NO01G04870, NO01G04870 (gene) Nannochloropsis oceanica

Overview
NameNO01G04870
Unique NameNO01G04870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2235
Alignment locationchr1:1286875..1289109 -

Link to JBrowse

Properties
Property NameValue
DescriptionN2227-like domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1286875..1289109 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR012901N2227
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO01G04870 vs. NCBI_GenBank
Match: EWM29393.1 (N2227-like domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 397.9 bits (1021), Expect = 5.500e-107
Identity = 241/554 (43.50%), Postives = 297/554 (53.61%), Query Frame = 0
Query:   69 RQYCEDVKPPLSSVPVFFTAGVTAETQRAAYSTLKGTLEQYRSELGLRINALHNMTYVRLPGWQXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLRSKARANLTASLQARMWKEFEKIPACWQQNEDLLTLLLRFPKPTSALLPAAQGTPKQRXXXXXXXXSTSVTPT----------------SSSYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQ-RPSQQLQPCFHVTAMDISPVMIAATAAVLDVVF---------ASKTEEGEEGRGGKE--GANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGPLNYHTTLPNGAVQLTVEEIEIAAEGMGFRKIKEGEDEXXXXXXXQLEWCAYRPEPPRVGGKEGEGEGGREEGSAFLRVDVYKPVMSIFQRIKTR 595
            R +  D    L   P+F+T+G+T ETQ+AA+STLK   E YR ELG+R+ ALH+M Y  LPGW+                              + K  A++T  LQARMW+ F KIP CWQ NEDLL  LLR P P  AL    Q     R        +TS + +                S +Y DA+QIFTHLYRDWT DG+++RRKTY PIL    RLF         + G +      +ILVPGAGLGRLAF+LA+G+  P  Q +   HVTAMD+SP M+AAT AVL VV           S T  GE  R  K+  G   F+PFLHDPLLNQR+H  RF+AASFPD  A+  L                                       LALELG+FL L      +W  SQ A++TC+FLDTAPNPL+YLR +  LL+ GGYWINLGPLNYH TLP GA+QLT+EE+E  AE +G RK               LE CAYRP PP       EG    E+  AFLRVD+Y+P +S+FQ++  R
Sbjct:   99 RPFYRDEGSLLPMPPLFYTSGITVETQKAAHSTLKSVAENYRVELGIRMKALHDMVYKHLPGWEDDNQEEKEGAHGTCMNKDR-----------QPKRLADVTEDLQARMWEHFLKIPPCWQDNEDLLEDLLRLPTPVYALPSHEQVPRSYRTPCSSINLNTSFSSSPPLYSARANETHSRSPSGAYTDAMQIFTHLYRDWTQDGQDVRRKTYFPILETVNRLFSADQRLRDPSQGEI------HILVPGAGLGRLAFDLAYGEHEPKNQAR---HVTAMDMSPAMVAATWAVLGVVLDAAVGEQMGTSDTRRGESERREKDEVGGRVFHPFLHDPLLNQRTHVHRFYAASFPDKEAIQLL--------------VCCLRRRSPPLERMPGSTLFHPCSSLALELGDFLQLA--HVPAWRTSQDAVVTCFFLDTAPNPLAYLRVVDRLLRPGGYWINLGPLNYHHTLPQGALQLTLEELESVAEALGLRK--------QASTSGPLERCAYRPHPPLT----PEGFACAEQ-EAFLRVDMYQPELSVFQKVSAR 603          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: XP_002286067.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95708.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 120.9 bits (302), Expect = 1.300e-23
Identity = 108/364 (29.67%), Postives = 162/364 (44.51%), Query Frame = 0
Query:  239 YNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQ--RPSQQLQPCFHVTAMDISPVMIAATAAVL-DVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLL----------KEGGYWINLGPLNYHTTLPNGAVQLTVEEIEIAAEGMGFR-KIKEGEDEXXXXXXXQLEWCAYR-PEPPRVGGKEGEGEGGREEGSAFLRVDVYKPVMSI 588
