NO01G04860, NO01G04860 (gene) Nannochloropsis oceanica

Overview
NameNO01G04860
Unique NameNO01G04860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1700
Alignment locationchr1:1285162..1286861 +

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidyl-prolyl cis-trans isomerase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1285162..1286861 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0000413protein peptidyl-prolyl isomerization
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_domain
IPR029000Cyclophilin-like_dom
IPR002130Cyclophilin-type_PPIase_dom
Homology
BLAST of NO01G04860 vs. NCBI_GenBank
Match: EWM29410.1 (peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana])

HSP 1 Score: 701.4 bits (1809), Expect = 1.800e-198
Identity = 358/454 (78.85%), Postives = 398/454 (87.67%), Query Frame = 0
Query:    9 VLALALGPVALDAFLLPPAPLRSGAVGLMTMRAEKDTKTSSSGWHKIPKKLLAPATLAFATWQSTFSFHPALLGSTSSNLMPRLETVRSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEVRKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENLV 463
            VL   L  +  DAFL+P +PLR+ A  L+TM A KD +T  S W  +P+K+LAPATLAFATWQSTFSF P +LG+ SS++ P  ETV+S  AA   NAP+SAGSRVNKDAESLLRYGLPINSKEAR+LQEA+EGVKEN+R KRL+EGKKDV RAK+IL+SK+EKLLKAVRPDGK RA ELL E++  LDE+  TF EDAGRGSEQERAKLDLAYKQQ  ASR++TE++ELMVPAGYTV VPEEF+ LPQLQGRAEVDM +KK EAGEKFEIKGKLYD+I +KMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQ+GDP+P+GEVHGYVP G K+VR IPLEIFV QD++PMYG TTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRY C GYT ENA+LLAGVKEGDVIVSAKVVKG ENLV
Sbjct:   10 VLVSILSLIPADAFLVPASPLRAQASSLLTMEATKDPQTPGSPWINLPRKILAPATLAFATWQSTFSFQPGILGA-SSSVFPGFETVQSAHAARPSNAPSSAGSRVNKDAESLLRYGLPINSKEARELQEAVEGVKENIRGKRLNEGKKDVQRAKSILASKREKLLKAVRPDGKERAQELLKELEGNLDELTATFAEDAGRGSEQERAKLDLAYKQQLDASRAVTEVEELMVPAGYTVSVPEEFSNLPQLQGRAEVDMVLKKGEAGEKFEIKGKLYDSIQVKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQYGDPDPQGEVHGYVPFGSKDVRTIPLEIFVAQDESPMYGMTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYTCFGYTTENADLLAGVKEGDVIVSAKVVKGGENLV 462          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: CEL97061.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 398.7 bits (1023), Expect = 2.600e-107
Identity = 206/376 (54.79%), Postives = 266/376 (70.74%), Query Frame = 0
Query:   86 SNLMPRLETVRSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEVRKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENL 462
            S L+P   +  +    G  NAP++AGSRVNKDA+SLLRYGLPI  K+   LQ  +E VK ++  KR       +++A+ ++  K+  LLKA+RP  + +A ELL+ I   +D +     E A RGS QE AKLD   + Q   +  +T L  LMVP  Y V VP+EFA LPQLQGRA+V+M +KKA+ G KF+++G+LYD   + MV+DG+NAPVTAGNFVDLV KGFY++  I+RSDGFVVQ G P+   E  GYVP G KE R++PLEIFV  D+APMYG TTE+DGRG++AT LPFQAYGA+GMAR E+  +S SSQ FWLLF+SDLTPAGKN +DGRYAC GYT+  A+ L  ++ GD IVSA+VV+G + L
