP_005852524.11.900e-12365.49D-lactate dehydrogenase [Nannochloropsis gaditana ... [more]
WP_057939932.19.300e-9451.442-hydroxyacid dehydrogenase [Algoriphagus resisten... [more]
WP_105354853.14.300e-9153.852-hydroxyacid dehydrogenase [Blastopirellula marin... [more]
WP_086540986.11.300e-9051.152-hydroxyacid dehydrogenase [Algoriphagus antarcti... [more]
WP_026954864.12.100e-9052.382-hydroxyacid dehydrogenase [Algoriphagus vanfonge... [more]
WP_087937638.13.700e-9052.082-hydroxyacid dehydrogenase [Algoriphagus faecimar... [more]
WP_086102318.13.700e-9052.692-hydroxyacid dehydrogenase [Chitinophagaceae bact... [more]
WP_035068810.11.800e-8950.892-hydroxyacid dehydrogenase [Anditalea andensis] >... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007738NSK007738Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G05200.1NO01G05200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551316gene_551Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100083g18gene1174Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G05200.1NO01G05200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G05200 ID=NO01G05200|Name=NO01G05200|organism=Nannochloropsis oceanica|type=gene|length=3110bp
CGATCCAGCAGACCTGCGGCGTACACCATGGCAAAGTCAGGGTTTAGCAA
AATAGACGGATCGCATCATGAATCATGATGGTGGCATGTGAATGAGTTTG
CCACCCATTCGGCGGGTGGCGGTTGGGACTTTTTTTTTCATTCTCTGGAC
CCAATGCCCCCCATTCCCTGCACTCACGACATAAAAGATGCAGAAATTGT
GGTTTATAACATTGCCTTGGTGAGTCACAGTGTTCACAGTTGCTTTGTTT
GATTTTGACTCTCATTTTTACCCGTCAAAGTGACCAAAGAACAAGTGCTG
CATGGCAAACTGGACGTCAATCGCTGGAGACTTGTCCCGGAAACAGCGAT
AGCCATCATGTTGTATTCTTGAATGGCCGGATGAAAAAGTCCTGACAATT
GGTAAGAAAGTGACAAACACTTCTGAAGAGCCACAGATGTTGAGACGGAA
TTCGAATTCGAAAGTCGATTGTATTTCCTGCCCGGCGCGCACTTGGGCCC
CCAGGCCGTGCTCGGCAGAATGCGATATGACATAACACACTTCATACCCT
TCCTGGACAGCTCCGTCTCGTTTCCCTTGCCAGCCAGAGTGTCCTGTTGC
CAAGATGAAGGTTGCCATTTTTAGCAGCCAGGACTACGATAAGAAGTTCT
TGACGCTCGCGAATGAGGCGCAAGCCCCCGAGTACAGgtatgtactgcat
gtatgtgacaggagttgctcgatcccccaagtttgcgtctgtatgtcaca
taggaagaagaggaagaggaaaggaggcgcggagtcaaaggacgtggctc
gagtgacagactcgcctcatcctcttcccttcatcaatgtcagGCACTCT
CTTACCTTTTTGGAAGCCCGCCTGGACGGCATCACCGCAACGCTTGCCGA
GCATCACGACGTGATATGTGCCTTTGTCAATGACGAGGTGTCGTCTGCCG
TGCTGGACAAGTGCAAGGAACAAAACATCGGGCTCATTGCTTTGCGGAGT
GCCGGGTGCAACAACGTGGACTTGGCATATCTGGCCAAGAAGGAACTCTC
CCTGGTTCACGTCCCCGCCTACTCCCCTGAGGCTGTGGCCGAGCATGCCT
TGGCGCTTTTGCTGACCCTCAGCCGCAAGATTCATAAGgtaacttgaacg
ggcgaaaacatcaccatgttgtgttttcctgacttctccattcatttcat
tcctcctacacggctccagATCTATAACCGGGTGCGAGACGGGAACTTCT
CTTTGGAAGGTGTGACGCCTGGCTTTGTCCTTCACGGCAAGACGGTGGGT
