NO01G04640, NO01G04640 (gene) Nannochloropsis oceanica

Overview
NameNO01G04640
Unique NameNO01G04640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1849
Alignment locationchr1:1224258..1226106 +

Link to JBrowse

Properties
Property NameValue
Description3-ketoacyl-CoA thiolase, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1224258..1226106 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR020616Thiolase_N
IPR020617Thiolase_C
Homology
BLAST of NO01G04640 vs. NCBI_GenBank
Match: XP_005854113.1 (beta-ketoacyl-CoA thiolase [Nannochloropsis gaditana CCMP526] >EKU22248.1 beta-ketoacyl-CoA thiolase [Nannochloropsis gaditana CCMP526] >EWM29392.1 3-ketoacyl- mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 686.8 bits (1771), Expect = 4.100e-194
Identity = 348/406 (85.71%), Postives = 377/406 (92.86%), Query Frame = 0
Query:    1 MAASAFAARKGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELK--EGGGKGYAMGSACIGGGQGIAVLLQGV 405
            M+AS+FAARKGLFIVGAKRTPFGAFGGKLK+FSATELAYLASK AL QAK+DP  V+VVYAGNVIQSSNDACYL+RH+GLKAGVPQHVPALTINRLCGSGFETV MGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWG PLGKGPEMKDSLW+GLTDSLAGTPMGITAENLG KYGITR ECDE+G+RSQ LWAKA+E G   AE+VPVEVKTKKGI+L T DEHPRPQV+LAK+SKL+PVFKK+GLVTAANASGIADGAGALVLATE+ + AH L PLAR+V+W+RVGCDPSIMGIGPVEAI+GALSV+G+ L DLDR+EINEAFAAQFLAC KELGLDM+KTNVHGGAIALGHPLAASGSRI+A LAN LK  +GG KGY MGSACIGGGQGIAVLLQ V
Sbjct:    1 MSASSFAARKGLFIVGAKRTPFGAFGGKLKNFSATELAYLASKAALCQAKLDPSAVNVVYAGNVIQSSNDACYLARHMGLKAGVPQHVPALTINRLCGSGFETVIMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGVPLGKGPEMKDSLWAGLTDSLAGTPMGITAENLGAKYGITRQECDEFGLRSQHLWAKAQERGALQAEIVPVEVKTKKGIDLVTVDEHPRPQVELAKMSKLNPVFKKDGLVTAANASGIADGAGALVLATEDTVHAHKLEPLARVVAWSRVGCDPSIMGIGPVEAIRGALSVSGVALADLDRIEINEAFAAQFLACAKELGLDMSKTNVHGGAIALGHPLAASGSRIVAHLANGLKGQQGGKKGYVMGSACIGGGQGIAVLLQAV 406          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: XP_002291557.1 (3-ketoacyl-coa thiolase, mitochondrial [Thalassiosira pseudonana CCMP1335] >EED91664.1 3-ketoacyl-coa thiolase, mitochondrial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 510.8 bits (1314), Expect = 4.000e-141
Identity = 260/394 (65.99%), Postives = 306/394 (77.66%), Query Frame = 0
Query:   12 LFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANE-LKEGGGKGYAMGSACIGGGQGIAVLLQGV 405
