NO01G04950, NO01G04950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04950 vs. NCBI_GenBank
Match: EWM29425.1 (isovaleryl- dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 627.5 bits (1617), Expect = 3.400e-176 Identity = 318/413 (77.00%), Postives = 340/413 (82.32%), Query Frame = 0 Query: 63 PLRPFSSEPAGSSSYSTMTAFDPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYARTGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKRHHERLL 476 P R FSSEP S DPFNPTEEH+ LR +RAFVEKEVDPQAL FNRREEFNL LFRKLGELGLLGL+V EYGGSGMDA AVAI HEE+SAADPAFCLAYLAHSLLFVNNLAQNG+ AQK KYLP AC+G VGGMCMSEPGAGTDVLGM T A K+ DGS Y LNGAKMWITNGT+DG++TGDVYLVYA+TG+ KD+SMF+VEKG+ GF LGQKLEDKLGMRASMTAELVFD+CRVP+ENLVGKE GAA CMMRNLEIERVGLAAM Q+HVAESYAEYMAGR YLY+VAN LDL+SSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGT+EAHHKNMVRDLK+HHERLL Sbjct: 59 PRRRFSSEPVPSPP----VQIDPFNPTEEHTHLRTTVRAFVEKEVDPQALVFNRREEFNLPLFRKLGELGLLGLSVPAEYGGSGMDATAVAIAHEELSAADPAFCLAYLAHSLLFVNNLAQNGSHAQKSKYLPAACAGTAVGGMCMSEPGAGTDVLGMGTAATKASDGSHYILNGAKMWITNGTVDGKSTGDVYLVYAKTGQAAKDVSMFLVEKGSPGFRLGQKLEDKLGMRASMTAELVFDDCRVPLENLVGKEDGAAACMMRNLEIERVGLAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRHVAESYAEYMAGRAYLYYVANQLDLSSSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTNEAHHKNMVRDLKKHHERLL 467
BLAST of NO01G04950 vs. NCBI_GenBank
Match: CBJ27257.1 (isovaleryl-CoA dehydrogenase [Ectocarpus siliculosus]) HSP 1 Score: 582.8 bits (1501), Expect = 9.700e-163 Identity = 284/399 (71.18%), Postives = 328/399 (82.21%), Query Frame = 0 Query: 72 AGSSSYSTMTAFDPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYARTGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKRH 471 AG+ ST A D FNPTEEH QLR M+R+FVE EVDPQAL +NR E+FN F++LGELGLLG+TV+ +YGGSGMDA+A IVHEE+SAADPA CL+YLAHS+LFVNNL QNG+ Q+ ++LP AC G + GMCMSEPGAGTDVLGM T AV S DG + ++GAKMWITNGT DG TTGDV+LVYARTG G +D+SMF+VEKG GF LGQK+E K GMRASMTAELVFD V E+LVG E+GA +CMMRNLEIERV LAAM VG+ARRC+E MN Y KERKAFG +N FGQ+QKH+A+SYAEYMAG+ YLY VA +LDL+S+GNGLDADG KLYC M K VADRA+QVLGGYGY EYQ+ERLWRDAKLLEIGGGT EAHHKNMVRDL ++ Sbjct: 38 AGARRRSTTGASDFFNPTEEHQQLREMVRSFVENEVDPQALQYNREEKFNAEAFKRLGELGLLGVTVAPQYGGSGMDASAACIVHEELSAADPALCLSYLAHSMLFVNNLEQNGSDEQRSRFLPSACEGSTIAGMCMSEPGAGTDVLGMTTKAVPSPDGLSFKIDGAKMWITNGTTDGLTTGDVFLVYARTGPGRQDISMFIVEKGMPGFELGQKIEGKCGMRASMTAELVFDGVEVGRESLVGDENGAMLCMMRNLEIERVTLAAMGVGIARRCIEAMNTYGKERKAFGSPINSFGQIQKHIADSYAEYMAGKHYLYAVAANLDLSSTGNGLDADGTKLYCTTMAKNVADRAMQVLGGYGYCDEYQIERLWRDAKLLEIGGGTLEAHHKNMVRDLAKN 436
BLAST of NO01G04950 vs. NCBI_GenBank