            Y++A QI  H+ RDW+ DG ++R++T+  I+            S +  DG      +  +LVPGAG GRLAF++A  +    S++  P F V A D S VM AAT   L +++  S   E    R         YPF+ D   N+ +  RR+  +SFPD   V+QL+ H                                    L   +G+F  +  ++S +      +I+TC+FLDTA N   Y+ T+ +LL          +EGG WIN GP+ +H    N  +Q +V E++   +  GF  K  E EDE            AYR PE   +   +G G+        F R + Y+P+  I
Sbjct:  233 YDEASQIIVHIARDWSSDGAQVRQQTHSWIIDEL-----KYHHSYSNMDGSEIRSLLSPVLVPGAGAGRLAFDIALLEDLDGSKKRYP-FAVEANDNSIVMAAATYHTLNNIISLSSGNEDNVKRS-------LYPFVADSFSNEVATERRWEPSSFPDDQVVSQLKHH------------------------SSTKSVFTNSPELVYSVGDF--VTTYASPAKKGVYGSIVTCFFLDTATNIYEYIFTVRNLLRKPKSDSAEQREGGVWINFGPVQWHR---NAQLQPSVNELKDLIQLAGFEIKYWEVEDEL----------IAYRHPEDVHLASGKGSGK------PRFTRSEAYRPLKFI 538          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: GAX11469.1 (hypothetical protein FisN_22Lh155 [Fistulifera solaris])

HSP 1 Score: 114.0 bits (284), Expect = 1.600e-21
Identity = 97/368 (26.36%), Postives = 163/368 (44.29%), Query Frame = 0
Query:  174 LQARMWKEFEKIPACWQQNEDLLTLLLRFPKPTSALLPAAQGTPKQRXXXXXXXXSTSVTPTSS---SYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQ-HAIITCYFLDTAPNPLSYLRTIHSLLK-EGGYWINLGPLNYHTTLPNGAVQLTVEEIEIAAEGMGFRKIKEGED 537
            +  R+    +++   + Q++D+L   L  P  T+ +LP  + T            ST+  P+ +   SY+D  Q+  H+ RDWT +G+++RR+ Y   L   +++ +P                   ILVPGAG+GRLA+ELA  +           V A++ S  M AA A++L                 ++ +   +PF  D   N+ + + R+    +PD   V   + H                                    L+  + +F  L L+S    +QSQ  A++TC+FLDTA N L Y+  I  LLK +GG W+N+GPL +H       ++L+ +E+    E +GF+ ++ G D
Sbjct:  114 ITCRVQNRIDRLSKIFDQDQDILQRQLFVPFDTTYVLPDGEPT-----------ISTNAFPSRAVDHSYDDPHQVVAHIVRDWTAEGKQIRRQLYDWCL---SKIDKPG----------------LRILVPGAGMGRLAWELARNKHA--------WVEALESSVGMAAAAASILQ----------------RKQSGMIHPFSSDQFSNEVNSSHRYLRVQYPDVDDVEIFEGH------------------------------------LSYTVADF--LSLNSVLGNNQSQLDAVVTCFFLDTATNVLEYIAMITKLLKPKGGMWVNVGPLQWH---QKSLIRLSADELYSLIEEVGFKIMEWGVD 386          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: XP_018291735.1 (hypothetical protein PHYBLDRAFT_145171 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD73695.1 hypothetical protein PHYBLDRAFT_145171 [Phycomyces blakesleeanus NRRL 1555(-)])

HSP 1 Score: 107.8 bits (268), Expect = 1.100e-19
Identity = 82/301 (27.24%), Postives = 124/301 (41.20%), Query Frame = 0
Query:  230 TSVTPTSSSYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGPLNYH--TTLPNGAVQLTVEEIEIAAEGMGF 529
            +S  P S+  +          RDW   G+  R  TY PIL     L+  +S +   N           +LVPGAGLGRLAFE+A         +  F     + S  M+ A+  +L+   A++  E              YPF+H    N +S  ++      PD                                               ++  G+FL +    ++SW      I+TC+F+DTA N L Y+ TIH +LK+GG WIN+GPL YH   ++   +V+L++EE+    + MGF