            +FIV AKRTPFGAFGG LK+ SATEL  +++K AL  A IDP  VD VY GNVIQSS DA YL+RHVGLK GVP   PALTINRLCGSGFETV  G ++++L +AS+ +  G+ENMS AP  VDGN  RWG  LGKG  M+DSLW GLTD   GTPMGITAENL  +YGITR +CDE+ +RSQQ W KA + G FD E+  VE++TKKG ++  TDEHPRP   L +I+ L PVFKK+G+VTAANASGI DGAG ++LA+EE ++ HGL PLAR+ S+   GCDPSIMGIGPV AIKGAL  AG+TL D+DR+EINEAFAAQFLAC K L LDM KTN+HGGAI+ GHPL ASGSRI A LANE L+   GK + +GSACIGGGQGIAV+L+ V
Sbjct:    4 IFIVAAKRTPFGAFGGSLKALSATELGAISTKAALSSANIDPSLVDAVYFGNVIQSSPDAAYLARHVGLKCGVPIPTPALTINRLCGSGFETVIQGAKSIKLNEASIVVCGGSENMSMAPLQVDGNDARWGVALGKGLTMRDSLWDGLTDKYVGTPMGITAENLAEQYGITRQDCDEFAIRSQQTWVKAHKNGVFDLEMANVEIETKKGPKIIGTDEHPRPDTSLEQIASLRPVFKKDGVVTAANASGICDGAGTIILASEEAVREHGLQPLARLASYHVSGCDPSIMGIGPVSAIKGALESAGMTLADVDRMEINEAFAAQFLACAKALELDMDKTNLHGGAISFGHPLGASGSRITAHLANEFLRTDAGKVH-VGSACIGGGQGIAVVLERV 396          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: EJK49829.1 (hypothetical protein THAOC_31252 [Thalassiosira oceanica])

HSP 1 Score: 498.0 bits (1281), Expect = 2.700e-137
Identity = 256/431 (59.40%), Postives = 313/431 (72.62%), Query Frame = 0
Query:    4 SAFAARKGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGA------------------------------GALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQGV 405
            S++     +FIVGAKRTPFGAFGG LK  ++T+L  +++K A+  A +DP  +D VY GNVIQSS+DA YL+RHVGL+ GVP   P+LTINRLCGSGFETV  G +++ L ++ VA+  G ENMS +P  VDGN VRWG  LGKG  M+DSLW GLTD  AGTPMGITAENL  KYGITR ECD+  +RSQQ W +A + G FD E+ PVE++TKKG ++ + DEHPRP+  L KIS L PVFKK+G+VTAANASGI DGA                              G ++LA+E+ +K H L PLAR+ S+   GC+PSIMGIGPV AI+GAL+ AGLTL+ +DRVEINEAFAAQFLAC KELGLDM +TN+HGGAI+LGHPL ASGSRI+A LANE +   G  Y +GSACIGGGQGIAV+L+ V
Sbjct:   90 SSYNIMSNVFIVGAKRTPFGAFGGSLKKLTSTDLGVVSTKAAISAANLDPSSIDAVYFGNVIQSSSDAAYLARHVGLRCGVPIAAPSLTINRLCGSGFETVIQGAKSILLKESKVAVCGGAENMSMSPLQVDGNDVRWGVGLGKGLSMRDSLWDGLTDQYAGTPMGITAENLAEKYGITREECDKLAIRSQQTWGEAHKDGVFDLELAPVEIETKKGTQVVSVDEHPRPETSLEKISSLRPVFKKDGVVTAANASGICDGAGECGRSTFASACAGPRAEDAISSTHFARLSGTIILASEDAVKEHDLKPLARLASYQVSGCEPSIMGIGPVPAIRGALASAGLTLDQVDRVEINEAFAAQFLACAKELGLDMDRTNLHGGAISLGHPLGASGSRIVAHLANEFQRSDGDIY-VGSACIGGGQGIAVVLERV 519          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: CBN74299.1 (Acetyl-CoA acetyltransferase, putative mitochondrial presursor [Ectocarpus siliculosus])

HSP 1 Score: 487.6 bits (1254), Expect = 3.600e-134
Identity = 249/397 (62.72%), Postives = 299/397 (75.31%), Query Frame = 0
Query:    8 ARKGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQGV 405