Sbjct:   85 SPLLPSFPSNAAKSWQGGLNAPSAAGSRVNKDADSLLRYGLPIQDKDVTALQVELEAVKGDIPVKRFDSAVNHLNKARVLIRDKEASLLKAIRPKSEDKAKELLASIGASVDPLIEAIREPASRGSPQEAAKLDKCLELQGGIADKMTALMALMVPENYKVPVPQEFASLPQLQGRAKVEMVVKKAD-GSKFDLEGRLYDEAKLVMVVDGWNAPVTAGNFVDLVSKGFYDSMKISRSDGFVVQTGKPDSGPE--GYVPTGAKEPRRVPLEIFVKGDNAPMYGETTEEDGRGFAATTLPFQAYGALGMARSEFDNNSGSSQFFWLLFDSDLTPAGKNFMDGRYACFGYTVSGADFLRDIRVGDTIVSARVVEGIDKL 457          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: CBN79757.1 (Peptidyl-prolyl cis-trans isomerase [Ectocarpus siliculosus])

HSP 1 Score: 388.7 bits (997), Expect = 2.600e-104
Identity = 207/369 (56.10%), Postives = 260/369 (70.46%), Query Frame = 0
Query:   97 SVQAAGR-QNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVK----VPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEVRKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAEN 461
            S  AA + Q + T++GSRVNKD  SLL++GLPI+ K AR LQE +E  K ++  K  S    + S+AK+ +S  K  +LKAV    +A AT+L+++ID  L  +     +D G G   E+AKLD AY   A    ++  L+ +MVP  YT K    +P +F  LP+L GRA V+  M+K + GEKF++ G LYD + + MV+DGF APVTAG  +DLVQ+G+Y N PITRSDGFVVQ GDP+PEG VH + PPG    RKIPLEI VT+D  PMY  TTEDDGRGY+AT+LPFQAYGA+GMAR E+ ADSAS Q FWLLF+SDLTPAGKNLLDGRYA  GYT++N ELLA VKEGD+I SAKV+ G EN
Sbjct:   85 SANAANKLQVSSTASGSRVNKDPISLLQWGLPIDCKPARQLQEVVEAAKLDLFQKNWSRAVSNCSKAKSAMSGNKAAILKAVGSSNEAGATKLMADIDMGLGALQRIVQDD-GAGVVLEKAKLDEAYPVHATIVSNVGNLEAMMVPPDYTKKLEANIPGDFDSLPRLLGRASVEFVMEKPK-GEKFDVAGVLYDKVRLTMVLDGFTAPVTAGTIIDLVQRGYYKNMPITRSDGFVVQTGDPDPEGNVHDFFPPGSDTARKIPLEIAVTEDKLPMYSVTTEDDGRGYAATKLPFQAYGALGMARSEFEADSASCQFFWLLFDSDLTPAGKNLLDGRYAEFGYTVDNQELLADVKEGDIIKSAKVISGMEN 451          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: GAX21297.1 (hypothetical protein FisN_1Lh129 [Fistulifera solaris])

HSP 1 Score: 360.5 bits (924), Expect = 7.700e-96
Identity = 224/466 (48.07%), Postives = 285/466 (61.16%), Query Frame = 0
Query:    7 SAVLALALGPVALDAFLLPPAPLRSGAVGLMTMRAEKDTKTSSSGWHKIPKKLLAPATLAFATWQSTFSFHPALLGSTSSNLMPRLETVRSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAV--RPD-GKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEV-------RKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENLV 463
            +A+  LAL   +  AF    AP  +    + T         +S  W +  ++ L  A +A + W +     PA L ST     P   TV + + A      + +GSRVNKDAESLLRYGLPIN+KE R LQ  +E VK +++SKR         +AK IL+SK  + +KA    PD  +   T ++ E+D      A   ++D  +GS+QERA LD AY+ Q  A  S++ L+E MVP GY V VPEE+  LPQLQGRA V MT+ K      F++    Y    +K+VIDG+NAPVT GNF++LVQKGFY+  PI RSDGFVVQ G   PEG   GYV PG K V       R IPLEIFV  D AP+Y  T ED+GRG  AT +PF +YGA+G AREEY  +S SSQ FWLLF+SDLTPAGKN+LDGRY C GY +E A+ L  V+EGD+IVSAKV +GAENL+
