NO01G04900, NO01G04900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04900 vs. NCBI_GenBank
Match: EWM29403.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 283.1 bits (723), Expect = 8.300e-73 Identity = 139/190 (73.16%), Postives = 157/190 (82.63%), Query Frame = 0 Query: 63 SHSRSWITFKRGGATSNNT---EALLLPTPAFAAAEDIWNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 S S WI +RGGA +++ E LLLPTPAF AAE+ W TPQG+ WTQLLLDSFEK TGS LL +R+ LD EQARALF SSRV+VSHQTQ+DPVLCYGN KALALWEMDL LTSSPSR TAEPVAREERQRLLD V++KG+IDDY GVRISSTG RFEI++A+VWE+YD GVRRGQAATFS+W L Sbjct: 52 SQSCPWIITQRGGAVNHDNDTREGLLLPTPAFKAAEETWKTPQGVQWTQLLLDSFEKTTGSFLLSNRDTLDAAEQARALFFSSRVIVSHQTQQDPVLCYGNEKALALWEMDLETLTSSPSRYTAEPVAREERQRLLDEVRSKGYIDDYRGVRISSTGSRFEIVKAIVWEVYDTLGVRRGQAATFSEWRTL 241
BLAST of NO01G04900 vs. NCBI_GenBank
Match: WP_092051623.1 (MEKHLA domain-containing protein [Planctomicrobium piriforme] >SFI68712.1 MEKHLA domain-containing protein [Planctomicrobium piriforme]) HSP 1 Score: 173.3 bits (438), Expect = 9.300e-40 Identity = 88/152 (57.89%), Postives = 105/152 (69.08%), Query Frame = 0 Query: 98 WNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 W TPQ ++ TQLLL S+ + + L+ E P+EQAR LF S V+VSH TQ DPVL YGN AL LWEMDL LTS+PSR TAEP+ R+ER RLL+ G++DDY G+RISSTGKRF I QA+VW + D G RGQAATFS W L Sbjct: 6 WQTPQCISHTQLLLKSYRRWLKTDLIPRTE--TPLEQARLLFESPFVIVSHGTQPDPVLNYGNQTALMLWEMDLPTLTSTPSRYTAEPLHRDERARLLERTTRDGYVDDYSGIRISSTGKRFRIAQAIVWNLVDDAGEYRGQAATFSSWEPL 155
BLAST of NO01G04900 vs. NCBI_GenBank
Match: WP_073601244.1 (MEKHLA domain-containing protein [Hydrococcus rivularis] >OKH20153.1 MEKHLA domain-containing protein [Hydrococcus rivularis NIES-593]) HSP 1 Score: 167.5 bits (423), Expect = 5.100e-38 Identity = 79/156 (50.64%), Postives = 109/156 (69.87%), Query Frame = 0 Query: 94 AEDIWNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 ++D+W P+ ++W+Q+LL+S+EK L++ + D +EQA+ALFL+ VVVSH T+ DP+L YGN AL LWEM + ++PSRLTAEP+ REER+R+L +GFIDDY G+RIS TG+RF I A+VW + D GQAATFS W+ L Sbjct: 4 SKDVWQQPEIISWSQILLNSYEKLLKKPLIERKG--DRLEQAKALFLAPFVVVSHGTESDPILNYGNQMALTLWEMSWQDFIATPSRLTAEPINREERERMLALAAQQGFIDDYRGIRISKTGRRFLIEGAIVWNLTDFQNCVAGQAATFSQWSFL 157
BLAST of NO01G04900 vs. NCBI_GenBank
