NO01G04820, NO01G04820 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04820 vs. NCBI_GenBank
Match: ETK87374.1 (hypothetical protein L915_08201 [Phytophthora parasitica] >ETL40791.1 hypothetical protein L916_08125 [Phytophthora parasitica] >ETP17234.1 hypothetical protein F441_08354 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 104.4 bits (259), Expect = 8.600e-19 Identity = 63/206 (30.58%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAP-EGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSE------ASFPRIKQVLTVSPCTVDLGG------GQKASLPYAPNDAIYDRFEDEIMVQAAEMNYCF 320 V V F FSDP E F ++ LL +L P + +V+ LA IV + G+++ E DV+ F+T LN+K + + + + + +CP++ L++ L++ + L+ R VNLP L+P LH + H+D+ WA +E SF ++ L ++ CT + G G+K+ Y + FEDE + Q AE+++ F Sbjct: 75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIQNEDTEELRNSF-KMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278
BLAST of NO01G04820 vs. NCBI_GenBank
Match: ETL93924.1 (hypothetical protein L917_08023 [Phytophthora parasitica] >ETP45274.1 hypothetical protein F442_08311 [Phytophthora parasitica P10297]) HSP 1 Score: 104.4 bits (259), Expect = 8.600e-19 Identity = 63/206 (30.58%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAP-EGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSE------ASFPRIKQVLTVSPCTVDLGG------GQKASLPYAPNDAIYDRFEDEIMVQAAEMNYCF 320 V V F FSDP E F ++ LL +L P + +V+ LA IV + G+++ E DV+ F+T LN+K + + + + + +CP++ L++ L++ + L+ R VNLP L+P LH + H+D+ WA +E SF ++ L ++ CT + G G+K+ Y + FEDE + Q AE+++ F Sbjct: 75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIQNEDTEELRNSF-KMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278
BLAST of NO01G04820 vs. NCBI_GenBank
Match: POM73856.1 (BCCIP family protein [Phytophthora palmivora var. palmivora]) HSP 1 Score: 104.4 bits (259), Expect = 8.600e-19 Identity = 64/207 (30.92%), Postives = 106/207 (51.21%), Query Frame = 0 Query: 127 DVEVSFDFSDPDERFFFGIRS-LLQWLAP-EGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSEA------SFPRIKQVLTVSPCTVDLGG------GQKASLPYAPNDAIYDRFEDEIMVQAAEMNYCF 320 +V V F FSDP E F ++ LL +L P + +V+ LA IV + G+++ E DV+ F+T LN+K + + + + + +CP++ L++ L+S + L+ R VNLP L+P LH + H+D+ WA +E SF ++ L ++ CT + G G+K Y + FEDE + Q AE+ + F Sbjct: 75 NVSVDFLFSDPREAHFHSVKQFLLAYLPPSQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQVLQYVTK-KCPSADLPKLQQILNSKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIENEETEELRNSF-KMDYFLILATCTEEKSGSSDSKKGKKTKTTYEQTAKFFHNFEDEFLEQEAELTFSF 279
BLAST of NO01G04820 vs. NCBI_GenBank
Match: XP_009524415.1 (hypothetical protein PHYSODRAFT_497561 [Phytophthora sojae] >EGZ21698.1 hypothetical protein PHYSODRAFT_497561 [Phytophthora sojae]) HSP 1 Score: 103.6 bits (257), Expect = 1.500e-18 Identity = 62/206 (30.10%), Postives = 108/206 (52.43%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAP-EGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSE------ASFPRIKQVLTVSPCTVDLGG------GQKASLPYAPNDAIYDRFEDEIMVQAAEMNYCF 320 V V F FSDP E F ++ LL +L P + +V+ LA +V + G+++ E DV+ F+T LN+K+ + + + + + +CP++ L++ L++ + L+ R VNLP L+P LH + H+D+ WA +E SF ++ L ++ CT + G G+K+ Y + FEDE + Q AE+++ F Sbjct: 80 VSVDFLFSDPREAHFHSVKQFLLAYLPPSQPFDVSGLANAVVGQVTAGTMVCVEGEDDVYGFITALNLKSFAAETSIQQVLQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHSALHEDIEWAIENEDTEELRNSF-KMDYFLILATCTEEKSGSSGSKKGKKSKTAYEQTAKFFHNFEDEFLEQEAEISFSF 283
