NO01G04660, NO01G04660 (gene) Nannochloropsis oceanica

Overview
NameNO01G04660
Unique NameNO01G04660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3603
Alignment locationchr1:1226536..1230138 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1226536..1230138 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO01G04660 vs. NCBI_GenBank
Match: EWM29416.1 (hypothetical protein Naga_100042g10 [Nannochloropsis gaditana])

HSP 1 Score: 460.3 bits (1183), Expect = 7.800e-126
Identity = 263/511 (51.47%), Postives = 318/511 (62.23%), Query Frame = 0
Query:    6 RPALKRLKVSIFATAASASLLALKLPSSAAAPTSPSFLFPST-SSSTGNHTQQQSHALLPFSTNPNFVMAANVGALANLKKDAGRAQAMNQLLMDVYGNWEDPSLDFPIPLSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPM-----RMVGGREGERKE-----EEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPE-----EAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQEGERVGRFRRKVEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPIAKEQADLEGLASAYLRHKDGLHVTCDPLGWGLMGWKTEKLGAWAEPIRTRLKVLAPRALAVESGMMLPFRLYGAIMGARLLSGRE 501
            R  ++R K S+F  A ++  LA    S+     +P   FPS  ++++ N+ Q Q+H  L   +     M +N  A   LK++ G +QAM  LL +VYG+WEDPS  FP P+ A EAGPSMVPYGK G CQRRYLWTDAWGVLCFV LAMRC+ S +G + RRE+LL   E LV  VH TLGQPRG AY M     R VG    E KE     E  +TP+ ++GLR GK RA+PGG SDAGM FDGMY+HYLDKWIFALLRLSQACEAFRG GQG++YL+ AE LIK IHPYFV+  +       G   + ++GG        GG+ G   G+YWKVG DMS I GLE  GPSED LSGWVVYSLV QEGER G      +GR                                        LSPI  EQAD+E LA+AY++   GL V+ D LGWGL+ WK + LGAWAEP+RTRL VLAP AL V  GM+LPFRLYGA+MG RL+ G++
Sbjct:    6 RQPVRRTKRSVFVVATTSYFLA--STSTQNYSKTPPLDFPSRFAAASTNNKQNQAH--LTCGSRLLSAMLSNAEARGILKENVGHSQAMISLLKEVYGDWEDPSFHFPKPMPATEAGPSMVPYGK-GLCQRRYLWTDAWGVLCFVGLAMRCNTSRNGGKYRRERLLVTAESLVGAVHATLGQPRGPAYTMLPGKGRQVGSELAEEKEGGEMAEMAQTPNEYVGLRIGKTRAMPGGKSDAGMAFDGMYFHYLDKWIFALLRLSQACEAFRGSGQGDKYLSQAETLIKTIHPYFVRRSQGSRRPPGGPSARPVRGG--------GGERGAPRGVYWKVGTDMSVISGLEDMGPSEDALSGWVVYSLVMQEGERRGE-----QGR-GTRTGDPHTRGQRQAEAIQKGRGGRKELAEQAGGSQERSLSPIVAEQADMEVLAAAYMQGGRGLRVSSDGLGWGLLCWKAQMLGAWAEPVRTRLAVLAPEALEVSRGMLLPFRLYGALMGGRLVEGKD 497          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: XP_002786249.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER18045.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983])

HSP 1 Score: 166.8 bits (421), Expect = 1.800e-37
Identity = 136/401 (33.92%), Postives = 178/401 (44.39%), Query Frame = 0
Query:   96 LLMDVYGNWEDPSLDFPIPLSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQEGERVGRFRRKVEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPIAKEQADLEGLASAYLRHKDGLHVTCDPLGWGLMGWKTEKL-GAWAEPIRTRLKVLAPRALAVESGMMLPFRLYGAIMGARL 496
            L+ DVYG+W+  S  FP PL   EAGP     G  G  QRRYLW DA+GVL FV+L+ R         +R  +LL A   L+K VH TLG PR   +PM +   R G  K           GLR GK  A     SDAGM FDGMY+HY+DKW+FAL+R  QA ++        + L  A  ++K +H YF                      +P     GR  G+ WKV  DM  I GL    P+ D  + +++Y+L+         FR  V                                              + +E ADL     AY +      V+ DPLG+GL  W  + L G  AE  R  L  +AP AL    G+ LPFRLYGA++G ++
