NO01G04880, NO01G04880 (gene) Nannochloropsis oceanica

Overview
NameNO01G04880
Unique NameNO01G04880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2512
Alignment locationchr1:1289986..1292497 -

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Properties
Property NameValue
DescriptionAureochrome1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1289986..1292497 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000155phosphorelay sensor kinase activity
GO:0003700DNA-binding transcription factor activity
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR035965PAS-like_dom_sf
IPR000700PAS-assoc_C
IPR000014PAS
IPR004827bZIP
Homology
BLAST of NO01G04880 vs. NCBI_GenBank
Match: EWM29406.1 (aureochrome1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 453.4 bits (1165), Expect = 9.000e-124
Identity = 311/484 (64.26%), Postives = 334/484 (69.01%), Query Frame = 0
Query:    1 MSPTTMQSQSTVTPAISGPEPTSWGIFSRSNSNVNLAGEAGGSDPALLVKQEDTLAPGPTWTAPLYASANGNNYVSGDMVDLNEIFAGDFLLPGVG-VSCSDEEMFGAEDMFPEENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEEE 484
            MS TTMQ Q+    AI   +PTSWGI SR+NS+ +LAGEAGG +    +KQE   A  P WTAPLYASAN +N ++ D VDL+EIFA DFLLPG+G V    E   G EDMFP                                                                                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERR     HAKRSRMRKKFMLESLQAQMLALRKENLRLRQLV+TK+P+KAD ILRGCSSIKTQ +LSSVELGHHRALAD+DG+L+SALQFAQQNFTVSDPSLPDNPI+YASQGFLDLTGY+SDQ+VGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRD EGNIVN+VGVQCKVEEAPMEEELKERVKTINFDEEE
Sbjct:    1 MSTTTMQQQAPTMAAIQ--QPTSWGILSRNNSSTDLAGEAGGLEAPDQIKQE---AAAPLWTAPLYASANNSNPMA-DTVDLDEIFADDFLLPGMGMVPFGTEGDMGPEDMFP-GGLSCDTSVATNDNDDSAVASGMHGKGKGAQFANAAPQGKTEDKTNVRAAAVVRSAASRTRSGITTRLGLNKGQGRAVTGASSMLPSAVPSRARVPTRKGSLPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRXXXXXHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVATKLPDKADTILRGCSSIKTQNLLSSVELGHHRALADHDGRLVSALQFAQQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVGVQCKVEEAPMEEELKERVKTINFDEEE 477          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AHB33796.1 (aureochrome 1 [Nannochloropsis gaditana])

HSP 1 Score: 445.7 bits (1145), Expect = 1.900e-121
Identity = 302/465 (64.95%), Postives = 324/465 (69.68%), Query Frame = 0
Query:   20 EPTSWGIFSRSNSNVNLAGEAGGSDPALLVKQEDTLAPGPTWTAPLYASANGNNYVSGDMVDLNEIFAGDFLLPGVG-VSCSDEEMFGAEDMFPEENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEEE 484
            +PTSWGI SR+NS+ +LAGEAGG +    +KQE   A  P WTAPLYASAN +N ++ D VDL+EIFA DFLLPG+G V    E   G EDMFP                                                                                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERR     HAKRSRMRKKFMLESLQAQMLALRKENLRLRQLV+TK+P+KAD ILRGCSSIKTQ +LSSVELGHHRALAD+DG+L+SALQFAQQNFTVSDPSLPDNPI+YASQGFLDLTGY+SDQ+VGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRD EGNIVN+VGVQCKVEEAPMEEELKERVKTINFDEEE
Sbjct:    6 QPTSWGILSRNNSSTDLAGEAGGLEAPDQIKQE---AAAPLWTAPLYASANNSNPMA-DTVDLDEIFADDFLLPGMGMVPFGTEGDMGPEDMFP-GGLSCDTSVATNDNDDSAVASGMHGKGKGAQFANAAPQGETEDKTNVRAAAVVRSAASRTRSGITTRLGLNKGQGRAVTGASSMLPSAVPSRARVPTRKGSLPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRXXXXXHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVATKLPDKADTILRGCSSIKTQNLLSSVELGHHRALADHDGRLVSALQFAQQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVGVQCKVEEAPMEEELKERVKTINFDEEE 465          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: API61832.1 (aureochrome3 [Heterosigma akashiwo])