Sbjct:   81 SSAPPVSAEMDKVRSTLKQFVRDWAVQGKPEREATYRPILDTLEALYSNTSVTARGN---------VRVLVPGAGLGRLAFEIA---------KQGFSCQGNEFSYYMLLASEFILNRSTAAEQYE-------------LYPFIHS-FSNIKSSNQQLTPIRVPDVV-----------------------------------PGDLPPNADFSMVAGDFLEVYKDDNNSWD----VIVTCFFIDTAKNILEYIETIHRILKQGGTWINIGPLLYHFEDSIDESSVELSLEELRQVVQSMGF 310          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: GAX15989.1 (hypothetical protein FisN_22Hh155 [Fistulifera solaris])

HSP 1 Score: 105.9 bits (263), Expect = 4.300e-19
Identity = 93/371 (25.07%), Postives = 162/371 (43.67%), Query Frame = 0
Query:  169 NLTASLQARMWKEFEKIPACWQQNEDLLTLLLRFPKPTSALLPAAQGTPKQRXXXXXXXXSTSVTPTSSSYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHL--PLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLK-EGGYWINLGPLNYHTTLPNGAVQLTVEEIEIAAEGMGFRKIKEGED 537
            N+T  LQ R+    +++   + Q++DLL   +  P  T+ +LP   G P           + S      SY+D  Q+  H+ RDWT +G+++RR+ Y   L                    +D   ++ I+VPGAG+GRLA+ELA  +           V A++ S  M AA A++L                 ++ +   +P+  D L N+ + ++R+    +PD   ++  Q H                                    L+  + +FL L   +++ S +      ++TC+FLDTA N L Y+  I  LL+ +GG W+N+GPL +H       ++ + +E+    E +GF+ ++ G D
Sbjct:  115 NITGRLQNRI----DRLSEIFDQDQDLLQTQVFVPFETTYVLP--DGEPAN------STNTFSSRTADHSYDDPHQVVAHIVRDWTAEGKQIRRQLYDWCL------------------SKIDKSGLR-IMVPGAGMGRLAWELARNKHA--------WVEALESSVGMAAAAASILQ----------------RKQSGMIHPYSSDQLSNEVNSSQRYLRVQYPDVDDLSTKQGH------------------------------------LSYTVADFLSLNGVVNNQSKFD----VVVTCFFLDTASNVLEYITMITKLLRPKGGMWVNVGPLQWH---QKSQIRFSADELYNIIEEVGFQIMEWGVD 387          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: OEU17639.1 (N2227-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 105.1 bits (261), Expect = 7.400e-19
Identity = 87/305 (28.52%), Postives = 132/305 (43.28%), Query Frame = 0
Query:  236 SSSYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEI------KYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQH-----AIITCYFLDTAPNPLSYLRTIHSLLK-EGGYWINLGPLNYHTTLPNGAVQLTVEEIEIAAEGMGF 529
            S SYN A QI+ HL RDWT +G+++R   Y                     D   D +EI        +LV GAG+GRLA++L+         Q  +HV A ++SP M AA +++L                  E     +P++ D + N+    RRF + SFPDT ++N +   R                                   L+  +G+F    +  +  + Q Q      A++TC+F+DTA N   YL TI  LLK E G WIN+GP+ +H    N  ++ +V+E+    E  G+
Sbjct:  241 SDSYNSATQIWAHLVRDWTTEGQKIRHVIY---------------------DWCYDQMEIYSSKSGSSVLVLGAGMGRLAYDLS---------QRGYHVEANELSPSMAAAASSIL----------------RNETKGILHPYVLDAMSNEVDSKRRFGSVSFPDT-SINGIFDVR---------------------------------GSLSYTVGSF----VGENDDYYQRQRAGHFDAVVTCFFIDTATNIYEYLDTIKKLLKPETGVWINVGPVQWHN---NAVLRPSVDELRDLIESYGW 458          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: GAO51163.1 (hypothetical protein G7K_5274-t1 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 104.0 bits (258), Expect = 1.700e-18
Identity = 81/280 (28.93%), Postives = 116/280 (41.43%), Query Frame = 0
Query:  251 RDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGPLNYH-TTLPNGAVQLTVEEIEIAAEGMGFR 530