            A  G+FIVGAKRT FG+FGG L   SAT+LA  +SK AL+ A I P  +D  + GNVIQ+S DACYLSRHV LK G     PALT+NRLCGSGFETV  G EA++LG+ASVAL AG ENMS+AP VV GN  RWG  LG G +M+DSLW+GLTDS AG PMG+TAENLG KYGITR +C+EY V SQ  W+     G F  E+ P+EVKTKKG ++  TDEHPRP   + K++ L PVFKK+G+VT+A ASGI DGAG+L+LA E  +    L PLAR+V+   VGCDP+IMGIGPV AI+GAL  AGLTL D+D VE+NEAFA Q+LA  KELGL+  KTN +GGAIALGHPL ASGSRI+A L +EL+  G K Y +G+ACIGGGQGIAV+++ V
Sbjct:    2 AASGVFIVGAKRTAFGSFGGSLSRLSATDLAVASSKAALVSAGIGPDLIDATFVGNVIQTSPDACYLSRHVALKVGARVETPALTVNRLCGSGFETVVQGAEAIQLGKASVALCAGAENMSSAPLVVAGNDARWGVALGSGLKMEDSLWAGLTDSYAGLPMGMTAENLGDKYGITREQCEEYSVLSQTRWSSGNANGAFTEEMAPIEVKTKKGPKVMDTDEHPRPS-SVEKMAALRPVFKKDGVVTSATASGICDGAGSLLLAGESAVNQKQLTPLARVVATHEVGCDPAIMGIGPVNAIRGALQKAGLTLADMDLVEVNEAFAVQYLAVEKELGLERGKTNTNGGAIALGHPLGASGSRIMAHLTHELRRKGLK-YGVGAACIGGGQGIAVVIENV 396          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: GAX18866.1 (acetyl-CoA acyltransferase 2 [Fistulifera solaris])

HSP 1 Score: 480.3 bits (1235), Expect = 5.800e-132
Identity = 246/392 (62.76%), Postives = 299/392 (76.28%), Query Frame = 0
Query:   11 GLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQ 403
            G+F+V AKRTPFGAFGG  K+ SA +L   +++ AL    IDP  VD +Y GNVIQ+ +DA YLSRH+GLK+G+P   PALT+NRLCGSGFETV    ++++LG++ V+LA G E+MS AP    G +VRWGT LG+G  + DSLW+GLTD+ AGTPMG+TAENLG KY ITR ECDEY +RSQQLW KA + G F AE+ PV VK KK   L  TDEHPRP     KI+KL  VF+K+G+V+AANASGI DGAG++++A+EE +K H L PLARIVS+   GC+P+IMGIGPV AI+ ALS AGLTL D+DRVEINEAFAAQ LAC KEL LDM K N+HGGAI+LGHPL ASGSRI+A L N     G   Y +G+ACIGGGQGIAVLL+
Sbjct:    3 GIFVVAAKRTPFGAFGGSFKNTSAVQLGVASTQAAL--QNIDPTIVDSIYFGNVIQTGDDAAYLSRHIGLKSGIPIATPALTLNRLCGSGFETVVQSFKSIQLGESHVSLAGGVESMSLAPLNASG-TVRWGTSLGQGISLTDSLWNGLTDAHAGTPMGVTAENLGKKYDITRAECDEYAIRSQQLWKKANDNGVFQAEMAPVSVKNKKKEVLVDTDEHPRPDSTFEKINKLPSVFQKDGVVSAANASGICDGAGSVIIASEEAVKQHNLTPLARIVSYGVTGCEPTIMGIGPVTAIQQALSKAGLTLRDMDRVEINEAFAAQVLACAKELDLDMDKFNIHGGAISLGHPLGASGSRIMAHLVNTW--SGNDKYYIGAACIGGGQGIAVLLE 389          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: XP_002180306.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48497.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 474.9 bits (1221), Expect = 2.400e-130
Identity = 246/395 (62.28%), Postives = 293/395 (74.18%), Query Frame = 0
Query:   12 LFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRW-GTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKG-IELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQGV 405