HSP 1 Score: 265.8 bits (678), Expect = 2.700e-67
Identity = 139/226 (61.50%), Postives = 171/226 (75.66%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHH--RALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483
            LTE QR+ERRERNREHAKRSR+RK+FMLESLQ Q + L++EN+ LRQ++  KIP +AD I   C+  K   ++S+    +   R L + D +L+ +L  +QQNFTVSDPSLPDNPIVYASQGFLDLTGY  DQ++GRNCRFLQGPGTD  AV+IIR+GV  G D SVCLLNY+ADGTPFWNQFFVA LRD+   IVN VGVQC+V E    + L++ +K +   EE
Sbjct:  106 LTEEQRLERRERNREHAKRSRIRKRFMLESLQEQFMGLQRENMALRQIIKDKIPARADSIFEKCTD-KISDLISTPVKDYQALRFLIEPDFRLVESLTTSQQNFTVSDPSLPDNPIVYASQGFLDLTGYRMDQILGRNCRFLQGPGTDRKAVEIIRKGVQEGRDMSVCLLNYKADGTPFWNQFFVAPLRDANDQIVNFVGVQCEVREM-SSDRLRDTLKKMPLPEE 329          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML77740.1 (putative LOV domain-containing protein [Sargassum fusiforme])

HSP 1 Score: 265.4 bits (677), Expect = 3.500e-67
Identity = 140/239 (58.58%), Postives = 176/239 (73.64%), Query Frame = 0
Query:  259 LTEAQRVERR-ERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAM----------LSSVELGHHR----ALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483
            ++E Q++ERR ERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V   +P++A  +   C++ K   +          + S E    +     L + D +L+ AL  +QQNFT+SDPS+PDNPIVYASQGFL+LTGY    V+GRNCRFLQGPGTDP A+DI+RRGVA G DTSVCLLNY+ADGTPFWNQFFVAALRD  G IVN+VGVQC+V+E   + E +ER++ I   EE
Sbjct:   22 MSEQQKLERRQERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAAKVFEKCTNEKALVLSGKNTESAQPIQSDEEDETKEPNCLLLEPDFQLMRALMESQQNFTISDPSMPDNPIVYASQGFLNLTGYCIQNVIGRNCRFLQGPGTDPRAIDIVRRGVAEGRDTSVCLLNYKADGTPFWNQFFVAALRDDTGKIVNYVGVQCEVQEEAEDGEFRERLRKIPLPEE 260          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: CBJ30909.1 (aureochrome 4 [Ectocarpus siliculosus])

HSP 1 Score: 263.8 bits (673), Expect = 1.000e-66
Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGC-----------SSIKTQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483
            ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V   +P++A  +   C           S+   Q +LS  E      +  L + D +L+ AL  +QQNFT+SDPS+PDNPIVYASQGFL LTGY+   V+GRNCRFLQGPGTDP A+DIIRRGVA G DTSVCL+NY+ADGTPFWNQFFVAALRD  G IVN VGVQ +V E   + + +ER++ I   +E
Sbjct:   35 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEASTVFEKCINEKALVLSGKSTESAQPILSDDEEETKEPNCLLLEPDFQLMQALMTSQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVHEEAQDRDFRERLRKIPLPDE 272          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML76384.1 (putative LOV domain-containing protein [Punctaria latifolia])

HSP 1 Score: 263.1 bits (671), Expect = 1.700e-66
Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGC-----------SSIKTQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483
            ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V   +P++A  +   C           S+   Q +LS  E      +  L + D +L+ AL  +QQNFT+SDPS+PDNPIVYASQGFL LTGY+   V+GRNCRFLQGPGTDP A+DIIRRGV  G DTSVCL+NY+ADGTPFWNQFFVAALRD  G IVN VGVQ +V+E   + E +ER++ I   +E
Sbjct:  155 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAATVFEKCINEKALVLSGKSTESAQPILSDDEDETKEPNCLLLEPDFQLMQALMASQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVLEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDE 392          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML79043.1 (putative LOV domain-containing protein [Petalonia fascia])