Sbjct:   19 LMRDVYGDWKAES--FPKPLPRDEAGP-----GGPGGRQRRYLWIDAFGVLNFVTLSERF-------PDRANELLGAAGTLIKTVHETLGTPRSSEFPMLVDPDRPGCYK-----------GLRIGKLHA--RCNSDAGMQFDGMYWHYIDKWLFALIRYHQATKS-------TDALEHAIRIVKNVHLYFC---------------------VP-----GR--GMRWKVNTDMKSIAGLGEAHPNHDAQTAFIIYTLIDS-------FRPGV----------------------------------------------LERELADLARPFQAYYQVAAEC-VSSDPLGYGLTWWTNQFLRGPEAEREREALIEIAPLALDRRFGISLPFRLYGALLGGQM 303          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: CEM34200.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 146.0 bits (367), Expect = 3.300e-31
Identity = 94/267 (35.21%), Postives = 128/267 (47.94%), Query Frame = 0
Query:   88 GRAQAMNQLLMDVYGNWEDPSLDFPIPLSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLV 355
            G+ Q M +++  VYG   D    FP P+   EAGP+      +G  QRRYLWTDA+ V  +VSLA R     +GD   R   L    +L+  VH +LG PR + YPM             E  +P GF GLR GK        +D GM  DGMY+HY+DKW+FALLR+    +         +YL  A  ++K IH  FV                            G+  G+YWK+G D+  I G E    ++D LS ++VY+L+
Sbjct:    7 GKQQTMARIMDSVYGPLTDA---FPSPMPKTEAGPT-----SQGS-QRRYLWTDAFAVCNYVSLAHRA--GQEGDGQLRAMYLTMAARLIDTVHASLGTPRSEEYPM----------IPSEHNSPSGFKGLRIGK----VDPNTDPGMRADGMYWHYVDKWLFALLRMYNESD-------DAKYLNAAVSIVKDIHESFV------------------------AKWRGKPVGLYWKLGVDLKTIPGAEHTAANDDALSAYIVYALI 217          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: XP_003059581.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH56713.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 120.9 bits (302), Expect = 1.100e-23
Identity = 92/272 (33.82%), Postives = 115/272 (42.28%), Query Frame = 0
Query:   81 ANLKKDAGRAQAMNQLLMDVYGNWEDPSLDF--------PIPLSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRM-------VGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEE---LIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRG 335
            A+L+     A    +L+  VYG+W               P PL   EAG            + RYLWTDA+ VL FVS A R   +  GD   R+  L A   LV+ VH TLGQP     PM +       + G                +GLR GK   L    SD GM  DGMY+HY DKW+FAL RL+ A  A    G      ALA E   LIK +HP++++  E  G                         G+ WK+ PD S IRG
Sbjct:   27 ASLRVAPADAADATKLMRVVYGDWSGAGASLGGSRVSWAPAPLPRTEAG------------RGRYLWTDAFAVLNFVSAAER--RAEMGDAGGRDDALAAALALVRAVHETLGQPSSRQVPMSLSSRAPFALPGAXXXXXXXXXXXXXXHVGLRIGK--TLAAASSDPGMALDGMYFHYHDKWVFALARLADAFGAETSVG-----AALATEATSLIKDVHPHWIERDEHTGAPL----------------------GVRWKINPDASPIRG 255          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: OTA95746.1 (hypothetical protein M434DRAFT_20134 [Hypoxylon sp. CO27-5])

HSP 1 Score: 94.7 bits (234), Expect = 8.600e-16
Identity = 88/273 (32.23%), Postives = 126/273 (46.15%), Query Frame = 0