            ++IV AKRTPFGAFGG LKS SAT+L   A+K AL    +DP  VD VY GNVIQSS DA YL+RHVGL+A  P   PALTINRLCGSGFETV      + LG++ VA+A GTENMSAAP  +DGN  RW G  LG G ++ D+LW GLTDSLA TPMG TAENL T+Y I+R ECDEY +RSQQ W  A++ G FDAE+ P+E+  +KG   +  TDEHPR    L KI+ L PVF K G+VTAANASGI DGAGA++LA+E+ +  H L PL R+VS+   GC+P++MGIGPVEAI+ AL  A L L D+DR+EINEAFAAQ LAC KELGLD  KTN+HGGAI+LGHPL ASGSRI+A LA+E        Y +GSACIGGGQGIAVL++ V
Sbjct:    9 VYIVAAKRTPFGAFGGALKSVSATDLGAHATKTALASGNVDPSLVDAVYFGNVIQSSPDAAYLARHVGLQAQCPIATPALTINRLCGSGFETVVQAANGIRLGESHVAVAGGTENMSAAPLTLDGNVARWGGVKLGHGMKLGDALWDGLTDSLAQTPMGQTAENLATQYNISRAECDEYAIRSQQTWGAAQQAGLFDAEMAPMELPGRKGTTTVVDTDEHPRVDTLLEKIASLRPVFSKTGVVTAANASGICDGAGAVILASEQAVLEHNLTPLCRVVSYGITGCEPTVMGIGPVEAIRQALHRANLKLADMDRIEINEAFAAQVLACAKELGLDWDKTNLHGGAISLGHPLGASGSRIVAHLAHEFATNSAAQYHIGSACIGGGQGIAVLMERV 403          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: GAX21209.1 (acetyl-CoA acyltransferase 2 [Fistulifera solaris])

HSP 1 Score: 474.9 bits (1221), Expect = 2.400e-130
Identity = 243/392 (61.99%), Postives = 297/392 (75.77%), Query Frame = 0
Query:   11 GLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQ 403
            G+F+V AKRTPFGAFGG  K  SA +L  +A++ AL    IDP  VD +Y GNVIQ+ +DA YLSRH+GLK+G+P   PALT+NRLCGSGFE+V    ++++LG++ V+LA G E+MS AP    G +VRWGT LG+G  + DSLW+GLTD+ AGTPMG+TAENLG KY ITR ECDEY +RSQQLW KA + G F AE+ PV VK KK      TDEHPRP     KISKL  VF+K+G+V+AANASGI DGAG++++A+E+ +K H L P+ARIVS+   GC+P+IMGIGPV AI+ AL  AGLTL D+DRVEINEAFAAQ LAC KEL LDM K N+HGGAI+LGHPL ASGSRI+A L N     G   Y +G+ACIGGGQGIAVLL+
Sbjct:    3 GIFVVAAKRTPFGAFGGSFKQTSAVQLGVVATQAAL--QNIDPTIVDSIYFGNVIQTGDDAAYLSRHIGLKSGIPIATPALTLNRLCGSGFESVVQSYKSIQLGESHVSLAGGVESMSLAPLNASG-TVRWGTSLGQGISLTDSLWNGLTDAHAGTPMGVTAENLGKKYEITRAECDEYAIRSQQLWKKASDNGVFKAEMAPVSVKNKKKEAFVDTDEHPRPDSTFEKISKLPSVFQKDGVVSAANASGICDGAGSVIVASEQAVKQHNLTPIARIVSYGVTGCEPTIMGIGPVTAIQQALGKAGLTLGDMDRVEINEAFAAQVLACAKELDLDMDKFNIHGGAISLGHPLGASGSRIMAHLVNTW--SGTDKYYIGAACIGGGQGIAVLLE 389          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: XP_020669150.1 (3-ketoacyl-CoA thiolase, mitochondrial [Pogona vitticeps])

HSP 1 Score: 468.0 bits (1203), Expect = 3.000e-128
Identity = 236/396 (59.60%), Postives = 298/396 (75.25%), Query Frame = 0
Query:    7 AARKGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQ 403
            A  +G+FIV AKRTPFGAFGG LK F+AT+L+ +A++ AL   KI P+ +D +  GNV+Q S DA YL+RHVGL+ GVP  VPALT+NRLCGSGF+++A GC+ + L ++ V L  G ENMS +P+ V   ++R+GT LG   +++D+LW+GLTD    TPM ITAENL  KY ITR ECD Y ++SQQ W    E G F AE+ P+EVKTKKG ++   DEHPRP+  + ++ KL PVFKK+G VTA NASGI DGAG +V+A+E+ +K H L PLARIVS+  VGCDP+IMGIGPV AI  AL  AGL+L D+D VE+NEAFA Q+LA  K LGLD  KTN+HGGAIALGHPL ASG+RI A L +EL+  GGK YA+GSACIGGGQGIAV+++