            RDW+ +GR  R   Y PI+     LF        R            +LVPGAGL RLA+ELA         +  FH  A + S  M+  +  +L+              G   G +  +P++H    N RS    F + + PD     +LQ  R                                   L    G+F+   ++S  + +    AI TC+F+DTA N + Y+ TIH+LL  GG W+NLGPL +H      G ++LT +E+    E MGFR
Sbjct:  123 RDWSVEGRGERDACYRPIVELLESLFPDRHERNIR------------VLVPGAGLARLAWELA---------RVGFHAQANEFSYHMLLGSFYILNC-------------GVPVGHHTIHPYVHS-WSNHRSRQNHFRSVAIPDVDVAGELQHER--------------------------------AGTLEFASGDFVQ--VYSKPTETSQYDAIATCFFIDTAQNIVDYITTIHNLLLPGGKWVNLGPLLWHFENKEEGGIELTADEVRGLVEEMGFR 333          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: OQR69486.1 (UPF0586 protein C9orf41-like [Tropilaelaps mercedesae])

HSP 1 Score: 102.4 bits (254), Expect = 4.800e-18
Identity = 81/307 (26.38%), Postives = 129/307 (42.02%), Query Frame = 0
Query:  232 VTPTSSSYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGPLNYH--TTLPNGAVQLTVEEIEIAAEGMGFRKIKEGED 537
            + PT    +    +     R+W++ GR  R +++ P++R   +LF    P   RN+  V        LVPGAGLGRL FELA            F     + S  M+ A+  +L     ++ ++ E  R         YP++H    N   +A +  +   PD   VN  Q+                                      ++  GNF+ +       W     A++TC+F+DTA N + Y+ TIH  LK GGYW+NLGPL YH    L   +++ + E+I+     +GF  +++  D
Sbjct:  107 LAPTEGDMDKVRTVLKQFCREWSEVGRVEREQSFQPLIRELEKLF----PDGVRNEVQV--------LVPGAGLGRLPFELALRG---------FACQGNEYSFFMLCASCFML-----NRCKQTEMFR--------IYPYVHQ-FTNNMRNADQVRSVPIPD---VNPAQA--------------------------------GANPNFSMTAGNFVEVYSAQPDMWD----AVVTCFFIDTAQNVIEYIDTIHKCLKPGGYWLNLGPLMYHYADMLKEDSIEPSYEDIKTITREVGFDIVRDETD 339          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: EJK69179.1 (hypothetical protein THAOC_09597 [Thalassiosira oceanica])

HSP 1 Score: 101.3 bits (251), Expect = 1.100e-17
Identity = 88/297 (29.63%), Postives = 134/297 (45.12%), Query Frame = 0
Query:  238 SYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFG------QRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGPLNYHTTLPNGAVQLTVEEIEIAAEGMGF 529
            SYN A  I THL RDW+ D   +R+ TY  I+       Q  +  ++ +D    A     +LVPGAG GRLA++L F       +  S+   P F V A+D S  M  ATAA    VF  K E  +            +PF+ DP +N+ +  +R+++   P+++ ++ L+  R+ G                                L   +G+F  + L S  S   +   I TC+F+DTA N   YL TI   ++  G WINLGP+ +H    N  + L+ +E++      GF
Sbjct:  158 SYNSASHIITHLTRDWSADSAPIRKDTYGWIVD------QLWAHHISADDDGTQA----RVLVPGAGTGRLAYDLVFAAIDDSEEEKSEPHYP-FAVEAVDCSIPM--ATAAY--YVFHQKEESFK-----------MFPFVSDPFMNEVNSEKRYNSTYVPESSVIDTLK--RIGG---------------------GTQQSSVQKPHLTYVIGDF--VKLFSMPSRHDAFDYIATCFFIDTASNIFEYLLTIKHAIRPKGLWINLGPVQWHR---NAQLGLSADELKDLVRMAGF 400          
BLAST of NO01G04870 vs. NCBI_GenBank
Match: XP_016274904.1 (UPF0586 protein C9orf41-like protein [Rhodotorula toruloides NP11] >EMS23785.1 UPF0586 protein C9orf41-like protein [Rhodotorula toruloides NP11] >CDR40877.1 RHTO0S05e08262g1_1 [Rhodotorula toruloides])