Query:   97 LMDVYGNWEDPSLDFPIPLS-AAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQL-LEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQEGERVGRFRRK 368
            +  VYG +     D P+P S    A P        G  + RYLWTDA+GV+ F++      LS + D +   QL LE  +KLV  VH  LG+ R  +   R+ G  + E  +          GLR GK   +   G D     DG Y+HYL  W+FAL RLS A    R       + ALA +L KA+HP+F+                       RGGQ      + WK+  DM R+  +  +G  +D + G+VVY L+++  E   +F++K
Sbjct:    1 MQKVYGPY---PTDTPVPASWQPPANPG------AGGHRGRYLWTDAFGVINFIT------LSREKDGSHSHQLHLELAKKLVDTVHSVLGRTRDGS--SRLPGATDSEPLKG---------GLRIGK---VDADGPDG----DGQYHHYLTLWMFALNRLSLATGEAR-------WNALAVQLAKAVHPHFM---------------------TTRGGQ----ESMVWKISTDMRRVL-VNSKGNLDD-VDGFVVYQLLQETAE---KFKKK 203          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: EJU02109.1 (hypothetical protein DACRYDRAFT_115900 [Dacryopinax primogenitus])

HSP 1 Score: 93.2 bits (230), Expect = 2.500e-15
Identity = 81/242 (33.47%), Postives = 109/242 (45.04%), Query Frame = 0
Query:  115 LSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQ 357
            LS  +A   + P   EG  + RYLWTDA+GVL F++L           E R ++ L    +L+  VH  LG+ R      R+ G  E          P G  GLR GKE        D G   DG Y+HYL  W+FAL R+S A        Q + Y  LA  L +AIHP FV    EA +              PR         +YWKV  D+S  + L     + D + G+VVY+L+++
Sbjct:   24 LSTIQASSWIPPAAAEGH-RGRYLWTDAFGVLNFLTLY---------KETREQRYLSLAARLIATVHDILGRTRDGV--SRLPGATEA--------NPVGG-GLRIGKE-------EDTGRDGDGQYHHYLTLWMFALNRMSLA-------SQDQVYNHLAIALAQAIHPAFVH-DREASR--------------PR---------MYWKVSMDLS--KPLVSSEGNLDPIDGYVVYTLLQR 204          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: WP_019177496.1 (hypothetical protein [Methanomassiliicoccus luminyensis])

HSP 1 Score: 90.5 bits (223), Expect = 1.600e-14
Identity = 84/260 (32.31%), Postives = 109/260 (41.92%), Query Frame = 0
Query:  116 SAAEAGPSMVPYGK------EGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGG---REGERKEEEVKTPHGFIGLRTGK--ERALPGGGSDAGMTF--DGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQEGERVG 363
            +AA AG  M+ + K       G   +RYLWTDA+ V  ++ L         GD   R   LE    LV  VH  LG+ R D      + G    EGER            GLR GK     LPG  +D    +  DG YYHYL KW+ AL R++ A           +YL  A EL KA+HP F                    I  PRGG+      +YWK+  D+SR +   +     D L G V YS +     ++G
Sbjct:    6 AAALAGDLMLDFAKITGLAPAGPAPKRYLWTDAFAVCNYLEL-----FQDSGDAEYRNIALE----LVDEVHHVLGKHRSDDGERGWISGLDEYEGERHPTAG-------GLRIGKPLPERLPGEPADPQREWEQDGQYYHYLTKWMHALSRVAAAT-------GDPQYLRWAVELAKAVHPAF--------------------IYSPRGGR----KRMYWKMSIDLSRPQVASM--GQHDPLDGLVTYSEIASRARKLG 216          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: KZT07084.1 (hypothetical protein LAESUDRAFT_758888 [Laetiporus sulphureus 93-53])

HSP 1 Score: 90.5 bits (223), Expect = 1.600e-14
Identity = 83/245 (33.88%), Postives = 111/245 (45.31%), Query Frame = 0
Query:  115 LSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQEGE 360