Match: OLP79354.1 (Isovaleryl-CoA dehydrogenase, mitochondrial [Symbiodinium microadriaticum]) HSP 1 Score: 582.4 bits (1500), Expect = 1.300e-162 Identity = 290/415 (69.88%), Postives = 333/415 (80.24%), Query Frame = 0 Query: 62 QPLRPFSSEPAGSSSYSTMTAFDP-------FNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYARTGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKR 470 Q P S PA +S+ T P F+P+EEH LR M+R+F E EV+PQA+ FNR E+ NL LFRKLGELGLLG+TV EYGGSGMDA A IVHEE++A DPAFCLAYLAHS+LFVNNLAQNG AQK K+LP A G V GMCMSEP GTDVLGM TTA +++G Y +NGAKMWITNGT+DG+ TGD YLVYARTG +D+S+F+VEKGT+GF LGQK++DK GMRASMTAELVF +CR+P NLVG+E AA+CMMRNLEIERV LA+MS+G+ARRCVE MNRYAK+RKAFG LN FGQ+Q+ +AESYAEY AGR+Y+Y A HL+L S GNGLDADGVKLYC MGK VADRAIQVLGGYGYVGEY VERLWRDAKLLEIGGGT+EAHHKN+VRDL R Sbjct: 37 QASSPSFSMPAAASAEPTSQVPAPVEDPGTIFSPSEEHQALREMVRSFAEAEVEPQAIDFNREEKMNLPLFRKLGELGLLGVTVPEEYGGSGMDATAAVIVHEELAAVDPAFCLAYLAHSMLFVNNLAQNGNEAQKQKWLPSAVDGSKVCGMCMSEPAVGTDVLGMKTTA--TREGDEYVINGAKMWITNGTVDGKETGDAYLVYARTGSTSRDISLFLVEKGTKGFSLGQKIQDKCGMRASMTAELVFQDCRIPASNLVGQEGKAALCMMRNLEIERVALASMSLGIARRCVEEMNRYAKDRKAFGSQLNSFGQIQRFIAESYAEYQAGRSYVYQTAKHLNLESVGNGLDADGVKLYCGHMGKMVADRAIQVLGGYGYVGEYNVERLWRDAKLLEIGGGTNEAHHKNIVRDLSR 449
BLAST of NO01G04950 vs. NCBI_GenBank
Match: PKN57635.1 (isovaleryl-CoA dehydrogenase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14]) HSP 1 Score: 540.0 bits (1390), Expect = 7.200e-150 Identity = 270/386 (69.95%), Postives = 308/386 (79.79%), Query Frame = 0 Query: 84 DPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYARTGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKR 470 D FNPTEEH LR M+RAF E+EVDPQA ++ E FNL LFRKLGELGLLG+TV +GG+GMDA A I HEE+SAADP FCLAYLAHS+LF NNLA NG AQ+ + LP ACSGE++GGM MSEPGAGTDVLGM T AV DG + L+GAKMWITNG L+ GD +LVYART G + LS+F+VEKG GF LGQK+ DKLGMRAS TAELVFD CRVP NLVG E A MMRNLE+ER+ LAAMS+G+ARR +EVMNR+A ER+AFGQ + EFGQ+Q+H+AESYAEYMAGR+Y+Y VA L L S GN +D+DGVKLYC M K VADRAIQVLGGYGYVGEYQVERLWRDAKL+EIGGGT EAHHKN+ RDL R Sbjct: 3 DLFNPTEEHLALRDMVRAFAEREVDPQAAEHDKHERFNLPLFRKLGELGLLGVTVEERWGGAGMDAVAAVIAHEELSAADPGFCLAYLAHSMLFANNLAHNGDDAQRGRLLPLACSGEILGGMAMSEPGAGTDVLGMQTRAV--ADGDDWVLDGAKMWITNGALNDAELGDAFLVYARTAPGSRGLSLFLVEKGMPGFRLGQKIHDKLGMRASTTAELVFDGCRVPGRNLVGAEGQAVKHMMRNLELERLTLAAMSLGMARRSIEVMNRHASERQAFGQPIREFGQIQRHIAESYAEYMAGRSYVYQVAAALSLKSGGNRVDSDGVKLYCGTMAKNVADRAIQVLGGYGYVGEYQVERLWRDAKLIEIGGGTVEAHHKNITRDLGR 386
BLAST of NO01G04950 vs. NCBI_GenBank
Match: OEU18177.1 (acyl CoA dehydrogenase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 534.6 bits (1376), Expect = 3.000e-148 Identity = 259/387 (66.93%), Postives = 314/387 (81.14%), Query Frame = 0 Query: 84 DPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLD-GETTGDVYLVYARTGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKR 470 D FNPT+ H QLR M+R FV+ EV+PQAL +NR E+FNL L ++LG+LGLLGLTV EYGG G+DA A A+VHEE+S +DPAFCL+YLAHSLL VNN++ NG+S QK ++LP A SGE +GGM MSEP