Sbjct:    2 ALLRGVFIVSAKRTPFGAFGGLLKDFTATDLSEIAARSALSAGKISPEIIDSLIVGNVMQCSPDAIYLARHVGLRIGVPVAVPALTVNRLCGSGFQSIANGCQEICLKESEVVLCGGAENMSQSPYTV--RNIRFGTKLGLDLKLEDTLWAGLTDLHIKTPMAITAENLAAKYNITREECDRYALKSQQRWKAGDEAGYFKAEMAPIEVKTKKGKQIMEQDEHPRPKATMEELGKLPPVFKKDGTVTAGNASGICDGAGVVVIASEDAVKKHNLTPLARIVSYHSVGCDPNIMGIGPVPAITEALKKAGLSLKDMDLVEVNEAFAPQYLAVEKVLGLDPEKTNIHGGAIALGHPLGASGTRITAHLVHELRRRGGK-YAVGSACIGGGQGIAVVIE 394          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: XP_022351327.1 (3-ketoacyl-CoA thiolase, mitochondrial [Enhydra lutris kenyoni])

HSP 1 Score: 466.5 bits (1199), Expect = 8.600e-128
Identity = 229/393 (58.27%), Postives = 298/393 (75.83%), Query Frame = 0
Query:   10 KGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQ 403
            +G+FIV AKRTPFGA+GG LK F+AT+L  +A+K AL   K+ P+ +D V  GNVIQSS+DA YL+RHVGL+ GVP+ VPALT+NRLCGSGF+++  GC+ + + +A V L  G E+MS +P+ V   ++R+GT  G  P+++D+LWSGLTD     PMGITAENL  K+ I+R +CD+Y ++SQQ W  A + G F+ E+ P+EVKTKKG +    DEH RPQ  L +++KL PVFKKEG VTA NASG++DGAGA+++A+E+ +K H   PLARIV +   GCDPSIMGIGP+ AI GAL   G +L D+D VE+NEAFA Q+LA  K LGLD +KTNV+GGAIALGHPL  SGSRI+A L +EL+  GGK YA+GSACIGGGQGIAV+++
Sbjct:    5 RGVFIVAAKRTPFGAYGGLLKDFTATDLTEVAAKAALSAGKVSPETIDSVIVGNVIQSSSDAAYLARHVGLRVGVPKEVPALTVNRLCGSGFQSIVSGCQEICVKEAEVVLCGGVESMSQSPYCV--RNIRFGTKFGSDPKLEDALWSGLTDEHIRLPMGITAENLAAKHNISREDCDKYALQSQQRWKAANDAGYFNNEMAPIEVKTKKGKQTMQVDEHARPQTTLEQLTKLPPVFKKEGTVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPIPAINGALKKIGRSLKDMDLVEVNEAFAPQYLAVEKSLGLDPSKTNVNGGAIALGHPLGGSGSRIMAHLVHELRRRGGK-YAVGSACIGGGQGIAVVIE 394          
BLAST of NO01G04640 vs. NCBI_GenBank
Match: XP_004703039.1 (PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial [Echinops telfairi])

HSP 1 Score: 465.3 bits (1196), Expect = 1.900e-127
Identity = 235/396 (59.34%), Postives = 296/396 (74.75%), Query Frame = 0
Query:    7 AARKGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAKIDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSGFETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPEMKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKAKEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEGLVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMGIGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNVHGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVLLQ 403
