NO01G04790, NO01G04790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04790 vs. NCBI_GenBank
Match: EWM29405.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 147.5 bits (371), Expect = 1.600e-31 Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKG 203 +SPGRWNE EHLLFL+GLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKG Sbjct: 157 DSPGRWNEEEHLLFLKGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKG 232
BLAST of NO01G04790 vs. NCBI_GenBank
Match: EWM26740.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 93.2 bits (230), Expect = 3.600e-15 Identity = 44/66 (66.67%), Postives = 57/66 (86.36%), Query Frame = 0 Query: 138 LLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKGG 204 +LFLRGL+++GKSWKKIS+IV TRTVVQIRTHAQKYLIK+EKA+K G G +MM+GK + ++ + G Sbjct: 1 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRG 66
BLAST of NO01G04790 vs. NCBI_GenBank
Match: CBJ27465.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 89.7 bits (221), Expect = 4.000e-14 Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTK 202 ++ GRW EH LFLRGLE++GK WKKI+ ++KTRTVVQIRTHAQKY KI KAK+ G G V M+ K S K Sbjct: 4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRK 78
BLAST of NO01G04790 vs. NCBI_GenBank
Match: GAX28359.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 87.0 bits (214), Expect = 2.600e-13 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGK----AITSST 201 E+ GRW EH LFL+GLE +GK WKKI+ ++K+RTVVQIRTHAQKY K+ KA++ G G + M G+ +ITS+T Sbjct: 97 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRGGNASITSNT 174
BLAST of NO01G04790 vs. NCBI_GenBank
Match: GAX24276.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 87.0 bits (214), Expect = 2.600e-13 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGK----AITSST 201 E+ GRW EH LFL+GLE +GK WKKI+ ++K+RTVVQIRTHAQKY K+ KA++ G G + M G+ +ITS+T Sbjct: 96 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRGGNASITSNT 173
BLAST of NO01G04790 vs. NCBI_GenBank
Match: EWM30452.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 86.7 bits (213), Expect = 3.400e-13 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVM 191 E+ GRW EH+LFL+GLE++GK WKKI++++KTRTVVQIRTHAQKY K+ KAKK G G ++ Sbjct: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDML 161
BLAST of NO01G04790 vs. NCBI_GenBank
Match: XP_002184266.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.9 bits (211), Expect = 5.800e-13 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSS 200 E+ GRW EH LFL+GLE +GK WKKI+ ++K+RTVVQIRTHAQKY K+ KA++ G G V M G+ +S Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVAS 187
BLAST of NO01G04790 vs. NCBI_GenBank
Match: XP_002184267.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44445.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.9 bits (211), Expect = 5.800e-13 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSS 200 E+ GRW EH LFL+GLE +GK WKKI+ ++K+RTVVQIRTHAQKY K+ KA++ G G V M G+ +S Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVAS 187
BLAST of NO01G04790 vs. NCBI_GenBank
Match: CBN78551.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.5 bits (197), Expect = 2.400e-11 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKGGR 205 E+ GRW EH LFLRGLE++GK WK+I+ +++TRTVVQIRTHAQKY K+ KA+ +GT ++ + S+ G+ Sbjct: 29 ENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQ---ASGTSHLDPATLMSTMDAGK 103
BLAST of NO01G04790 vs. NCBI_GenBank
Match: XP_002292776.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89972.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 79.7 bits (195), Expect = 4.100e-11 Identity = 41/77 (53.25%), Postives = 53/77 (68.83%), Query Frame = 0 Query: 127 ESPGRWNEAEHLLFLRGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKGG 204 E+ GRW EH LFL+GLE +GK WKKI+ ++K+RTVVQIRTHAQKY K+ KA+ +G M+ G A S + G Sbjct: 416 ENTGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKARAGDGSGIPMIGGGAGEDSPELG 492 The following BLAST results are available for this feature:
BLAST of NO01G04790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04790 ID=NO01G04790|Name=NO01G04790|organism=Nannochloropsis oceanica|type=gene|length=4641bpback to top protein sequence of NO01G04790.1 >NO01G04790.1-protein ID=NO01G04790.1-protein|Name=NO01G04790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=737bpback to top Synonyms
Publications
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