NO01G04880, NO01G04880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04880 vs. NCBI_GenBank
Match: EWM29406.1 (aureochrome1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 453.4 bits (1165), Expect = 9.000e-124 Identity = 311/484 (64.26%), Postives = 334/484 (69.01%), Query Frame = 0 Query: 1 MSPTTMQSQSTVTPAISGPEPTSWGIFSRSNSNVNLAGEAGGSDPALLVKQEDTLAPGPTWTAPLYASANGNNYVSGDMVDLNEIFAGDFLLPGVG-VSCSDEEMFGAEDMFPEENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEEE 484 MS TTMQ Q+ AI +PTSWGI SR+NS+ +LAGEAGG + +KQE A P WTAPLYASAN +N ++ D VDL+EIFA DFLLPG+G V E G EDMFP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERR HAKRSRMRKKFMLESLQAQMLALRKENLRLRQLV+TK+P+KAD ILRGCSSIKTQ +LSSVELGHHRALAD+DG+L+SALQFAQQNFTVSDPSLPDNPI+YASQGFLDLTGY+SDQ+VGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRD EGNIVN+VGVQCKVEEAPMEEELKERVKTINFDEEE Sbjct: 1 MSTTTMQQQAPTMAAIQ--QPTSWGILSRNNSSTDLAGEAGGLEAPDQIKQE---AAAPLWTAPLYASANNSNPMA-DTVDLDEIFADDFLLPGMGMVPFGTEGDMGPEDMFP-GGLSCDTSVATNDNDDSAVASGMHGKGKGAQFANAAPQGKTEDKTNVRAAAVVRSAASRTRSGITTRLGLNKGQGRAVTGASSMLPSAVPSRARVPTRKGSLPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRXXXXXHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVATKLPDKADTILRGCSSIKTQNLLSSVELGHHRALADHDGRLVSALQFAQQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVGVQCKVEEAPMEEELKERVKTINFDEEE 477
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AHB33796.1 (aureochrome 1 [Nannochloropsis gaditana]) HSP 1 Score: 445.7 bits (1145), Expect = 1.900e-121 Identity = 302/465 (64.95%), Postives = 324/465 (69.68%), Query Frame = 0 Query: 20 EPTSWGIFSRSNSNVNLAGEAGGSDPALLVKQEDTLAPGPTWTAPLYASANGNNYVSGDMVDLNEIFAGDFLLPGVG-VSCSDEEMFGAEDMFPEENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEEE 484 +PTSWGI SR+NS+ +LAGEAGG + +KQE A P WTAPLYASAN +N ++ D VDL+EIFA DFLLPG+G V E G EDMFP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERR HAKRSRMRKKFMLESLQAQMLALRKENLRLRQLV+TK+P+KAD ILRGCSSIKTQ +LSSVELGHHRALAD+DG+L+SALQFAQQNFTVSDPSLPDNPI+YASQGFLDLTGY+SDQ+VGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRD EGNIVN+VGVQCKVEEAPMEEELKERVKTINFDEEE Sbjct: 6 QPTSWGILSRNNSSTDLAGEAGGLEAPDQIKQE---AAAPLWTAPLYASANNSNPMA-DTVDLDEIFADDFLLPGMGMVPFGTEGDMGPEDMFP-GGLSCDTSVATNDNDDSAVASGMHGKGKGAQFANAAPQGETEDKTNVRAAAVVRSAASRTRSGITTRLGLNKGQGRAVTGASSMLPSAVPSRARVPTRKGSLPVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTEAQRVERRXXXXXHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVATKLPDKADTILRGCSSIKTQNLLSSVELGHHRALADHDGRLVSALQFAQQNFTVSDPSLPDNPIIYASQGFLDLTGYTSDQIVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDMEGNIVNYVGVQCKVEEAPMEEELKERVKTINFDEEE 465
BLAST of NO01G04880 vs. NCBI_GenBank
Match: API61832.1 (aureochrome3 [Heterosigma akashiwo]) HSP 1 Score: 265.8 bits (678), Expect = 2.700e-67 Identity = 139/226 (61.50%), Postives = 171/226 (75.66%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHH--RALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483 LTE QR+ERRERNREHAKRSR+RK+FMLESLQ Q + L++EN+ LRQ++ KIP +AD I C+ K ++S+ + R L + D +L+ +L +QQNFTVSDPSLPDNPIVYASQGFLDLTGY DQ++GRNCRFLQGPGTD AV+IIR+GV G D SVCLLNY+ADGTPFWNQFFVA LRD+ IVN VGVQC+V E + L++ +K + EE Sbjct: 106 LTEEQRLERRERNREHAKRSRIRKRFMLESLQEQFMGLQRENMALRQIIKDKIPARADSIFEKCTD-KISDLISTPVKDYQALRFLIEPDFRLVESLTTSQQNFTVSDPSLPDNPIVYASQGFLDLTGYRMDQILGRNCRFLQGPGTDRKAVEIIRKGVQEGRDMSVCLLNYKADGTPFWNQFFVAPLRDANDQIVNFVGVQCEVREM-SSDRLRDTLKKMPLPEE 329