Sbjct:    6 AAITCLALSTTSAGAF----APSTNSPHRIST------ELNASPKWLQKAQQTLVTAGVAASLWSA-----PAFLDST--GFFPTTSTVTAKEMA------SGSGSRVNKDAESLLRYGLPINNKEVRKLQVVLEDVKYDIQSKRKGAALSGSQKAKAILNSKDTEKMKAACREPDVCQKYITAMIQEMDPL--SAALKESQDTFQGSDQERAALDKAYEAQNKAVASLSLLEEQMVPKGYKVPVPEEYNDLPQLQGRATVTMTLVKPNKA-PFQVDAVSYPEAKMKVVIDGYNAPVTGGNFLELVQKGFYDKMPIQRSDGFVVQTG--RPEGNAEGYVAPGSKSVGNGKNGERLIPLEIFVKGDKAPIYEVTIEDEGRGGEATVIPFSSYGAMGWAREEYDPNSGSSQFFWLLFDSDLTPAGKNVLDGRYPCFGYVVEGADFLKAVEEGDIIVSAKVTEGAENLI 443          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: GAX12201.1 (hypothetical protein FisN_1Hh129 [Fistulifera solaris])

HSP 1 Score: 358.2 bits (918), Expect = 3.800e-95
Identity = 225/466 (48.28%), Postives = 285/466 (61.16%), Query Frame = 0
Query:    7 SAVLALALGPVALDAFLLPPAPLRSGAVGLMTMRAEKDTKTSSSGWHKIPKKLLAPATLAFATWQSTFSFHPALLGSTSSNLMPRLETVRSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAV--RPD-GKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEV-------RKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENLV 463
            +A+  LAL   +  AF  P +P R                 +S  W +  ++ L  A +A + W +     PA L ST   + P   T  +V A   +   + +GSRVNKDAESLLRYGLPIN+KE R LQ  +E VK +++SKR         +AK IL+SK  + +KA    PD  +   T ++ E+D      A   ++D  +GS+QERA LD AY+ Q  A  S++ L+E MVP GY V VPEE+  LPQLQGRA V MT+ K      F++    Y    +KMVIDG+NAPVT GNF++LVQKGFY+  PI RSDGFVVQ G   PEG   GYV PG K V       R IPLEIFV  D AP+Y  T ED+GRG  AT +PF +YGA+G AREEY  +S SSQ FWLLF+SDLTPAGKN+LDGRY C GY +E A+ L  V+EGD+IVSAKV +GAENL+
Sbjct:    6 AAISCLALSATSAAAF-APSSPHRIST-----------ELNASPEWLQKAQQTLVTAGVAASLWSA-----PAFLDST--GVFP--TTTSTVTA---KEMASGSGSRVNKDAESLLRYGLPINNKEVRKLQVVLEDVKYDIQSKRKGAALSGSQKAKAILNSKDTEKMKAACREPDVCQKYLTAMIQEMDPL--SAALKESQDTFQGSDQERAALDKAYEAQNEAVASLSLLEEQMVPKGYKVPVPEEYNDLPQLQGRATVSMTLVKPNKA-PFQVDAVSYPEAKMKMVIDGYNAPVTGGNFLELVQKGFYDKMPIQRSDGFVVQTG--RPEGNAEGYVAPGSKSVGNGKNGERLIPLEIFVKGDKAPIYEVTIEDEGRGGEATVIPFSSYGAMGWAREEYDPNSGSSQFFWLLFDSDLTPAGKNVLDGRYPCFGYVVEGADFLKAVEEGDIIVSAKVTEGAENLI 442          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: XP_002178536.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50201.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 340.9 bits (873), Expect = 6.300e-90
Identity = 193/364 (53.02%), Postives = 236/364 (64.84%), Query Frame = 0