GTDVLGM T AV + + L G KMWITNGTLD G+T GD++LVYARTG G D++ F+VEK GF +GQK+ DKLGMRAS T+ELVFD+ +P EN++G +GA +CMMRNLEIER+GLAAM++G+ARRC+ VM YA ERKAFG+ L EFGQ+Q +A SYAEYMAGR Y+Y AN+L+L S GNGLDADG KLYCA+M K +ADR+IQVLGGYGYVGEY VERLWRD+KLLEIGGGT+E+HHKNMVRDL+R Sbjct: 67 DFFNPTDTHVQLRSMLRHFVQNEVEPQALEYNRSEKFNLPLLKQLGDLGLLGLTVEEEYGGYGLDATATALVHEELSYSDPAFCLSYLAHSLLLVNNISINGSSEQKQRFLPTAISGEKIGGMGMSEPNCGTDVLGMTTKAVLDESTKLWHLTGQKMWITNGTLDGGKTPGDLFLVYARTGPGRSDITSFIVEKDMVGFSVGQKINDKLGMRASPTSELVFDDVPIPSENIIGDVNGATLCMMRNLEIERLGLAAMALGIARRCINVMKDYANERKAFGKPLTEFGQIQSAIATSYAEYMAGRCYVYAFANNLNLHSHGNGLDADGTKLYCAQMAKTIADRSIQVLGGYGYVGEYGVERLWRDSKLLEIGGGTNESHHKNMVRDLRR 453
BLAST of NO01G04950 vs. NCBI_GenBank
Match: XP_002182225.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46126.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 533.5 bits (1373), Expect = 6.700e-148 Identity = 263/391 (67.26%), Postives = 315/391 (80.56%), Query Frame = 0 Query: 86 FNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGE------LGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYARTGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFG-QSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKR 470 FNPT+EH +R +R FVE+EV+PQA +N+ E FN LFRKLG LG+LGLTV EYGG G+DA AVA+ HEE+S +DPAFCLAYLAH+LL NNLA NG+ AQK ++LP C+G VVGGMCMSEP AGTDVLGM T A + G + LNG KMWITNGTLDG TTGD++LVYARTG DL+ FVVEK GF LGQK+ DKLGMRASMTAELVF++ + +++VG+ + A +CMMRNLEIER+GLAAM++G+ARR ++ M RYA ER+AFG ++L EFGQ+Q+ +AESYAEYMAGR Y+Y VAN LDL +GNGLDADG KLYCAKM KEVADRAIQV+GGYGYVGEY+VERLWRDAKLLEIGGGT+E+HHKNM RDL++ Sbjct: 40 FNPTDEHLAMRATLRTFVEREVEPQAAHYNKTETFNRDLFRKLGTVDQDHGLGVLGLTVPEEYGGLGLDATAVALTHEELSYSDPAFCLAYLAHALLLANNLAVNGSEAQKSRWLPDICAGTVVGGMCMSEPNAGTDVLGMKTNATAIEGGGGWKLNGTKMWITNGTLDGRTTGDIFLVYARTGPAKTDLTQFVVEKNMPGFSLGQKIVDKLGMRASMTAELVFEDVILSHDHVVGEVNEATLCMMRNLEIERIGLAAMALGIARRSIDEMKRYALERQAFGARNLFEFGQIQRLIAESYAEYMAGRCYVYGVANSLDLNKAGNGLDADGTKLYCAKMSKEVADRAIQVMGGYGYVGEYKVERLWRDAKLLEIGGGTNESHHKNMARDLRK 430
BLAST of NO01G04950 vs. NCBI_GenBank
Match: XP_002907203.1 (isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4] >EEY63767.1 isovaleryl-CoA dehydrogenase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 533.5 bits (1373), Expect = 6.700e-148 Identity = 270/415 (65.06%), Postives = 320/415 (77.11%), Query Frame = 0 Query: 60 LFQPLRPF-SSEPAGSSSYSTMTAFDPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYART---GKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKRH 471 LF R F ++E + + S S+ D F PTEEH LR M+ FV+ +VDPQAL +R E+FN+ LFR+LG+LGLLG+T +YGGS MDA A I HEE+S++DPAFCL++LAHS+LFVNN+A+N + AQ KYLP ACSG + GM MSEP GTDVLGM TTA KS G FY LNG KMWITNG LD GD +LVYART GK +D S F+VEKG EGF LGQ+++DK GMRAS TAELVF+ C+VPVEN+VG