            LS  EA     P   EG  + RYLWTDA+GVL F++LA    L+ +   N         ++L+  VHG LG+ R   + +       G   E  +       GLR GKE      G D     DG Y+HYL  W+FAL R+S A +  R       Y  LA EL KAIHP FV                  D   PR         +YWK+  DMSR   ++  G + D + G+VVYSL+++  +
Sbjct:  111 LSPTEATRWTPPPMAEGH-RGRYLWTDAFGVLNFITLA---SLTTNPVYN------TLADRLIDTVHGILGRTRDGMHRL------PGATDEHPLAG-----GLRIGKEDEEDDPGGDG----DGQYHHYLTIWMFALNRMSLAAKERR-------YNDLAIELAKAIHPRFV---------------WDRDSPRPR---------MYWKMSIDMSRPM-VQSEG-NLDPIDGYVVYSLLQRSNK 297          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: XP_007917145.1 (putative l-ascorbic acid binding protein [Phaeoacremonium minimum UCRPA7] >EON98084.1 putative l-ascorbic acid binding protein [Phaeoacremonium minimum UCRPA7])

HSP 1 Score: 89.4 bits (220), Expect = 3.600e-14
Identity = 85/280 (30.36%), Postives = 119/280 (42.50%), Query Frame = 0
Query:   87 AGRAQAMNQLLMDVYGNWEDPSLDFPIPLSAAEAGPSMVPYGK-EGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSE---DCLSGWVVYSLVKQEGERVG 363
            + + Q   + +  VYG +E         L+ AEA     P     G  + RYLWTDA+GV+ F++L           E      L    +LV+ VH  LG+ R         G R     +E   +     GLR GK  A  G G       DG Y+HYL  W+FAL RL+ A +        + Y A A EL KAIHP+FV            ++   G +            G+ WKV  D+       +  PSE   D  +G+V+Y L++Q G+R G
Sbjct:    5 SSKLQRFKEAMQLVYGPFEG--------LTQAEAERWTPPESPGAGGHRGRYLWTDAFGVVNFITL---------HKETGSPVYLLFARRLVQTVHDVLGRARDG-------GARLPAASDEHPLSG----GLRIGKVDAAGGDG-------DGQYHHYLTLWMFALNRLALAAD-------DKAYNAQAIELAKAIHPFFV------------MRKASGRL------------GMVWKVSMDLK-----TVLVPSEGHLDPANGYVIYKLLEQTGQRFG 213          
BLAST of NO01G04660 vs. NCBI_GenBank
Match: KLJ10369.1 (hypothetical protein EMPG_14278 [Emmonsia parva UAMH 139])

HSP 1 Score: 89.4 bits (220), Expect = 3.600e-14
Identity = 78/274 (28.47%), Postives = 111/274 (40.51%), Query Frame = 0
Query:   89 RAQAMNQLLMDVYGNWEDPSLDFPIPLSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVSLAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGREGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIFALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQLQGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVVYSLVKQEGERVG 363
            R Q   + +  VYG            LS         P    G  + RYLWTDA+GVL F++L    +LS+ GD+   +  L   ++L+  VH  LG  R     +       G   EE +K      GLR GKE        + G   DG Y+HYL  W+F L R+S A    R P    + ++LA    KAIHP+F                           +      + WKV  D+S  R L     + D + G+VV+ L++    + G
Sbjct:    3 RLQKFQESMESVYGK-----------LSTVPDATKWEPPANSGGHRGRYLWTDAFGVLNFLTLYK--ELSLRGDKTAADNSLIFAQRLITTVHDVLGCTRDGRSRL------PGASHEEPLKG-----GLRIGKE-------DETGPDGDGQYFHYLSMWMFTLNRMSIAT---RDPSYNRQAVSLA----KAIHPHFFL------------------------NRTSDRPHMVWKVAMDLS--RPLVASEGNLDPMDGYVVFRLLQASAMKYG 212          
The following BLAST results are available for this feature:
BLAST of NO01G04660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29416.17.800e-12651.47hypothetical protein Naga_100042g10 [Nannochlorops... [more]