Query:  108 TSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTFNE--DAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEV-------RKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENLV 463
            + +GSRVNKD ESLLR GLPI +KE R LQ ++EG+K ++ SKR       V ++K  L  K    +KA   D  +    ++ ++  KLD +A    E  +A +GSEQER  LD AY  Q      +T L+E ++PAGY   VPEE++ LPQL GRA V+M + KA+    F+  GK+     + MVIDG+ APVT GNF+DLVQKGFYN   I RSDGFVVQ GD  P GE  GYV  G K V       R IPLEI V  D  P+Y +T ED+GRG  AT LPF AYGA+G AREEY  +S SSQ FWLLF+SDLTPAGKN+LDGRY C GY  E A+ L+ + EGDVIVSAKVV G ENLV
Sbjct:    3 SGSGSRVNKDPESLLRLGLPIKNKEVRKLQASLEGIKLDIGSKRKLAAADAVKKSKAFLVGKDADKVKAACRD-PSICGAIIKDMVVKLDPLADALKESQEAFQGSEQERTALDKAYAAQQVVVDQLTALEEQLIPAGYKRPVPEEYSDLPQLHGRATVEMLIDKADK-STFDYNGKIVPQAKLVMVIDGYTAPVTGGNFIDLVQKGFYNKMEIQRSDGFVVQTGD--PAGEADGYVAKGSKTVGNGKHGERLIPLEILVRGDSTPVYESTIEDEGRGGEATVLPFSAYGAMGWAREEYDPNSGSSQFFWLLFDSDLTPAGKNVLDGRYPCFGYVTEGADFLSSILEGDVIVSAKVVDGGENLV 362          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: OEU16170.1 (cyclophilin-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 340.5 bits (872), Expect = 8.200e-90
Identity = 189/364 (51.92%), Postives = 243/364 (66.76%), Query Frame = 0
Query:  108 TSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTF--NEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGY--------VPPGQKEVRKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENL 462
            ++ GSRVNKDAESLLR GLPI +KE R+LQ+ IE +K++V SKR +       + K IL+SKK   + A   +      + + EID+ +D +AT    ++DA  GS +E+  LD A+  Q  A+  +T L+E M+PAGYT  VP +++ LPQLQ RA+V+M +KK E G +F+I G  +    + M+IDG+ APVT GNFV+LV KGFYNN  I RSDGFVVQ G  EP+GE  GY        +  G K  R IP EIF+  D  P+Y TT E++GRG  AT LPF AYGA+G AR+EY  +S SSQ FWLLF+SDLTPAGKN+LDGRY   GY IE ++ L  VKEGDVIVSAKV +G E L
Sbjct:    3 SATGSRVNKDAESLLRLGLPIKNKEVRELQKEIETIKQDVSSKRKATAADGAKQVKKILASKKVAKMAANCRESNV-CIDTMKEIDSAMDPLATAIKSSQDAFSGSIEEQNALDNAFNAQQKAATLLTTLEEQMIPAGYTTPVPPQYSDLPQLQRRAKVEMLIKKGEDGAQFDIDGVNFPEAKLTMIIDGYTAPVTGGNFVELVSKGFYNNMKIQRSDGFVVQTG--EPDGEATGYTGGKASKSIGQGPKGERLIPSEIFIQGDKGPIYETTIEEEGRGGEATILPFSAYGAMGWARDEYDPNSGSSQFFWLLFDSDLTPAGKNVLDGRYPVFGYVIEGSDFLQDVKEGDVIVSAKVTEGLEYL 363          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: KOO22559.1 (peptidyl-prolyl cis-trans isomerase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 324.7 bits (831), Expect = 4.700e-85
Identity = 189/370 (51.08%), Postives = 236/370 (63.78%), Query Frame = 0
Query:   96 RSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEI--ATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEG--EVHGYVPPGQKEVRKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENL 462