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML77740.1 (putative LOV domain-containing protein [Sargassum fusiforme]) HSP 1 Score: 265.4 bits (677), Expect = 3.500e-67 Identity = 140/239 (58.58%), Postives = 176/239 (73.64%), Query Frame = 0 Query: 259 LTEAQRVERR-ERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAM----------LSSVELGHHR----ALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483 ++E Q++ERR ERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V +P++A + C++ K + + S E + L + D +L+ AL +QQNFT+SDPS+PDNPIVYASQGFL+LTGY V+GRNCRFLQGPGTDP A+DI+RRGVA G DTSVCLLNY+ADGTPFWNQFFVAALRD G IVN+VGVQC+V+E + E +ER++ I EE Sbjct: 22 MSEQQKLERRQERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAAKVFEKCTNEKALVLSGKNTESAQPIQSDEEDETKEPNCLLLEPDFQLMRALMESQQNFTISDPSMPDNPIVYASQGFLNLTGYCIQNVIGRNCRFLQGPGTDPRAIDIVRRGVAEGRDTSVCLLNYKADGTPFWNQFFVAALRDDTGKIVNYVGVQCEVQEEAEDGEFRERLRKIPLPEE 260
BLAST of NO01G04880 vs. NCBI_GenBank
Match: CBJ30909.1 (aureochrome 4 [Ectocarpus siliculosus]) HSP 1 Score: 263.8 bits (673), Expect = 1.000e-66 Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGC-----------SSIKTQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483 ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V +P++A + C S+ Q +LS E + L + D +L+ AL +QQNFT+SDPS+PDNPIVYASQGFL LTGY+ V+GRNCRFLQGPGTDP A+DIIRRGVA G DTSVCL+NY+ADGTPFWNQFFVAALRD G IVN VGVQ +V E + + +ER++ I +E Sbjct: 35 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEASTVFEKCINEKALVLSGKSTESAQPILSDDEEETKEPNCLLLEPDFQLMQALMTSQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVHEEAQDRDFRERLRKIPLPDE 272
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML76384.1 (putative LOV domain-containing protein [Punctaria latifolia]) HSP 1 Score: 263.1 bits (671), Expect = 1.700e-66 Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGC-----------SSIKTQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483 ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V +P++A + C S+ Q +LS E + L + D +L+ AL +QQNFT+SDPS+PDNPIVYASQGFL LTGY+ V+GRNCRFLQGPGTDP A+DIIRRGV G DTSVCL+NY+ADGTPFWNQFFVAALRD G IVN VGVQ +V+E + E +ER++ I +E Sbjct: 155 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAATVFEKCINEKALVLSGKSTESAQPILSDDEDETKEPNCLLLEPDFQLMQALMASQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVLEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEAQDREFRERLRKIPLPDE 392
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML79043.1 (putative LOV domain-containing protein [Petalonia fascia]) HSP 1 Score: 261.9 bits (668), Expect = 3.900e-66 Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIK-----------TQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483 ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V +P++A + C + K Q +LS E + L + D +L+ AL +QQNFT+SDPS+PDNPIVYASQGFL LTGY+ V+GRNCRFLQGPGTDP A+DIIRRGVA G DTSVCL+NY+ADGTPFWNQFFVAALRD G IVN VGVQ +V+E + + ER++ I +E Sbjct: 159 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAAAVFEKCINEKALVLSGKGTGSAQPILSDDEDETKEPNCLLLEPDFQLMQALMASQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEGQDRDFHERLRKIPLPDE 396
BLAST of NO01G04880 vs. NCBI_GenBank
Match: AML78387.1 (putative LOV domain-containing protein [Colpomenia sinuosa]) HSP 1 Score: 261.2 bits (666), Expect = 6.600e-66 Identity = 139/238 (58.40%), Postives = 173/238 (72.69%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIK-----------TQAMLSSVE---LGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKERVKTINFDEE 483 ++E Q++ERRERNREHAKRSR+RKKFMLE LQ Q+LA+RK+NL LRQ+V +P++A + C + K Q +LS E + L + D +L+ AL +QQNFT+SDPS+PDNPIVYASQGFL LTGY+ V+GRNCRFLQGPGTDP A+DIIRRGVA G DTSVCL+NY+ADGTPFWNQFFVAALRD G IVN VGVQ +V+E + + ER++ I +E Sbjct: 1 MSEQQKLERRERNREHAKRSRIRKKFMLECLQEQLLAMRKQNLALRQVVKEHMPDEAAAVFEKCINEKALVLSGKGTGSAQPILSDDEEETKEPNCLLLEPDFQLMQALMASQQNFTISDPSMPDNPIVYASQGFLTLTGYTIQNVIGRNCRFLQGPGTDPRAIDIIRRGVAEGRDTSVCLMNYKADGTPFWNQFFVAALRDDTGKIVNFVGVQGEVQEEGHDRDFHERLRKIPLPDE 238
BLAST of NO01G04880 vs. NCBI_GenBank
Match: EJK75561.1 (hypothetical protein THAOC_02710 [Thalassiosira oceanica]) HSP 1 Score: 258.5 bits (659), Expect = 4.300e-65 Identity = 134/225 (59.56%), Postives = 170/225 (75.56%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGC-------SSIKTQAMLSSVEL----GHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKE 473 LTE+Q+ ERRERNREHAKRSR+RKKF+LESLQ Q+ L+ E L+ ++ ++P++A +L+ S+ + + + + G + L + D +L+SAL +QQNF +SDPSLPDNPIVY SQGFLDLTGYS DQV+GRNCRFLQGPGTD AAVD+IRRGV G DTSVCLLNY+ADGTPFWNQFFVAALRD+E N+VN VGVQC+V +A +E+ + E Sbjct: 174 LTESQKTERRERNREHAKRSRLRKKFLLESLQEQIDGLQGEISTLKSIIKRELPDRAAALLKDIGDSDEADSAAPNKGSFTPLPMPSGFGPVKTLMEPDYRLMSALSGSQQNFAISDPSLPDNPIVYVSQGFLDLTGYSLDQVLGRNCRFLQGPGTDQAAVDVIRRGVMEGTDTSVCLLNYKADGTPFWNQFFVAALRDAENNVVNFVGVQCEVSKAVVEKHISE 398
BLAST of NO01G04880 vs. NCBI_GenBank
Match: XP_005854445.1 (hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526] >EKU21911.1 hypothetical protein NGA_0015702 [Nannochloropsis gaditana CCMP526] >EWM26768.1 aureochrome1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 257.7 bits (657), Expect = 7.300e-65 Identity = 132/214 (61.68%), Postives = 163/214 (76.17%), Query Frame = 0 Query: 259 LTEAQRVERRERNREHAKRSRMRKKFMLESLQAQMLALRKENLRLRQLVSTKIPEKADHILRGCSSIKTQAMLSSVELGHHRALADNDGKLISALQFAQQNFTVSDPSLPDNPIVYASQGFLDLTGYSSDQVVGRNCRFLQGPGTDPAAVDIIRRGVALGEDTSVCLLNYRADGTPFWNQFFVAALRDSEGNIVNHVGVQCKVEEAPMEEELKE 473 +TE Q+VERRERNREHAKRSR+RKKF+LESLQ + AL++EN +LR + + + E AD +L+ C +++L+S + L D D L+ ALQ AQQNF ++DP+LPDNPIVYAS GFL LTGY DQ++GRNCRFLQGP TDPAAVD IRR + G D SVCLLNYRADG+ FWNQFF+AALR ++GNIVN+VGVQCKV E E LK+ Sbjct: 1 MTEEQKVERRERNREHAKRSRVRKKFLLESLQKSVNALQEENDKLRGAIRSHLKEGADDLLKTCEVEVDESILASDPCSATKILDDPDYTLVKALQTAQQNFVITDPTLPDNPIVYASGGFLSLTGYQMDQILGRNCRFLQGPDTDPAAVDKIRRAIEDGTDGSVCLLNYRADGSTFWNQFFIAALRGADGNIVNYVGVQCKVSEEYASEVLKK 214 The following BLAST results are available for this feature:
BLAST of NO01G04880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04880 ID=NO01G04880|Name=NO01G04880|organism=Nannochloropsis oceanica|type=gene|length=2512bpback to top protein sequence of NO01G04880.1 >NO01G04880.1-protein ID=NO01G04880.1-protein|Name=NO01G04880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=484bpback to top Synonyms
Publications
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