NO01G05030, NO01G05030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G05030 vs. NCBI_GenBank
Match: XP_002909431.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY58245.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 69.3 bits (168), Expect = 9.200e-9 Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 36 FGLSTSMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAG 112 FG + +S +++AKERL IILAHQR LA VD+ LQ ++L CVQ+++K+ ++I VK +G +D+FEMQ+ + G Sbjct: 21 FGEAEQASSSKSVAKERLQIILAHQRGSQVLAGVDLAALQKELLECVQRHIKVANGANINIAVKNEGQLDIFEMQVPVDG 100
BLAST of NO01G05030 vs. NCBI_GenBank
Match: ETI33743.1 (cell division topological specificity factor MinE [Phytophthora parasitica P1569] >ETM33972.1 cell division topological specificity factor MinE [Phytophthora parasitica]) HSP 1 Score: 68.9 bits (167), Expect = 1.200e-8 Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 36 FGLSTSMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAG 112 FG + +S +++AKERL IILAHQR LA VD+ LQ ++L CVQ+++K+ ++I VK +G +D+FEMQ+ + G Sbjct: 21 FGEAEQASSSKSVAKERLQIILAHQRGSQVLAGVDLAALQNELLECVQRHIKVANGANINIAVKNEGHLDIFEMQVPVDG 100
BLAST of NO01G05030 vs. NCBI_GenBank
Match: ETL80782.1 (cell division topological specificity factor MinE [Phytophthora parasitica]) HSP 1 Score: 68.9 bits (167), Expect = 1.200e-8 Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 36 FGLSTSMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAG 112 FG + +S +++AKERL IILAHQR LA VD+ LQ ++L CVQ+++K+ ++I VK +G +D+FEMQ+ + G Sbjct: 21 FGEAEQASSSKSVAKERLQIILAHQRGSQVLAGVDLAALQNELLECVQRHIKVANGANINIAVKNEGHLDIFEMQVPVDG 100
BLAST of NO01G05030 vs. NCBI_GenBank
Match: GAX94100.1 (cell division topological specificity factor MinE, partial [Pythium insidiosum]) HSP 1 Score: 68.2 bits (165), Expect = 2.100e-8 Identity = 34/72 (47.22%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 39 STSMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQ 107 +T+ +S +++AKERL IILAHQR LA VD+Q LQ+++L CVQ+++++ ++I VK +G +D+FEMQ Sbjct: 24 ATASSSSKSVAKERLQIILAHQRGSQVLAGVDLQALQSELLECVQRHIRVANGANINIAVKHEGQLDIFEMQ 95
BLAST of NO01G05030 vs. NCBI_GenBank
Match: XP_009514046.1 (hypothetical protein PHYSODRAFT_470073 [Phytophthora sojae] >EGZ26771.1 hypothetical protein PHYSODRAFT_470073 [Phytophthora sojae]) HSP 1 Score: 67.4 bits (163), Expect = 3.500e-8 Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0 Query: 41 SMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAG 112 S +S +++AKERL IILAHQR LA VD+ LQ ++L CVQ+++K+ ++I VK +G +D+FEMQ+ + G Sbjct: 28 SASSSKSVAKERLQIILAHQRGSQVLAGVDLAALQQELLECVQRHIKVANGANINIAVKNEGHLDIFEMQVPVDG 102
BLAST of NO01G05030 vs. NCBI_GenBank
Match: AKB90673.1 (mitochondrial MinE [Andalucia godoyi]) HSP 1 Score: 67.4 bits (163), Expect = 3.500e-8 Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0 Query: 30 ARAFEGFGLSTSMTSPRNMAKERLSIIL----AHQRLADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAGAASNMT 118 +++F G S+ R++A+ERL IIL A RLA VDI LQ D+LA VQKYV ++ + V+I VK++G +DVFEMQ+ LA + +T Sbjct: 12 SKSFPGSVTQVSVPETRSIARERLHIILSRERASNRLAHVDIPALQRDLLATVQKYVPVSTNE-VTISVKKEGVLDVFEMQVVLADGSVPIT 102
BLAST of NO01G05030 vs. NCBI_GenBank
Match: OWZ21852.1 (Cell division topological specificity factor MinE [Phytophthora megakarya]) HSP 1 Score: 67.0 bits (162), Expect = 4.600e-8 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 36 FGLSTSMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAG 112 FG + + +++AKERL IILAHQR LA VD+ LQ ++L CVQ+++K+ ++I VK +G +D+FEMQ+ + G Sbjct: 21 FGEAEHSSKSKSVAKERLQIILAHQRGSQVLAGVDLAVLQQELLECVQRHIKVANGANINIAVKNEGHLDIFEMQVPVDG 100
BLAST of NO01G05030 vs. NCBI_GenBank
Match: XP_024579115.1 (cell division topological specificity factor [Plasmopara halstedii] >CEG42746.1 cell division topological specificity factor [Plasmopara halstedii]) HSP 1 Score: 66.6 bits (161), Expect = 6.000e-8 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 36 FGLSTSMTSPRNMAKERLSIILAHQR----LADVDIQQLQADVLACVQKYVKITPEQAVSIKVKQDGGVDVFEMQIALAG 112 FG ++S +++ KERL IILAHQR LA VD+ LQ ++L CVQ+++K++ ++I VK +G D+FEMQ+ + G Sbjct: 19 FGDVEQVSSSKSVVKERLQIILAHQRGSQILAGVDLAALQKELLECVQRHIKVSNGANINIAVKNEGQFDIFEMQVPVDG 98 The following BLAST results are available for this feature:
BLAST of NO01G05030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G05030 ID=NO01G05030|Name=NO01G05030|organism=Nannochloropsis oceanica|type=gene|length=1992bpback to top protein sequence of NO01G05030.1 >NO01G05030.1-protein ID=NO01G05030.1-protein|Name=NO01G05030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=122bpback to top Synonyms
Publications
|