            A  +G+FIV AKRT FGA+GG LK F+AT+L   A+K AL    I P+ VD V  GNV+QSS+DA YL+RHVGL+ GVP+ VPALTINRLCGSGF+++  GC+ + +  A V L  GTE+MS AP+ V   +VR+GT  G   +M+DSLW+GLTD     PMGITAENL  K+ I+R +CD Y ++SQQ W  A + G F AE+ P+EVKTKKG +    DEHPRPQ  L ++SKL PVFKKEG VTA NASG++DGAGA+V+A+E+ +K H   PLAR+V +   GCDP+IMGIGPV AI GAL   GL+L D+D VE+NEAFA Q+LA  K LGLD +K+NV+GGAIALGHPL  SGSRI++ L +EL+  GGK YA+GSACIGGGQGIAV+++
Sbjct:    2 ALLRGVFIVAAKRTAFGAYGGLLKDFTATDLTEFAAKAALSAGNIPPETVDSVIVGNVMQSSSDAAYLARHVGLRVGVPKEVPALTINRLCGSGFQSIINGCQEIGVKDADVVLCGGTESMSQAPYCV--RNVRFGTKFGSDLKMEDSLWAGLTDQHVQLPMGITAENLAAKHSISREQCDRYALQSQQRWKAANDAGCFTAEMAPIEVKTKKGKQTMQVDEHPRPQATLEQLSKLPPVFKKEGTVTAGNASGVSDGAGAVVIASEDAVKKHSFTPLARVVGYFVSGCDPAIMGIGPVPAISGALKRTGLSLKDMDLVEVNEAFAPQYLAVEKSLGLDPSKSNVNGGAIALGHPLGGSGSRIISHLVHELRRRGGK-YAVGSACIGGGQGIAVIIE 394          
The following BLAST results are available for this feature:
BLAST of NO01G04640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854113.14.100e-19485.71beta-ketoacyl-CoA thiolase [Nannochloropsis gadita... [more]
XP_002291557.14.000e-14165.993-ketoacyl-coa thiolase, mitochondrial [Thalassios... [more]
EJK49829.12.700e-13759.40hypothetical protein THAOC_31252 [Thalassiosira oc... [more]
CBN74299.13.600e-13462.72Acetyl-CoA acetyltransferase, putative mitochondri... [more]
GAX18866.15.800e-13262.76acetyl-CoA acyltransferase 2 [Fistulifera solaris][more]
XP_002180306.12.400e-13062.28predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX21209.12.400e-13061.99acetyl-CoA acyltransferase 2 [Fistulifera solaris][more]
XP_020669150.13.000e-12859.603-ketoacyl-CoA thiolase, mitochondrial [Pogona vit... [more]
XP_022351327.18.600e-12858.273-ketoacyl-CoA thiolase, mitochondrial [Enhydra lu... [more]
XP_004703039.11.900e-12759.34PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007809NSK007809Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04640.1NO01G04640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577446gene_486Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100042g8gene1236Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04640.1NO01G04640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04640 ID=NO01G04640|Name=NO01G04640|organism=Nannochloropsis oceanica|type=gene|length=1849bp
CAGCAGTCCACGCAACAGCAGCAATAACAGCAGCATGGCCGCATCCGCCT
TTGCCGCTCGCAAGGGCCTCTTTATCGTGGGTGCAAAGCGCACGCCCTTT
Ggtacgttcttgaatttcatagtatcgtcattcttgaaccaggactgagc