HSP 1 Score: 99.0 bits (245), Expect = 5.300e-17
Identity = 84/304 (27.63%), Postives = 123/304 (40.46%), Query Frame = 0
Query:  234 PTSSSYNDAIQIFTHLYRDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILVPGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFASKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQLQSHRMKGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLALELGNFLHLPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGPLNYH--TTLPNGAVQLTVEEIEIAAEGMGFRKIKEGE 536
            PT + +           RDW++ GR  R   Y PIL +    F   SPS   N        +K +LVPGAGLGRLA+E+         ++  F   A + S  M+ A++ +L+                       +P+LH    N RS     H    PD A  N +     +                                  +   G+FL +   +  SW       +TC+FLDTA N ++YL TIH LLK GG WINLGP  +H      + +++L +E+++  A  +GF    E E
Sbjct:  117 PTDADHERLRSTLRQCVRDWSETGRNERDTAYQPILDSLTSCFAQLSPSEKAN--------VK-VLVPGAGLGRLAWEI---------VRAGFSCQANEFSLHMLIASSFILN-------------NCSTPSEFTLHPYLHS-FSNIRSREDLLHPCLIPDVAP-NDIAGGEAE---------------------------------FSFAAGDFLEVYGDAPGSWD----VCVTCFFLDTARNVVAYLETIHGLLKPGGLWINLGPTLWHFEADRDSSSLELPLEDVKALARKIGFELSDERE 350          
The following BLAST results are available for this feature:
BLAST of NO01G04870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29393.15.500e-10743.50N2227-like domain-containing protein [Nannochlorop... [more]
XP_002286067.11.300e-2329.67predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX11469.11.600e-2126.36hypothetical protein FisN_22Lh155 [Fistulifera sol... [more]
XP_018291735.11.100e-1927.24hypothetical protein PHYBLDRAFT_145171 [Phycomyces... [more]
GAX15989.14.300e-1925.07hypothetical protein FisN_22Hh155 [Fistulifera sol... [more]
OEU17639.17.400e-1928.52N2227-domain-containing protein [Fragilariopsis cy... [more]
GAO51163.11.700e-1828.93hypothetical protein G7K_5274-t1 [Saitoella compli... [more]
OQR69486.14.800e-1826.38UPF0586 protein C9orf41-like [Tropilaelaps mercede... [more]
EJK69179.11.100e-1729.63hypothetical protein THAOC_09597 [Thalassiosira oc... [more]
XP_016274904.15.300e-1727.63UPF0586 protein C9orf41-like protein [Rhodotorula ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR090ngnoR090Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04870.1NO01G04870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668524gene_512Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100042g41gene1209Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04870.1NO01G04870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04870 ID=NO01G04870|Name=NO01G04870|organism=Nannochloropsis oceanica|type=gene|length=2235bp
ACTACAGAGCAATAACCCATGTTGACTCATTCATGAGCGCTCCTACTACT
TCTATTCCCATCGTGATGCCCCACTTCACGAGCAGTGGCAGTAGCAGTGC
TGGCAGTCGTCGGACCTTGTTCCTGGTCATGCTGATGCTGGTTGTCCTCG
GTGTGCTGCTCTCCACCGCCCTCTTTGTCCTACGAACGAAGCAACAACAG
CAGCAGAGACAAGATCAGCGGCAGCAATGGGAGCATCGGCAATACTGCGA