            RS  A  R+   + +GSRVNKD  SLLR GLP   K  RD Q  IE   + V    L    + ++ AK +LS ++  +LK+V PD  A   +L S I++K+ +   A T  E    G   E A LD            ++ L+EL+         P EFA LP L+GRA V M +K+ +   KF ++G LYD + + MV+DG+ +P+TAGNFVDLV  GFYNN  I RSDGFVVQ GDP+ EG  +++G+VP G  EVRKIPLE+ V  D  P+YG T +DDGRG  A  LPF AYGA+GMAREE   DSASSQ FWLLF+SDLTPAGKNLLDGRYAC GYT++ A LL+ VKEGD+IVSAKV  G ENL
Sbjct:   42 RSAPAFARE-LSSGSGSRVNKDPNSLLRLGLPNQPKGLRDAQLKIEEAADGVTRLTLLNAGQALNSAKGLLSGQRAAILKSV-PDA-ASGEKLFSTIESKVSDASSAITKGEATVAGKALESALLD------------VSALEELIATTYKQAAPPAEFANLPWLKGRATVSMELKRPDG--KFNVQGDLYDKLQVSMVVDGYTSPITAGNFVDLVDSGFYNNFKIQRSDGFVVQTGDPQAEGRQKLNGFVPAGASEVRKIPLEVMVAGDKGPIYGATFDDDGRGGYAAALPFNAYGALGMAREEVDLDSASSQWFWLLFDSDLTPAGKNLLDGRYACFGYTVDGARLLSDVKEGDIIVSAKVTSGLENL 394          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: EJK57783.1 (hypothetical protein THAOC_22142 [Thalassiosira oceanica])

HSP 1 Score: 321.6 bits (823), Expect = 4.000e-84
Identity = 197/458 (43.01%), Postives = 259/458 (56.55%), Query Frame = 0
Query:   11 ALALGPVALDAFLLPPAPLRSGAVGLMTMRAEKDTKTSSSGWHKIPKKLLAPATLAFATWQSTFSFHPALLGSTSSNLMPRLETVRSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEV-------RKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENL 462
            AL L   +++AF   P    S    L +    +D + + +      K  L+   LA A W S       L  + +S  +P          A  +   + +G+RVNKD ESLLRYGLPI +KE R LQ+ IE ++ ++ SKR S    D  +AK I++SK++++                                            LD +YK Q A  + +T LQE M+P GY   VP ++  LPQL+GRA V+M +KK + G  F+I+G L+    +KM+IDG+ APVT GNFVDLV+KGFYN+  I RSDGFVVQ G+  P+GE  GYV    K V       R IP EIFVT D AP Y TT ED+GRG  AT LPF +YGA+G AREEY A+S SSQ FWLLF+SDLTPAGKN+LDGRY   GY +E ++ L  +KEGD+I SAKV +G E+L
Sbjct:   78 ALFLATRSVEAFTSAPPSKTSFQTKLGS--TSRDDENAVADAVDSVKGALSGMALAAALWTSPAMISGQLDPTAASQYLPS-------STASAKEMASGSGTRVNKDPESLLRYGLPIKNKEVRTLQKNIEEIRNDIASKRKSAALDDAKKAKGIINSKEKQMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALDDSYKVQDAIQKELTTLQEQMIPPGYVTPVPSDYDDLPQLEGRATVEMIVKKPD-GSNFDIEGSLFKEAKMKMIIDGYTAPVTGGNFVDLVKKGFYNDMDIQRSDGFVVQTGN--PKGEAEGYVGTPSKSVGAGKHGERLIPSEIFVTGDKAPFYETTIEDEGRGGEATVLPFSSYGAMGWAREEYDANSGSSQFFWLLFDSDLTPAGKNVLDGRYPVFGYVVEGSDFLRDIKEGDIITSAKVTEGEEHL 523          
BLAST of NO01G04860 vs. NCBI_GenBank
Match: XP_005788109.1 (hypothetical protein EMIHUDRAFT_440955 [Emiliania huxleyi CCMP1516] >EOD35680.1 hypothetical protein EMIHUDRAFT_440955 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 311.6 bits (797), Expect = 4.100e-81
Identity = 186/408 (45.59%), Postives = 247/408 (60.54%), Query Frame = 0