taacttatgcaagcaagccatcccctcaagctgtgccgtccgtatgcctt
caatctgctccttcatccatctagactgcatgcttcctctcgcgtctcaa
ttttgctcttgtttctcaccctctcgcatctcaattttgctcttgtttct
catccaggctttgtattctatcagcacagcacttgcctcggcctcaccat
catccttcccctcacagGTGCATTTGGTGGCAAGCTTAAGTCCTTCTCCG
CCACTGAGCTCGCCTACCTGGCCTCAAAAGGCGCTCTACTCCAAGCTAAA
ATCGACCCCAAGCACGTGGATGTAGTCTATGCCGGGAATGTCATCCAATC
TTCCAACGATGCCTGTTATCTGTCTCGTCACGTCGGTCTCAAGGCAGGAG
TACCCCAACATGTGCCAGCCCTGACCATCAACCGTCTCTGCGGCAGCGGC
TTTGAGACAGTAGCGATGGGTTGCGAGGCTATGGAGCTCGGCCAGGCCTC
CGTGGCCTTGGCAGCAGGGACAGAAAACATGTCCGCGGCTCCCTTTGTCG
TGGACGGGAATAGCGTGAGGTGGGGCACGCCCCTGGGGAAAGGCCCGGAA
ATGAAGGACTCGCTTTGGTCGGGATTAACAGACTCCTTGGCCGGTACGCC
GATGGGGATTACCGCAGAAAATTTGGGGACGAAGTACGGGATTACGAGGG
GGGAGTGCGATGAGTACGGCGTGAGGTCTCAGCAGCTGTGGGCCAAGGCA
AAGGAGGGGGGGAAATTTGACGCAGAGGTCGTCCCTGTGGAAGTGAAGAC
TAAGAAGGGGATCGAGTTGTTCACGACTGACGAGCACCCGCGGCCGCAGG
TGGATTTGGCCAAGATCTCGAAACTGTCCCCTGTGTTTAAGAAGGAGGGG
CTAGTCACGGCGGCGAATGCAAGTGGCATTGCCGACGGTGCCGGTGCATT
GGTGTTGGCGACCGAAGAGGTTATCAAAGCTCATGGTCTGATACCTCTTG
CGAGGATTGTGTCGTGGGCGAGGGTGGGATGTGACCCCAGCATTATGGGC
ATAGGGCCCGTAGAGGCGATCAAGGGGGCGTTGAGTGTAGCGGGGTTGAC
GTTGAACGACTTGGATCGGGTGGAGATCAACGAGGCGTTCGCCGCACAGT
TTTTGGCGTGTCGTAAGGAGTTGGGATTGGACATGGCCAAGACGAATGTG
CATGGGGGGGCGATCGCGTTGGGCCATCCATTGGCAGCGTCGGGATCCAG
GATTCTTGCCAGTCTGGCCAATGAGTTGAAGGAGGGAGGGGGCAAAGGGT
ATGCCATGGGGAGTGCGTGTATTGGGGGTGGGCAGGGAATAGCGGTGTTG
TTGCAGGGGGTTTAATTAAGGATGGAGGGAATAAGGGAAGGAGGGAGGGA
CGGAGGCTTTGTACTGATTTTGAATGGCAGCGGTTGTAAGCACAATTTAC
CGAAGTCAGAAGGCAGAAGAAAATGTGGGGGAATGGTTTTCAGTAATTTT
ACACTTGAAAGGAAAGGAAAAAGAAAAATTATGGATTATGGGGGAGTTGG
ACTCGTAGGAAAGTATGGTGCGCGCAGCTTCGCATTTTTGTCACGAGGGG
AGGTAAAGATGTAGCATGACTGACGATGGTGACAGCGTGAGGAGACTAAG
ACACTATCGCACAGAAAGTAGAAAACCAGCAGAAAGGGAGGGGGGGGGG
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protein sequence of NO01G04640.1

>NO01G04640.1-protein ID=NO01G04640.1-protein|Name=NO01G04640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=405bp
MAASAFAARKGLFIVGAKRTPFGAFGGKLKSFSATELAYLASKGALLQAK
IDPKHVDVVYAGNVIQSSNDACYLSRHVGLKAGVPQHVPALTINRLCGSG
FETVAMGCEAMELGQASVALAAGTENMSAAPFVVDGNSVRWGTPLGKGPE
MKDSLWSGLTDSLAGTPMGITAENLGTKYGITRGECDEYGVRSQQLWAKA
KEGGKFDAEVVPVEVKTKKGIELFTTDEHPRPQVDLAKISKLSPVFKKEG
LVTAANASGIADGAGALVLATEEVIKAHGLIPLARIVSWARVGCDPSIMG
IGPVEAIKGALSVAGLTLNDLDRVEINEAFAAQFLACRKELGLDMAKTNV
HGGAIALGHPLAASGSRILASLANELKEGGGKGYAMGSACIGGGQGIAVL
LQGV*
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Synonyms
Publications