HSP 1 Score: 261.9 bits (668), Expect = 3.900e-66
Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIK-----------TQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483
            ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V   +P++A  +   C + K            Q +LS  E      +  L + D +L+ AL  +QQNFT+SDPS+PDNPIVYASQGFL LTGY+   V+GRNCRFLQGPGTDP A+DIIRRGVA G DTSVCL+NY+ADGTPFWNQFFVAALRD  G IVN VGVQ +V+E   + +  ER++ I   +E
Sbjct:  159 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAAAVFEKCINEKALVLSGKGTGSAQPILSDDEDETKEPNCLLLEPDFQLMQALMASQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEGQDRDFHERLRKIPLPDE 396          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML78387.1 (putative LOV domain-containing protein [Colpomenia sinuosa])

HSP 1 Score: 261.2 bits (666), Expect = 6.600e-66
Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIK-----------TQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483
            ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V   +P++A  +   C + K            Q +LS  E      +  L + D +L+ AL  +QQNFT+SDPS+PDNPIVYASQGFL LTGY+   V+GRNCRFLQGPGTDP A+DIIRRGVA G DTSVCL+NY+ADGTPFWNQFFVAALRD  G IVN VGVQ +V+E   + +  ER++ I   +E
Sbjct:    1 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAAAVFEKCINEKALVLSGKGTGSAQPILSDDEEETKEPNCLLLEPDFQLMQALMASQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEGHDRDFHERLRKIPLPDE 238          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: EJK75561.1 (hypothetical protein THAOC_02710 [Thalassiosira oceanica])