XP_002786249.11.800e-3733.92conserved hypothetical protein [Perkinsus marinus ... [more]
CEM34200.13.300e-3135.21unnamed protein product [Vitrella brassicaformis C... [more]
XP_003059581.11.100e-2333.82predicted protein [Micromonas pusilla CCMP1545] >E... [more]
OTA95746.18.600e-1632.23hypothetical protein M434DRAFT_20134 [Hypoxylon sp... [more]
EJU02109.12.500e-1533.47hypothetical protein DACRYDRAFT_115900 [Dacryopina... [more]
WP_019177496.11.600e-1432.31hypothetical protein [Methanomassiliicoccus luminy... [more]
KZT07084.11.600e-1433.88hypothetical protein LAESUDRAFT_758888 [Laetiporus... [more]
XP_007917145.13.600e-1430.36putative l-ascorbic acid binding protein [Phaeoacr... [more]
KLJ10369.13.600e-1428.47hypothetical protein EMPG_14278 [Emmonsia parva UA... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007806NSK007806Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04660.1NO01G04660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|243478gene_488Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100042g10gene1234Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04660.1NO01G04660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04660 ID=NO01G04660|Name=NO01G04660|organism=Nannochloropsis oceanica|type=gene|length=3603bp
CTCCTTCCCCCCCTCCCCCCGCCGCCGCCTCCGCTGCCAGCCTCGCCGCC
TTCTCCTCCCTTACACCCACAATATACGGAATCCTAAACCGTTTCTGCTT
AGCTCGTTCAAAAATAAACGGCTCCGGTTCCACGAGCTCCGCGCTTTCCG
AGCGCCAATAATCCCCGTCGATCCCCTCCATTGCCTGTTTCCTCTCATCG
ACCGTCATGGGGTCACTCCCCTCCGCCGCAGCCTTATCCGCCTGTGCCTT
CTGCGCCCTAAACCTCCTCTTCCTCCCCAAAAATCGCACTCCCCGTGTGT
CCCCATCATCTTCCACCATAAGCCCTCTCTGTGTCATCCACTCGATGAAG
TCCAGCCTGCGGGGCTGGTAGGCCGGGAAACGGTAATGATAGGGCCATTC
CTGGAAGTGCGGGTACGGAATATTCGACACAGGGGACAACTCTGCAATCG
GCTTGTCTTCCAACCTTGTCCCTGGTGGCATTGTTCCGGGATGTCGCTCC
TTAGGTACGTAGTCATTGCCCCAAAAGTTCTTTTCTTCCTCCGGTTGGGA
GTAGGGCGCATCGTAAGGGGGGAGGGAGCCATGAAGGGGGGTAAAGCTGC
TACTGATGTGATGGCGGGCCAGGGATTGGAGATTTTGGTGAATGGGGTTG
CTGAGTGTAAATGCCTGTGTGGGTAGGGAGGTGGAAATGGAGGAGAGGAG
GAAAGGGACGGGTGAGAGGATGGTTGCTCTCGGAGTAGAAAAAGAAAGGC
AGCAGAGCCTCTGTATACGCGTGCATGACGAGGTATTAATTTGAGGGAAT
GATTGTTGATCTAGAAGGCGACGTGACATTGGGATGCAAGCATTGTTTGT
CCGTTGGACGGGACAGGAGGAGATGCTAAGAGGAAAACAGGGAGGGAGGG
AGCACCGGAAGGGGGGAGGGAAAAGGGGCGTGTGCAAAATTGCGGCATAG
TTTCAAGAGGAGGCCACCTCCTGGCGTTATTGAGTGTAGAACACGCGAGC
GTGGGTATGTATTCCTAGTGCCGGGCAATCCTATATTTATTAGGCCATTT
TAGAAGGGCGGGGGGAGAGTGGGCGGTCGTCATTGCGTACGTACCTGAGC
CTCGGGTGCCCGCCATCCCACAAGAAGCGCTGCCGCCCCCACCATCAATG
CCCCGCTCCGTCGGCTGTTGCTTTCCCTTATTCTTGTTACCGTCTTCGAT
CGCATGTTCATAGCCTGTGCGAGAGACATTATGACAGGTGTGGTTGAGCG
GCCCCGAGAAGTTCAATGAGATGAGAAAGTGGGGAAAACGACGACTTGGA
GCCTCCTGAGGAAGAAAGCCCACTCGGCACCGTCACGGACGCTATCAGCA
CAGCTATTTGTGCATAAAGGTGAGCTAGGGAGGCACATGAGGGGGAAAGA
CATCTGTATCCTCACGACGACATACATTTGCGTCAAATCAGGCTTGCCAG
CGAGCTCCGGCGCCTCGCCAACAGGCCAAACAGGAGCATTCCTTTTCAAG
CTTTCGCTCCATGTGCCAGCACAACAGAACACTTACAACTTTCCCAAGCC