BLAST of NO01G04820 vs. NCBI_GenBank
Match: XP_008905133.1 (hypothetical protein PPTG_11744 [Phytophthora parasitica INRA-310] >ETN09300.1 hypothetical protein PPTG_11744 [Phytophthora parasitica INRA-310] >KUF80304.1 BCCIP family protein [Phytophthora nicotianae] >KUF82304.1 BCCIP family protein [Phytophthora nicotianae]) HSP 1 Score: 103.6 bits (257), Expect = 1.500e-18 Identity = 63/206 (30.58%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAP-EGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSE------ASFPRIKQVLTVSPCTVDLGG------GQKASLPYAPNDAIYDRFEDEIMVQAAEMNYCF 320 V V F FSDP E F ++ LL +L P + +V+ LA IV + G+++ E DV+ F+T LN+K + + + + + +CP++ L++ L++ + L+ R VNLP L+P LH + H+D+ WA +E SF ++ L ++ CT + G G+K+ Y + FEDE + Q AE+++ F Sbjct: 75 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHLALHEDIEWAIQNEDTEELRNSF-KMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 278
BLAST of NO01G04820 vs. NCBI_GenBank
Match: KUF94845.1 (Metal Ion (Mn2-iron) Transporter (Nramp) Family [Phytophthora nicotianae]) HSP 1 Score: 103.6 bits (257), Expect = 1.500e-18 Identity = 63/206 (30.58%), Postives = 107/206 (51.94%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAP-EGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSE------ASFPRIKQVLTVSPCTVDLGG------GQKASLPYAPNDAIYDRFEDEIMVQAAEMNYCF 320 V V F FSDP E F ++ LL +L P + +V+ LA IV + G+++ E DV+ F+T LN+K + + + + + +CP++ L++ L++ + L+ R VNLP L+P LH + H+D+ WA +E SF ++ L ++ CT + G G+K+ Y + FEDE + Q AE+++ F Sbjct: 73 VSVDFLFSDPREAHFHSVKQFLLAYLPPTQPFDVSGLANAIVGQVTAGTMVCVEGEDDVYGFITALNLKGFANETSIQQILQYVTK-KCPSAELPKLQQILNTKNVGLVLNERMVNLPYQLVPALHLALHEDIEWAIQNEDTEELRNSF-KMDYFLILATCTEEKSGSSGSKQGKKSKTAYEQTAKFFHNFEDEFLEQEAELSFSF 276
BLAST of NO01G04820 vs. NCBI_GenBank
Match: OQS07387.1 (BCCIP family protein [Thraustotheca clavata]) HSP 1 Score: 103.2 bits (256), Expect = 1.900e-18 Identity = 65/211 (30.81%), Postives = 107/211 (50.71%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAPEGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSEASFPRIKQV-----------LTVSPCTVDLGGGQKASLPYAPNDAI--YDRFEDEIMVQAAEMNYCFSRRTE 325 VEV F F+DP E F ++ L+Q+L ++ ++LA LIV + +GS++ ETDVF +T LN+K + + + L+ +CP + + E+ L++ + + R +NLP L+P LH + D+ WA +E + P IK+ + V T G+KA + AI YD FEDE + Q A++ + F + E Sbjct: 35 VEVDFVFTDPCEANFHSVKQHLVQFLPASKLDTSNLANLIVGQVAVGSMVCAEGETDVFGLITALNLKRYGAEPSIQQIVS-LVSSKCPDASRQRFEQILANHNVGLVVSRRLINLPYQLVPHLHSALQQDIDWAIENEQN-PGIKESYKFEYFLFLAGVQVEKQTKKAPAGKKAKASAYTDPAIKTYDNFEDEFLEQEADIAFTFPTKNE 243
BLAST of NO01G04820 vs. NCBI_GenBank