Query:   62 PATLAFATWQSTFSFHPALLGSTSSNLMPRLETVRSVQAAGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSKRLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIATTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPEEFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPVTAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPE-------GEVHGYVPPGQKEVRKIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVADSASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIVSAKVVKGAENLV 463
            P+T A A  +S  +   A   S SS + P +       AA  +   + +GSRVNKD  SLLR  LP  SKEAR+LQ  +E  ++N+           + +AK + + K   +LK+V P   A A   L  I+  +DE+          G++   ++   A      A  ++T+LQE M         P+EFA LP L+GRA VD+ ++  +   +F+++GKLY  + +KMV+DG+ +P+TAGNFVDLV++GFYN   I RSDGFVVQ GDP  E        + +GYV  G  +VRKIPLE+ V  D  P+Y  T +DDGRG  A  +PF +YGA+GMAREEY  DSASSQ FWLLF+SDLTPAGKNLLDGRYAC GYT++ A LL+ VKEGD+I SAKV  G  NLV
Sbjct:    7 PSTFAGAAARSLSAAALAXXLSVSS-ITPSVPPAFGPAAAQAKELASGSGSRVNKDPISLLRLALPRVSKEARELQAGLEECQDNLARLNGQVASSALQKAK-VAAGKSGAMLKSVPPAKAAEAQAALDTINAAMDEV----------GAKIAASRQGEALAATERALGAVTQLQEAMASGYAQPSPPKEFASLPYLKGRATVDLVLQPGKEHGQFDVEGKLYKQLEVKMVVDGYTSPITAGNFVDLVRRGFYNGMHIQRSDGFVVQTGDPSNELEGSGADAKKNGYVEGG--KVRKIPLEVMVRGDKDPIYSATFDDDGRGGYAAAMPFNSYGALGMAREEYDPDSASSQWFWLLFDSDLTPAGKNLLDGRYACFGYTVDGARLLSDVKEGDIIASAKVSSGESNLV 400          
The following BLAST results are available for this feature:
BLAST of NO01G04860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29410.11.800e-19878.85peptidyl-prolyl cis-trans isomerase [Nannochlorops... [more]
CEL97061.12.600e-10754.79unnamed protein product [Vitrella brassicaformis C... [more]
CBN79757.12.600e-10456.10Peptidyl-prolyl cis-trans isomerase [Ectocarpus si... [more]
GAX21297.17.700e-9648.07hypothetical protein FisN_1Lh129 [Fistulifera sola... [more]
GAX12201.13.800e-9548.28hypothetical protein FisN_1Hh129 [Fistulifera sola... [more]
XP_002178536.16.300e-9053.02predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU16170.18.200e-9051.92cyclophilin-like protein [Fragilariopsis cylindrus... [more]
KOO22559.14.700e-8551.08peptidyl-prolyl cis-trans isomerase [Chrysochromul... [more]
EJK57783.14.000e-8443.01hypothetical protein THAOC_22142 [Thalassiosira oc... [more]
XP_005788109.14.100e-8145.59hypothetical protein EMIHUDRAFT_440955 [Emiliania ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007779NSK007779Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04860.1NO01G04860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577538gene_511Nannochloropsis oceanica (N. oceanica CCMP1779)gene