Match: SEM72824.1 (MEKHLA domain-containing protein [Nitrosomonas marina]) HSP 1 Score: 164.1 bits (414), Expect = 5.600e-37 Identity = 84/152 (55.26%), Postives = 100/152 (65.79%), Query Frame = 0 Query: 98 WNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 W +PQ L W Q LLDS+ TG L+ + EQA LF S VVVSHQ +EDP+L YGN AL LWEMD T +PSR+TAEPV REER R+L + G+I DY GVRISSTGKRF + QA+VW I + DG+ GQ ATFS W+ L Sbjct: 7 WKSPQMLRWCQYLLDSYAYWTGKELIPRKG--TTYEQASYLFNCSFVVVSHQAREDPILNYGNQTALNLWEMDWCQFTKTPSRMTAEPVNREERARVLQQARTHGYIADYRGVRISSTGKRFLVDQAIVWNILNSDGITIGQGATFSIWHFL 156
BLAST of NO01G04900 vs. NCBI_GenBank
Match: WP_090627197.1 (MEKHLA domain-containing protein [Nitrosomonas marina]) HSP 1 Score: 164.1 bits (414), Expect = 5.600e-37 Identity = 84/152 (55.26%), Postives = 100/152 (65.79%), Query Frame = 0 Query: 98 WNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 W +PQ L W Q LLDS+ TG L+ + EQA LF S VVVSHQ +EDP+L YGN AL LWEMD T +PSR+TAEPV REER R+L + G+I DY GVRISSTGKRF + QA+VW I + DG+ GQ ATFS W+ L Sbjct: 11 WKSPQMLRWCQYLLDSYAYWTGKELIPRKG--TTYEQASYLFNCSFVVVSHQAREDPILNYGNQTALNLWEMDWCQFTKTPSRMTAEPVNREERARVLQQARTHGYIADYRGVRISSTGKRFLVDQAIVWNILNSDGITIGQGATFSIWHFL 160
BLAST of NO01G04900 vs. NCBI_GenBank
Match: WP_006529571.1 (MEKHLA domain-containing protein [Gloeocapsa sp. PCC 73106] >ELR97590.1 MEKHLA domain-containing protein [Gloeocapsa sp. PCC 73106]) HSP 1 Score: 162.5 bits (410), Expect = 1.600e-36 Identity = 80/155 (51.61%), Postives = 102/155 (65.81%), Query Frame = 0 Query: 95 EDIWNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 E IW PQ + W+Q LL+S+EK G L+ DP+ +A LF + V+VSH + DP+L YGN AL LWEMD T +PSR TAEPV +EERQR+L +GFID++ GVRIS TGKRF + +A++W I D +G GQAATFSDW L Sbjct: 3 EVIWKQPQVIQWSQCLLNSYEKYLGKELIV--RNGDPVAEAEFLFYAPFVLVSHNSDTDPILNYGNQVALELWEMDWEEFTQTPSRYTAEPVNQEERQRMLSLATQQGFIDNFQGVRISRTGKRFVLEKAIIWNIVDTEGQACGQAATFSDWKML 155
BLAST of NO01G04900 vs. NCBI_GenBank
Match: PLY22062.1 (MEKHLA domain-containing protein [Nitrospira sp. CG24E]) HSP 1 Score: 162.5 bits (410), Expect = 1.600e-36 Identity = 82/176 (46.59%), Postives = 111/176 (63.07%), Query Frame = 0 Query: 77 TSNNTEALLLP---TPAFAAAEDIWNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 T ++T A + P T F IW P + W+QLLL+S+ G LL+ DP QA ALFLS +VVSH +EDP++ YGN AL LWEM +LT +PSRLTAEPV R ER+ +L+ + +G++D Y GVR++STG+RF + A++W + D +G R GQAATF W L Sbjct: 7 TDSSTSASVHPFSDTKGFIVTPQIWTNPTVVDWSQLLLNSYSHWIGRELLE--RAGDPAYQAHALFLSPFIVVSHGMEEDPLINYGNQAALELWEMTWEDLTRTPSRLTAEPVNRAEREWMLEQARTRGYLDTYQGVRVTSTGRRFLVENAIIWNVVDAEGQRVGQAATFMHWTWL 180
BLAST of NO01G04900 vs. NCBI_GenBank