Match: CCA14021.1 (BCCIP family protein putative [Albugo laibachii Nc14]) HSP 1 Score: 102.4 bits (254), Expect = 3.300e-18 Identity = 62/215 (28.84%), Postives = 107/215 (49.77%), Query Frame = 0 Query: 122 EGGGKD-VEVSFDFSDPDERFFFGIRSLLQ--WLAPEGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWA-----QSSEASFPRIKQVLTVSPCTVDLGGGQKASLPYAPNDAI----YDRFEDEIMVQAAEMNYCFSRRTE 325 + G +D V V F FSDP + + I+ L+ A ++ LA++IV + +G+++ ++E D + F+T LN++ ++ + L +R CP K E+ L + + +FL+ R NLP LIP LH + H D+ WA QS F L ++ C+++ ++ + A N A+ Y +FEDE + A++ Y F E Sbjct: 67 DSGNEDLVNVEFVFSDPKQCHYQSIKQLMSSCLSASLSLDTAELADIIVDQVEIGTVVCVSDEPDAYGFITVLNLRHYEERKCIQQLLS-YVRKHCPLDQKDEFEEMLKTKDVGLFLNERLFNLPYQLIPALHSALHQDIEWAISNSEQSRHKKF-HFDYFLVLTTCSIEQVNVERKARTKADNHAVQTKLYQKFEDEFLESQAQLMYSFETPRE 279
BLAST of NO01G04820 vs. NCBI_GenBank
Match: XP_008618728.1 (hypothetical protein SDRG_14382 [Saprolegnia diclina VS20] >EQC27798.1 hypothetical protein SDRG_14382 [Saprolegnia diclina VS20]) HSP 1 Score: 97.8 bits (242), Expect = 8.100e-17 Identity = 62/206 (30.10%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAPEGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSEASFPRIKQV-----------LTVSPCTVDLGGGQKASLPYAPNDAI--YDRFEDEIMVQAAEMNYCF 320 VEV F F+DP E F ++ L+Q+L ++ ++LA +IV + +G+I+ ETD F +T L++K ++ + L L+ +CP + K L++ LS+ + + R +NLP L+P +H + D+ WA +EA+ P +K + V G+KA + AI YD FEDE + Q A++ + F Sbjct: 35 VEVDFVFTDPCEANFHSVKQHLIQFLPASKLDASNLANIIVGQVTVGTIVCNEGETDAFGLITALSLKRYEAEPSIQQLMS-LVISKCPDASKPRLDQILSTNNVGLVVSRRMINLPYQLVPHMHDALQKDIDWAIENEAT-PELKNSYKFDYFLMLAGVQVEKAAKKAPAGKKAKAAAYTDPAIKTYDNFEDEFLEQEADVAFSF 238
BLAST of NO01G04820 vs. NCBI_GenBank
Match: XP_012198028.1 (hypothetical protein SPRG_04048 [Saprolegnia parasitica CBS 223.65] >KDO31433.1 hypothetical protein SPRG_04048 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 97.8 bits (242), Expect = 8.100e-17 Identity = 62/206 (30.10%), Postives = 105/206 (50.97%), Query Frame = 0 Query: 128 VEVSFDFSDPDERFFFGIRS-LLQWLAPEGVNVTSLAELIVQEKGLGSIIHCTNETDVFAFVTTLNIKAHQGNAGMLSLCERLLRPRCPASLKSALEKALSSPETFVFLHGRFVNLPLPLIPLLHKSSHDDMAWAQSSEASFPRIKQV-----------LTVSPCTVDLGGGQKASLPYAPNDAI--YDRFEDEIMVQAAEMNYCF 320 VEV F F+DP E F ++ L+Q+L ++ ++LA +IV + +G+I+ ETD F +T L++K ++ + L L+ +CP + K L++ LS+ + + R +NLP L+P +H + D+ WA +EA+ P +K + V G+KA + AI YD FEDE + Q A++ + F Sbjct: 35 VEVDFVFTDPCEANFHSVKQHLIQFLPASKLDASNLANIIVGQVTVGTIVCNEGETDAFGLITALSLKRYEAEPSIQQLMS-LVISKCPDATKPRLDQILSTSNVGLVISRRMINLPYQLVPHMHDALQKDIDWAIENEAT-PELKNSYKFDYFLMLAGVQVEKQAKKAPAGKKAKAAAYTDPAIKTYDNFEDEFLEQEADVAFSF 238 The following BLAST results are available for this feature:
BLAST of NO01G04820 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04820 ID=NO01G04820|Name=NO01G04820|organism=Nannochloropsis oceanica|type=gene|length=3218bpback to top protein sequence of NO01G04820.1 >NO01G04820.1-protein ID=NO01G04820.1-protein|Name=NO01G04820.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bpback to top Synonyms
Publications
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