GGACGTAAAGCCCCCCCTTTCAAGCGTGCCTGTCTTCTTCACAGCCGGGG
TCACGGCGGAGACGCAACGTGCAGCTTACTCTACTTTGAAAGGGACTTTG
GAACAATACCGGTCGGAATTAGGATTGAGAATAAATGCACTGCATAACAT
GACTTATGTGCGGCTGCCGGGATGGCAGGAAGAGGAAGATGATGGGGAGG
AGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAG
GAAAAGCATGCCGGCCTTCGGTCGAAGGCGAGAGCTAATTTGACAGCGAG
TTTGCAAGCACGAATGTGGAAAGAATTCGAGAAAATTCCTGCGTGCTGGC
AACAAAATGAGGACCTCTTAACCCTACTCCTACGTTTTCCTAAGCCGACC
TCTGCCTTGTTACCCGCGGCCCAAGGAACGCCAAAGCAACGACCTAAACA
ACGACAAAAAGAGCAATCGACATCTGTAACACCTACTAGCAGCTCATATA
ACGATGCCATCCAAATCTTTACTCACCTCTATCGAGATTGGACGGATGAC
GGCCGTGAGCTCCGCCGCAAGACCTACATGCCCATCCTCCGAGCCGCTGC
TCGTTTATTCCAACCATCCTCGCCAAGCATGGCACGGAATGATGGCATGG
TGGATGCGATAGAGATAAAGTATATTTTGGTTCCAGGCGCAGGCCTAGGT
CGTCTGGCGTTCGAGCTTGCTTTTGGTCAGCGGCCCTCGCAGCAGCTGCA
GCCGTGCTTCCATGTCACGGCTATGGATATCAGCCCTGTCATGATCGCAG
CGACGGCGGCTGTGTTAGATGTTGTATTTGCATCAAAGACGGAGGAGGGA
GAGGAGGGGAGAGGAGGGAAAGAGGGCGCAAATTTCTTTTATCCCTTTTT
GCATGATCCCCTTCTGAATCAGCGTTCGCATGCTCGTCGCTTCCACGCCG
CGTCTTTCCCCGATACGGCAGCTGTGAATCAACTTCAGTCGCATCGAATG
AAAGGAAAACAAAGACATCATGCCACGTCCTTCTTCTCCTCCTCCTCCTC
CACCTCCTCCTCCTCCTCCTCCTCCTCCTCGGCCTCCTTGCCCTCCTCTT
CCCTCGCCCTCGAACTCGGCAACTTCCTCCACCTCCCCCTCCACTCGTCC
TCCTCGTGGTCCCAATCCCAACACGCAATAATCACCTGCTATTTCCTCGA
TACAGCCCCGAACCCTCTCTCCTACCTACGCACTATTCACTCCCTCCTCA
AGGAGGGGGGGTATTGGATCAATCTCGGCCCTCTTAACTACCACACTACT
CTCCCCAACGGCGCCGTGCAACTGACGGTGGAGGAAATAGAAATAGCAGC
GGAAGGAATGGGTTTCCGGAAGATCAAGGAGGGCGAGGACGAGGACGGGG
AGGAGGAGGAGGGACAGCTGGAATGGTGTGCATATCGGCCAGAGCCTCCG
AGGGTGGGAGGGAAGGAGGGGGAGGGAGAGGGAGGGAGGGAGGAAGGATC
AGCATTTTTGCGTGTAGATGTGTACAAGCCGGTCATGAGTATATTTCAGA
GGATAAAAACGAGGTAGCGACTGCCTTACATGTGACAAGTAAATAGACAG
TGAGACAGAAGGGGAAAATATAGAAGAAATGAAAGGTTCAAGTCACAAAG
CCGAAAGTAAGAGCGACGATAATAAAATGTCTAACGAACTGTAAGGGATG
CCTCGAACGAGTAAGTCGGTCAATGTCTCCCCAGAAGGGACAAGAAATAT
ACACTTGATCCCCTCTTAGACGATTTTTTCATGTTTTCTTTTTCGTTCGT
TTTTGTTTTACTCCCTGATTTATCATTAGTAGTTTAACTACGTGTGTGTA
TGTGTGACATATCACCTGAAAATAAAGCTATCTTCTTGTCTTTATGCTGC
TTCACGAAAATATTTGTGTGAAACGCTGCAGTCGCTCACTGCATTAACAA
CACACATCCGACCTACCACAATCCCCCACCCTCCC
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protein sequence of NO01G04870.1

>NO01G04870.1-protein ID=NO01G04870.1-protein|Name=NO01G04870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=595bp
MSAPTTSIPIVMPHFTSSGSSSAGSRRTLFLVMLMLVVLGVLLSTALFVL
RTKQQQQQRQDQRQQWEHRQYCEDVKPPLSSVPVFFTAGVTAETQRAAYS
TLKGTLEQYRSELGLRINALHNMTYVRLPGWQEEEDDGEEEEEEEEEEEE
EEEEEEEKHAGLRSKARANLTASLQARMWKEFEKIPACWQQNEDLLTLLL
RFPKPTSALLPAAQGTPKQRPKQRQKEQSTSVTPTSSSYNDAIQIFTHLY
RDWTDDGRELRRKTYMPILRAAARLFQPSSPSMARNDGMVDAIEIKYILV
PGAGLGRLAFELAFGQRPSQQLQPCFHVTAMDISPVMIAATAAVLDVVFA
SKTEEGEEGRGGKEGANFFYPFLHDPLLNQRSHARRFHAASFPDTAAVNQ
LQSHRMKGKQRHHATSFFSSSSSTSSSSSSSSSASLPSSSLALELGNFLH
LPLHSSSSWSQSQHAIITCYFLDTAPNPLSYLRTIHSLLKEGGYWINLGP
LNYHTTLPNGAVQLTVEEIEIAAEGMGFRKIKEGEDEDGEEEEGQLEWCA
YRPEPPRVGGKEGEGEGGREEGSAFLRVDVYKPVMSIFQRIKTR*
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Synonyms
Publications