HSP 1 Score: 258.5 bits (659), Expect = 4.300e-65
Identity = 134/225 (59.56%), Postives = 170/225 (75.56%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGC-------SSIKTQAMLSSVEL----GHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKE 473
            LTE+Q+ ERRERNREHAKRSR+RKKF+LESLQ Q+  L+ E   L+ ++  ++P++A  +L+         S+   +   + + +    G  + L + D +L+SAL  +QQNF +SDPSLPDNPIVY SQGFLDLTGYS DQV+GRNCRFLQGPGTD AAVD+IRRGV  G DTSVCLLNY+ADGTPFWNQFFVAALRD+E N+VN VGVQC+V +A +E+ + E
Sbjct:  174 LTESQKTERRERNREHAKRSRLRKKFLLESLQEQIDGLQGEISTLKSIIKRELPDRAAALLKDIGDSDEADSAAPNKGSFTPLPMPSGFGPVKTLMEPDYRLMSALSGSQQNFAISDPSLPDNPIVYVSQGFLDLTGYSLDQVLGRNCRFLQGPGTDQAAVDVIRRGVMEGTDTSVCLLNYKADGTPFWNQFFVAALRDAENNVVNFVGVQCEVSKAVVEKHISE 398          
BLAST of NO01G04880 vs. NCBI_GenBank
Match: XP_005854445.1 (hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526] >EKU21911.1 hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526] >EWM26768.1 aureochrome1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 257.7 bits (657), Expect = 7.300e-65
Identity = 132/214 (61.68%), Postives = 163/214 (76.17%), Query Frame = 0
Query:  259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKE 473
            +TE Q+VERRERNREHAKRSR+RKKF+LESLQ  + AL++EN +LR  + + + E AD +L+ C     +++L+S      + L D D  L+ ALQ AQQNF ++DP+LPDNPIVYAS GFL LTGY  DQ++GRNCRFLQGP TDPAAVD IRR +  G D SVCLLNYRADG+ FWNQFF+AALR ++GNIVN+VGVQCKV E    E LK+
Sbjct:    1 MTEEQKVERRERNREHAKRSRVRKKFLLESLQKSVNALQEENDKLRGAIRSHLKEGADDLLKTCEVEVDESILASDPCSATKILDDPDYTLVKALQTAQQNFVITDPTLPDNPIVYASGGFLSLTGYQMDQILGRNCRFLQGPDTDPAAVDKIRRAIEDGTDGSVCLLNYRADGSTFWNQFFIAALRGADGNIVNYVGVQCKVSEEYASEVLKK 214          
The following BLAST results are available for this feature:
BLAST of NO01G04880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29406.19.000e-12464.26aureochrome1-like protein [Nannochloropsis gaditan... [more]
AHB33796.11.900e-12164.95aureochrome 1 [Nannochloropsis gaditana][more]
API61832.12.700e-6761.50aureochrome3 [Heterosigma akashiwo][more]
AML77740.13.500e-6758.58putative LOV domain-containing protein [Sargassum ... [more]
CBJ30909.11.000e-6658.40aureochrome 4 [Ectocarpus siliculosus][more]
AML76384.11.700e-6658.40putative LOV domain-containing protein [Punctaria ... [more]
AML79043.13.900e-6658.40putative LOV domain-containing protein [Petalonia ... [more]
AML78387.16.600e-6658.40putative LOV domain-containing protein [Colpomenia... [more]
EJK75561.14.300e-6559.56hypothetical protein THAOC_02710 [Thalassiosira oc... [more]
XP_005854445.17.300e-6561.68hypothetical protein NGA_0015702 [Nannochloropsis ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR090ngnoR090Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04880.1NO01G04880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622551gene_513Nannochloropsis oceanica (N. oceanica CCMP1779)gene
AUR4gene1210Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04880.1NO01G04880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04880 ID=NO01G04880|Name=NO01G04880|organism=Nannochloropsis oceanica|type=gene|length=2512bp
ACAGCACACAACAACTACGCATACCCCTGTCTTTGTTTTTCCCCCTGCTC
GAAGATCGTTGACGATCCAAGCAGGGGCAAGCACGCACGCGTCGCCTACG
TCCTACTACCATTGGAACTCATCCGCGGCGTCAGTAAATGTCACCCACGA
CCATGCAGTCGCAGTCAACAGTCACGCCTGCCATCTCTGGGCCCGAGCCC