CATCCGCACAAGCACAGGCCTGTGAATGCAGTGGCATGCTCGGCCAGCCT
TGAAGCGCCTGAAGGTCAGCATATTTGCCACTGCCGCGTCTGCTTCTCTC
CTTGCCTTAAAGTTGCCTTCGTCTGCAGCCGCGCCTACCTCCCCCTCTTT
CCTATTCCCATCAACTTCCAGTTCGACCGGCAATCACACCCAGCAGCAAT
CCCACGCCCTATTGCCATTTAGTACCAACCCAAATTTTGTCATGGCGGCC
AACGTGGGGGCCCTTGCGAATTTGAAAAAGGATGCAGGGCGCGCTCAGgt
acgtcaaggaaaaaagacacaaaagaaaatagggttggaagggcaaatta
ttctcaaagaagtggaaagcaaaaagagattgactgcttgctttaaaaca
tcttcaatttatacttgcttgccattgcagatccctttaacgtgcatact
ccaaaccaaaaacatccccaaaaccagGCCATGAACCAACTCCTTATGGA
CGTCTACGGCAACTGGGAAGATCCATCCCTGGACTTTCCCATCCCCTTGT
CCGCCGCCGAAGCAGGACCTTCCATGGTGCCTTACGGAAAGGAGGGTAAA
TGCCAACGTCGCTACCTATGGACGGATGCGTGGGGTGTGTTGTGCTTTGT
GAGTCTAGCCATGCGTTGTGATTTGTCTGTAGATGGAGACGAGAACCGCA
GGGAACAACTGTTGGAAGCGGGGGAGAAGTTGGTCAAGTGCGTACATGGA
ACGTTAGGACAGCCGCGGGGGGATGCATACCCCATGCGGATGGTTGGAGG
GAGAGAGGGAGAGAGAAAGGAGGAGGAAGTGAAGACGCCACATGGGTTTA
TTGGACTGAGGACTGGGAAGGAGAGGGCGTTGCCGGGAGGGGGGAGTGAC
GCAGGAATGACGTTTGATGGCATGTATTATCATTATCTGGATAAGgtgag
gagaaagaggggggagggggaaaagagggagggtggtagagattcttgtt
tgtttgtgatgaccaaggaattgtatgcctttaatttaaagtcatcatca
cctctcccttttccctccctctttcttttcgatagTGGATATTCGCCCTC
CTCCGCCTTTCTCAGGCCTGCGAGGCTTTCCGGGGGCCAGGACAAGGAGA
GGAATATCTGGCCCTTGCTGAGGAGCTGATCAAGGCAATTCATCCTTACT
TCGTGCAGCTTCCGGAGGAGGCGGGGCAGCAGCAGCAGCAGCTGCAAGGA
GGGCAGGGGGATATACGATTGCCACGTGGAGGGCAGGTAGGGAGGGAAGG
AGGAATATATTGGAAGGTGGGGCCTGATATGTCGCGTATTCGGGGTTTGG
AGATCCGCGGGCCCAGTGAGGATTGTTTGAGTGGATGGGTGGTGTATAGT
CTTGTAAAGCAGGAGGGGGAGCGGGTAGGTCGCTTTCGTCGTAAGGTGGA
GGGTAGGGGAGGAGGAAGAGGATCAGGAGGGGAAGAAAAAGGGAAAGAGC
AGCGGCAGCAGCAGCAGCAGCAGGAGGAGGACGAGGAGGAGGAGGACGAG
GAGGACGAGGAGAGGGAAGAGGATAGCCTTAGCCCTATTGCCAAGGAACA
GGCTGATTTAGAGGGATTGGCATCTGCGTACCTGCGGCATAAAGACGGGT
TGCACGTGACGTGCGATCCCCTGGGGTGGGGCCTCATGGGGTGGAAGACT
GAAAAATTAGGTGCGTGGGCTGAGCCGATTCGGACACGCTTGAAGGTCCT
AGCGCCCCGGGCGTTGGCGGTGGAAAGTGGGATGATGCTGCCGTTTCGTT
TGTATGGTGCGATTATGGGGGCCAGGTTGTTAAGTGGACGGGAGGGGGGG
AAGAGAGAGGGAGGGCAGTGGGGGTAATGGCGGAGAGGGCGTTGGAGATT
GTCACGCCGGTAGGGCTGAAGGAGGAAAGGGGAGGGTTGAGGAGCATTAA
CAAGGTGATGCTGGCTGCGGCACTTGACCCTATTGCGTTCTTGAGGCTGG
ACAGGGAGGAAGTGTTGGAATTGCCAGGGGGTGGAAGGGAAGTGGGAAGG
GAG
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protein sequence of NO01G04660.1

>NO01G04660.1-protein ID=NO01G04660.1-protein|Name=NO01G04660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=511bp
MQWHARPALKRLKVSIFATAASASLLALKLPSSAAAPTSPSFLFPSTSSS
TGNHTQQQSHALLPFSTNPNFVMAANVGALANLKKDAGRAQAMNQLLMDV
YGNWEDPSLDFPIPLSAAEAGPSMVPYGKEGKCQRRYLWTDAWGVLCFVS
LAMRCDLSVDGDENRREQLLEAGEKLVKCVHGTLGQPRGDAYPMRMVGGR
EGERKEEEVKTPHGFIGLRTGKERALPGGGSDAGMTFDGMYYHYLDKWIF
ALLRLSQACEAFRGPGQGEEYLALAEELIKAIHPYFVQLPEEAGQQQQQL
QGGQGDIRLPRGGQVGREGGIYWKVGPDMSRIRGLEIRGPSEDCLSGWVV
YSLVKQEGERVGRFRRKVEGRGGGRGSGGEEKGKEQRQQQQQQEEDEEEE
DEEDEEREEDSLSPIAKEQADLEGLASAYLRHKDGLHVTCDPLGWGLMGW
KTEKLGAWAEPIRTRLKVLAPRALAVESGMMLPFRLYGAIMGARLLSGRE
GGKREGGQWG*
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Synonyms
Publications