E A +CMMRNLEIERV LAAMS+G+ARR +EVM+ YAKER+AFGQ LN FGQ+QK++AESYAEYMAGR Y+Y A L L S GN +D DGVKLYC M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGT+E+HHKNMV+DL R+ Sbjct: 9 LFAARRSFTAAECSLARSMSSSRDLDLFTPTEEHGVLREMLTGFVKTKVDPQALEHDREEKFNVKLFRELGDLGLLGITAPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSGAKICGMAMSEPSVGTDVLGMRTTAKKSDCGKFYLLNGTKMWITNGALDDTELGDTFLVYARTGNSGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAVLCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGQPLNNFGQIQKNIAESYAEYMAGRAYVYNTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMVQDLVRN 423
BLAST of NO01G04950 vs. NCBI_GenBank
Match: XP_009517540.1 (hypothetical protein PHYSODRAFT_553331 [Phytophthora sojae] >EGZ30265.1 hypothetical protein PHYSODRAFT_553331 [Phytophthora sojae]) HSP 1 Score: 530.4 bits (1365), Expect = 5.700e-147 Identity = 263/406 (64.78%), Postives = 318/406 (78.33%), Query Frame = 0 Query: 68 SSEPAGSSSYSTMTAFDPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYAR---TGKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKRH 471 +++ A + S S+ + D F PTEEH LR M+ FV+ +V+PQAL +R E+FN+ LFR+LGELGLLG+T +YGGS MDA A I HEE+S++DPAFCL++LAHS+LFVNN+A+N + AQ KYLP ACSG + GM MSEP GTDVLGM TTA KS+ G +Y LNG KMWITNG L+ GD +LVYAR TGK +D S F+VEKG EGF LGQ+++DK GMRAS TAELVF+ C+VPVEN+VG E A +CMMRNLEIERV LAAMS+G+ARR +EVM+ YAKER+AFG+ LN FGQ+QK++AESYAEYMAGR Y+Y A L L S GN +D DGVKLYC M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGT+E+HHKNMV+DL R+ Sbjct: 18 ATDGALTRSMSSSSELDLFTPTEEHGALREMLAGFVKTKVEPQALEHDRAEKFNVKLFRELGELGLLGITAPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSGAKICGMAMSEPSVGTDVLGMRTTAKKSECGKYYVLNGTKMWITNGALNDTELGDTFLVYARTGNTGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGSEGSAVLCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGRPLNNFGQIQKNIAESYAEYMAGRAYVYNTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMVQDLVRN 423
BLAST of NO01G04950 vs. NCBI_GenBank
Match: XP_008896728.1 (hypothetical protein PPTG_05019 [Phytophthora parasitica INRA-310] >ETI34694.1 hypothetical protein F443_18866 [Phytophthora parasitica P1569] >ETN17138.1 hypothetical protein PPTG_05019 [Phytophthora parasitica INRA-310]) HSP 1 Score: 528.5 bits (1360), Expect = 2.200e-146 Identity = 270/422 (63.98%), Postives = 321/422 (76.07%), Query Frame = 0 Query: 57 LTTLFQPL----RPFSSEPAG-SSSYSTMTAFDPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYART---GKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKRH 471 L L QPL R F++ G S S S+ F PTEEH LR M+ FV+ +VDPQAL +R E+FN+ LFR+LG+LGLLG+T +YGGS MDA A I HEE+S++DPAFCL++LAHS+LFVNN+A+N + AQ KYLP ACSG + GM MSEP GTDVLGM TTA KS G +Y LNG KMWITNG L+ GD +LVYART GK +D S F+VEKG EGF LGQ+++DK GMRAS TAELVF+ C+VPVEN+VG E A +CMMRNLEIERV LAAMS+G+ARR +EVM+ YAKER+AFG+ LN FGQ+QK++AESYAEYMAGR Y+Y A L L S GN +D DGVKLYC M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGT+E+HHKNMV+DL R+ Sbjct: 2 LRQLRQPLLAARRSFTAAECGLSRSMSSSRELGLFTPTEEHGALREMLAGFVKTKVDPQALEHDREEKFNVKLFRELGDLGLLGITAPEKYGGSEMDALAAVIAHEELSSSDPAFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSGAKICGMAMSEPSVGTDVLGMRTTAKKSDCGKYYLLNGTKMWITNGALNDTELGDTFLVYARTGNSGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAVLCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGRPLNNFGQIQKNIAESYAEYMAGRAYVYNTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMVQDLVRN 423
BLAST of NO01G04950 vs. NCBI_GenBank
Match: ETL78989.1 (hypothetical protein L917_20309 [Phytophthora parasitica] >ETM32265.1 hypothetical protein L914_20313 [Phytophthora parasitica]) HSP 1 Score: 528.5 bits (1360), Expect = 2.200e-146 Identity = 270/422 (63.98%), Postives = 321/422 (76.07%), Query Frame = 0 Query: 57 LTTLFQPL----RPFSSEPAG-SSSYSTMTAFDPFNPTEEHSQLRGMIRAFVEKEVDPQALAFNRREEFNLTLFRKLGELGLLGLTVSVEYGGSGMDAAAVAIVHEEISAADPAFCLAYLAHSLLFVNNLAQNGTSAQKLKYLPKACSGEVVGGMCMSEPGAGTDVLGMNTTAVKSQDGSFYTLNGAKMWITNGTLDGETTGDVYLVYART---GKGPKDLSMFVVEKGTEGFGLGQKLEDKLGMRASMTAELVFDECRVPVENLVGKEHGAAICMMRNLEIERVGLAAMSVGLARRCVEVMNRYAKERKAFGQSLNEFGQVQKHVAESYAEYMAGRTYLYFVANHLDLASSGNGLDADGVKLYCAKMGKEVADRAIQVLGGYGYVGEYQVERLWRDAKLLEIGGGTSEAHHKNMVRDLKRH 471 L L QPL R F++ G S S S+ F PTEEH LR M+ FV+ +VDPQAL +R E+FN+ LFR+LG+LGLLG+T +YGGS MDA A I HEE+S++DPAFCL++LAHS+LFVNN+A+N + AQ KYLP ACSG + GM MSEP GTDVLGM TTA KS G +Y LNG KMWITNG L+ GD +LVYART GK +D S F+VEKG EGF LGQ+++DK GMRAS TAELVF+ C+VPVEN+VG E A +CMMRNLEIERV LAAMS+G+ARR +EVM+ YAKER+AFG+ LN FGQ+QK++AESYAEYMAGR Y+Y A L L S GN +D DGVKLYC M K VADRAIQ LGGYGYVGEY VERLWRD+KLLEIGGGT+E+HHKNMV+DL R+ Sbjct: 2 LRQLRQPLLAARRSFTAAECGLSRSMSSSRELGLFTPTEEHGALREMLAGFVKTKVDPQALEHDREEKFNVKLFRELGDLGLLGITAPEKYGGSEMDAIAAVIAHEELSSSDPAFCLSFLAHSMLFVNNVARNASDAQCQKYLPDACSGAKICGMAMSEPSVGTDVLGMRTTAKKSDCGKYYLLNGTKMWITNGALNDTELGDTFLVYARTGNSGKAKQDFSSFLVEKGFEGFSLGQRIKDKCGMRASNTAELVFENCKVPVENIVGTEGSAVLCMMRNLEIERVTLAAMSLGIARRSLEVMSNYAKEREAFGRPLNNFGQIQKNIAESYAEYMAGRAYVYNTARKLKLDSVGNRVDTDGVKLYCGDMAKRVADRAIQTLGGYGYVGEYNVERLWRDSKLLEIGGGTNESHHKNMVQDLVRN 423 The following BLAST results are available for this feature:
BLAST of NO01G04950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04950 ID=NO01G04950|Name=NO01G04950|organism=Nannochloropsis oceanica|type=gene|length=4041bpback to top protein sequence of NO01G04950.1 >NO01G04950.1-protein ID=NO01G04950.1-protein|Name=NO01G04950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bpback to top Synonyms
Publications
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