ACGAGCTGGGGCATTTTTTCCCGCAGTAATAGCAACGTTAATTTGGCTGG
AGAAGCAGGCGGGAGCGACCCGGCTCTCCTTGTGAAGCAAGAGGACACGT
TGGCACCTGGGCCCACCTGGACTGCCCCTCTCTACGCCTCGGCCAATGGC
AACAATTATGTGTCAGGGGACATGGTCGACCTCAATGAGATCTTCGCCGg
tacgtacgtacgagagtgggatgacgggctcggttttgcggaggtgagca
agggagggggcagaggtgtcacgtccctccctcgcttcaatgccgtcaca
aggacgtcagcgtgccatttcattgtagggaaaatgaaaggaaaaatcga
agcatttcaaatcaattcccactttccccttcctctcatccatacttccc
tcctttttcacacagGCGATTTCCTTCTGCCTGGCGTGGGCGTTTCCTGC
AGTGACGAAGAGATGTTTGGGGCCGAGGACATGTTTCCCGAAGAAAATGA
CAATGACGGCTCCACCGCCACAGGAAGAGAAGTGCGCGGCAAGGGTAAAG
GACAGAAGATAGTATTCAGGCAAACAGTTGCAGCAGCAGCAGCTGAGGAG
AAGGGAGATGGTCAAGCAGCGGCAACGGTCCGGCAGGCCGCCACTAGGAC
GAGGAGTGGGATCACGACACGCTTAGGAGGAGGGAGGGGGGAGGGTCAAA
TCAAGGCCGCGGCGATGTTGCCCTCCGCCGCTCCAGCTCGTGCCACAGCT
TCGCACTCTCGTCGTACCAAGCCTCTGACAAAGAAGCAGCAGCAGCAGCA
GGCAGCGGCGGCAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAGTACGAGA
CGGGAAGCGAAGACGAGGAAGGGGGGGATGGGTCGGGAAGGGGGAGACGG
AAGAAAGCTAAGCTGACATTGAAGCCCTTGACGGAGGCCCAGCGCGTGGA
ACGAAGGGAGCGGAACCGAGAGCACGCCAAGCGGTCCCGTATGCGCAAGA
AGTTCATGCTTGAATCCTTGCAAGCCCAAATGCTTGCCTTGCGGAAGGAA
AACCTCCGCCTCCGCCAGCTGGTGTCCACCAAAATCCCCGAAAAAGCCGA
CCACATTCTCCGGGGCTGCTCCTCAATCAAGACCCAAGCCATGCTCTCCT
CAGTCGAGCTCGGGCACCATCGTGCACTTGCCGACAACGACGGGAAACTC
ATCTCAGCCCTGCAATTTGCGCAGCAGAATTTCACTGTATCCGACCCCTC
CCTGCCTGATAATCgtaagtcctctctccctcccttcctcgctccatttc
tttcctccctccttcccccaccacccataaccatgcactcacatttctat
ctctccttccctccctccctccttctctcccgaacagCTATCGTCTACGC
CTCCCAGGGTTTCCTCGACCTGACCGGGTACTCATCAGATCAGGTCGTGG
GCCGCAACTGCCGCTTCCTGCAAGGGCCAGGCACTGACCCTGCAGCCGTA
GATATTATCAGGAGAGGGGTGGCGTTGGGGGAGGACACGAGCGTGTGTCT
GTTGAACTACAGGGCGGATGGCACGCCGTTTTGGAACCAATTCTTCGTTG
CGGCGTTGAGGGATTCGGAGGGGAATATCGTCAATCACGTGGGAGTGCAG
TGTAAGGTGGAGGAGGCGCCCATGGAGGAGGAACTGAAGGAGAGGGTCAA
GACGATTAATTTTGATGAAGAGGAATGAGAGGAAGGATAAAGAGGGGAAG
AGGAGGAGGAGGAGAAGAAGATGTAAAGTGTTTTTTACCATGTGTTTTTT
TTCCTTGTGTAATAGAATGAGATGGGAAATTGGGCTGTGGTCTTTACCAG
CGCACCTCAAGTGCGTGACAAAGAACGACAAAAAAAACCAGCAGCAGCAG
CAATAGCAGCGGCAGCAACACAACTTCCCCCAAAACAGGCGCAAGACGCA
AGAAGACTACGTATCCCTAAAGCGGAAAATGAGGCGTCAGATAAAACGCA
ACCGCAAGCATGCGCGAAGTGTATGCGGAAAAACAAGTCGGAGAGAAATA
GTACGTGTGTTGGAAAAATGAAGCGGCAGAGTAGTGGGGAGAAAGAGAAA
CGCCGTATCAAGACAAGAATTAGCTGGGTGGCATTGTGTCATTCATTCAC
ACGAAGACATGTCAGGAAGAAAGCCCGGGCACGCATCAGCCAGAGACAAA
AAATCGACATGAGAAGGAGTTGAGAGCTAGGCTGCCCCAATCTACGGTGC
GGCACGGATCTAATGATAAAAAAGAGGAATAAGGAAAGAAAAAAATCCAA
TACGTTTAGACA
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protein sequence of NO01G04880.1

>NO01G04880.1-protein ID=NO01G04880.1-protein|Name=NO01G04880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=484bp
MSPTTMQSQSTVTPAISGPEPTSWGIFSRSNSNVNLAGEAGGSDPALLVK
QEDTLAPGPTWTAPLYASANGNNYVSGDMVDLNEIFAGDFLLPGVGVSCS
DEEMFGAEDMFPEENDNDGSTATGREVRGKGKGQKIVFRQTVAAAAAEEK
GDGQAAATVRQAATRTRSGITTRLGGGRGEGQIKAAAMLPSAAPARATAS
HSRRTKPLTKKQQQQQAAAAEEEEEEEEEEYETGSEDEEGGDGSGRGRRK
KAKLTLKPLTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKEN
LRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLI
SALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQG
PGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGN
IVNHVGVQCKVEEAPMEEELKERVKTINFDEEE*
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Synonyms
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