Match: WP_015143746.1 (MEKHLA domain-containing protein [Pleurocapsa minor] >AFY77442.1 MEKHLA domain-containing protein [Pleurocapsa sp. PCC 7327]) HSP 1 Score: 161.8 bits (408), Expect = 2.800e-36 Identity = 77/156 (49.36%), Postives = 108/156 (69.23%), Query Frame = 0 Query: 94 AEDIWNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 ++D+W P+ ++W+Q+LL+S+EK L++ + D +EQA+ALFL+ VVVSH T+ DP+L YGN AL LWE + ++PSRLTAEP+ REER+R+L +GFI+DY G+RIS TG+RF I A+VW + D GQAATFS W+ L Sbjct: 4 SKDVWQQPEIISWSQILLNSYEKLLKKPLMERKG--DRLEQAKALFLAPFVVVSHGTESDPILNYGNQMALTLWETSWQDFIATPSRLTAEPIDREERERMLALAAQQGFINDYRGIRISKTGRRFLIGGAIVWNLTDFQNRVLGQAATFSQWSFL 157
BLAST of NO01G04900 vs. NCBI_GenBank
Match: WP_090657965.1 (MEKHLA domain-containing protein [Nitrosomonas marina] >SET08875.1 MEKHLA domain-containing protein [Nitrosomonas marina]) HSP 1 Score: 160.6 bits (405), Expect = 6.200e-36 Identity = 89/157 (56.69%), Postives = 101/157 (64.33%), Query Frame = 0 Query: 98 WNTPQGLAWTQLLLDSFEKCTGSALLQDREELDP-----MEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 W +PQ L W Q LLDS+ T R+EL P EQA LF S VVVSHQT+EDPVL YGN AL LWEMD T +PSR+TAEPV REER R+L + +G+I DY GVRISSTGKRF + QAVVW I + DG GQ ATFS W L Sbjct: 7 WKSPQMLRWCQYLLDSYAYWT-------RQELIPRKGTTYEQASYLFNCSFVVVSHQTREDPVLNYGNQAALNLWEMDWRQFTRTPSRMTAEPVNREERARVLQQARTQGYIADYRGVRISSTGKRFLVDQAVVWNILNPDGNTIGQGATFSVWRFL 156
BLAST of NO01G04900 vs. NCBI_GenBank
Match: OGW69605.1 (MEKHLA domain-containing protein [Nitrospirae bacterium RIFCSPLOWO2_01_FULL_62_17]) HSP 1 Score: 159.5 bits (402), Expect = 1.400e-35 Identity = 80/152 (52.63%), Postives = 102/152 (67.11%), Query Frame = 0 Query: 98 WNTPQGLAWTQLLLDSFEKCTGSALLQDREELDPMEQARALFLSSRVVVSHQTQEDPVLCYGNAKALALWEMDLLNLTSSPSRLTAEPVAREERQRLLDTVKAKGFIDDYHGVRISSTGKRFEILQAVVWEIYDLDGVRRGQAATFSDWNEL 250 W P + W+QLLL SF + G L++ + P EQA+AL+L+ VVVSH + DP+L YGN AL LWE+D LT +PSRLTAEP+ + ER R+L + KGFIDDY GVRIS TGKRF + QA+VW + +G + GQAATFS W L Sbjct: 9 WADPAVIQWSQLLLGSFRRWLGRDLIERKG--SPEEQAKALYLAPVVVVSHGMEADPILNYGNKIALDLWELDWEKLTKTPSRLTAEPMNQAERARMLTQAQEKGFIDDYKGVRISGTGKRFLVEQAIVWNVVGTEGEQIGQAATFSRWTFL 158 The following BLAST results are available for this feature:
BLAST of NO01G04900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04900 ID=NO01G04900|Name=NO01G04900|organism=Nannochloropsis oceanica|type=gene|length=2857bpback to top protein sequence of NO01G04900.1 >NO01G04900.1-protein ID=NO01G04900.1-protein|Name=NO01G04900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=250bpback to top Synonyms
Publications
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