CYNgene1214Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04860.1NO01G04860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04860 ID=NO01G04860|Name=NO01G04860|organism=Nannochloropsis oceanica|type=gene|length=1700bp
ACAGGGCCTTCTTCGATTGTCAACCGTCTTCAAGCCCACGTGCTGCATCT
TCCACTTCGTCGAGCCCAATTCACCATGAAAGTTATCCTCTCCTCCGCCG
TCTTGGCCTTGGCCCTGGGCCCCGTCGCCTTAGACGCCTTTTTGCTTCCT
CCCGCGCCTTTGCGATCTGGGGCGGTTGGCTTGATGACCATGCGAGCGGA
AAAGgtacgatgcccgccctttttgattcttgtgagggtgcagctctcga
ggagataatgccgtcgtctgaaaggctccagcaacgcgtccacccatcca
ttccgatcctttgggtggctattatctaacaatttttctgcctcgtgaaa
cgacccgtccttctctttctccctccctccctcccacagGACACTAAGAC
GTCTAGTAGCGGTTGGCATAAAATCCCCAAGAAACTCCTCGCGCCCGCCA
CCCTCGCCTTTGCTACCTGGCAGTCCACTTTCTCGTTTCATCCCGCCCTC
TTGGGCTCTACCTCCTCCAACCTCATGCCTCGCCTTGAAACCGTGCGATC
CGTCCAAGCCGCTGGCCGTCAGAACGCCCCCACCTCAGCCGGGAGCCGGG
TAAACAAAGACGCGGAATCACTCCTCCGCTACGGACTACCCATCAATAGC
AAAGAAGCTCGAGACCTTCAGGAAGCAATCGAAGGGGTGAAAGAAAACGT
CCGCTCCAAGCGCCTCAGTGAAGGCAAAAAAGACGTCAGCCGGGCCAAGA
CGATTCTGTCCTCCAAAAAGGAAAAGCTTCTCAAAGCCGTCCGGCCCGAC
GGCAAAGCCCGCGCCACTGAACTCCTCTCGGAAATCGACACAAAACTAGA
CGAAATTGCGACAACTTTCAATGAAGACGCCGGGCGGGGCTCGGAGCAGG
AACGTGCAAAGCTCGACCTGGCCTACAAGCAGCAAGCCGCGGCCTCCCGC
TCCATCACGGAACTGCAAGAGCTCATGGTGCCGGCCGGATACACCGTTAA
GGTTCCGGAGGAATTTGCGTACTTGCCTCAGCTGCAGGGCCGGGCAGAGG
TGGATATGACGATGAAGAAGGCCGAGGCCGGGGAGAAGTTTGAGATAAAA
GGGAAGCTGTATGACGCCATCAATATCAAGATGGTGATTGACGGGTTCAA
CGCCCCTGTCACGGCCGGGAATTTCGTGGACCTGGTGCAGAAAGGCTTTT
ATAACAACAGACCGATCACGCGGAGCGATGGTTTTGTCGTCCAATTCGGT
GACCCAGAGCCTGAGGGGGAGGTGCATGGCTATGTGCCGCCAGGGCAGAA
GGAAGTGCGGAAGATCCCGCTGGAGATATTTGTGACGCAGGATGACGCAC
CAATGTATGGGACGACGACTGAGGATGATGGTAGGGGCTATAGTGCAACG
AGATTGCCATTCCAGGCATACGGAGCGATAGGGATGGCGAGGGAGGAGTA
TGTGGCGGACTCGGCCAGCAGCCAGGTGTTTTGGTTGTTGTTTGAGAGTG
ACTTAACGCCTGCAGGGAAGAATCTGTTGGATGGGCGGTATGCATGCCTC
GGGTACACGATTGAGAATGCCGAGTTGCTGGCGGGCGTGAAGGAGGGTGA
TGTCATCGTGAGCGCTAAAGTGGTGAAGGGGGCGGAGAACTTGGTGCCGG
GGAAGAAGCAGTAGAGGGAGGGAGGAGGGAGGGAGGGAGGGAGAGAGGGA
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protein sequence of NO01G04860.1

>NO01G04860.1-protein ID=NO01G04860.1-protein|Name=NO01G04860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=468bp
MKVILSSAVLALALGPVALDAFLLPPAPLRSGAVGLMTMRAEKDTKTSSS
GWHKIPKKLLAPATLAFATWQSTFSFHPALLGSTSSNLMPRLETVRSVQA
AGRQNAPTSAGSRVNKDAESLLRYGLPINSKEARDLQEAIEGVKENVRSK
RLSEGKKDVSRAKTILSSKKEKLLKAVRPDGKARATELLSEIDTKLDEIA
TTFNEDAGRGSEQERAKLDLAYKQQAAASRSITELQELMVPAGYTVKVPE
EFAYLPQLQGRAEVDMTMKKAEAGEKFEIKGKLYDAINIKMVIDGFNAPV
TAGNFVDLVQKGFYNNRPITRSDGFVVQFGDPEPEGEVHGYVPPGQKEVR
KIPLEIFVTQDDAPMYGTTTEDDGRGYSATRLPFQAYGAIGMAREEYVAD
SASSQVFWLLFESDLTPAGKNLLDGRYACLGYTIENAELLAGVKEGDVIV
SAKVVKGAENLVPGKKQ*
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Synonyms
Publications