GTTCTAGGCACGGGCAAGATTGGGGAGTGCTTCATCCGCATCATGATGGG
TCTCGGTTGTGACGTGTTGGGCTATGACGTGAGGGAGAACCCGGCGCTCC
AAGCCCTTCAACAGCAATGCCGTGGAGATGGTAAAGGAAGCTTCGAATAC
AAGCCTTTGGATGAAGTATTGCAGgtaagggcaatagacctgtgtggata
tatgtgcatgtgtgtgtcttttttcattcagtagataaccgccacttgta
ctctcctgtatcctccctcctgcggacatgcactattacagGCCTCGGAC
ATAATCTCCCTCCACCTTCCCTTGTTGCCGAAGACAAAAGGGCTGATCAA
CCATGACAGCCTCACCAAGATGAAGAAGgtaagtactcatatacatacag
aaagtgagagatgaaaaacactgaattggaaaatgcactcctctgttttt
aagtcatttgacttctcaagctcacgtactcaccattcgcacatggacgt
cgatgcagGGTGTGGTGATCATCAACACCTCCCGAGGCGGATTGGTGGAC
AGTAAGGCTGTCATTGACTCTCTGAAAAAGAAGCATATAGGTGGCATAGg
tatgtacgcccctcctttttctttgtgtatttgtaaagggtagcaggcaa
tcgtctttttctccactcccagtcgaagtgaaagagcgggtgaagggagg
agagggggcatgtcatcccacgatctcaccgacgcataaatctacgtttt
ctggcacttcacagGACTAGACACGTACGAGGAGGAGGAAGAATTCTTCT
ACCGCAATCTTTCTCAGGACGTGGTAGGCGACGACCAGCTCATTCGCCTC
ATgtgagtcttaggggaggaagggggagcaggaagaaaggtagagtaggg
aggaatccatggaaactctcaatatttacattctctattcttcgtttctc
cacttctctcactcctcttcgggcgtctgtagGACCTTCCCAAATGTGAT
TATCACCCCGCACCAAGGTTTCTACACTTGTGAGGCGCTGACGGCCATTG
CCGAATCCACCATCCAGAGTATCACTGAGTATGCACGgtatgtgtgctgc
attccttgctgtttcttgttttctgaattactatatgtgtgatttggaat
atttttctctccaacccttatttcatctcttcatccttctctttcttact
cttcttattctccttctccttcacaaacctaaatatgcctggacattagA
GGAACGGAGCCCGGTCCTTCCATTATCTATAAAGGCAAAGTGATCAAGCA
CATGTAATACAAATGCTACAAGACTTCTCTTAAGGCTCCAGGCGGAGGTA
CTGCCACGGCACGCGGGCAGTGGGTGGAAGCGGGCATTGGAAATGCTCAA
GTATTAGTGGAGGAGAAGGAAAGGAGCGTAGCAGATAATTATGAACCAAC
GTAAAAAGGGATATGAAAGAGAAGCAGAGGGCCAGAGGTGGTGAGAAGGT
CAGTGGGAGAGAATGGACACGTACAATTACGGTCATCACCAACATTAGAG
GTGTAGGCGCATTAACGGCAGTACGAGGGCCACGAGCCCCGCAGCAGAAG
AAACAGCAAAAGCAGCGGCAGCAGTAACGACAGCGAAATGCAGCAAATTA
GATCATATTTCCGCATTCTAAACTAACCTGCATCATTGCTACTTAGAACA
GATTAAAGGGAACATCATGTGTGATATCAAGGTAGGCGGACGAAGACGAG
AGGGGCAGCTTGCTTACTCGCACAAATCTTGAGTGGGAAATAAAACGATT
GTACTCCAAT
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protein sequence of NO01G05200.1

>NO01G05200.1-protein ID=NO01G05200.1-protein|Name=NO01G05200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=354bp
MKVAIFSSQDYDKKFLTLANEAQAPEYRHSLTFLEARLDGITATLAEHHD
VICAFVNDEVSSAVLDKCKEQNIGLIALRSAGCNNVDLAYLAKKELSLVH
VPAYSPEAVAEHALALLLTLSRKIHKIYNRVRDGNFSLEGVTPGFVLHGK
TVGVLGTGKIGECFIRIMMGLGCDVLGYDVRENPALQALQQQCRGDGKGS
FEYKPLDEVLQASDIISLHLPLLPKTKGLINHDSLTKMKKGVVIINTSRG
GLVDSKAVIDSLKKKHIGGIGLDTYEEEEEFFYRNLSQDVVGDDQLIRLM
TFPNVIITPHQGFYTCEALTAIAESTIQSITEYARGTEPGPSIIYKGKVI
KHM*
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Synonyms
Publications