NO01G04580, NO01G04580 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G04580
Unique Name	NO01G04580
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3415
Alignment location	chr1:1209739..1213153 -

Link to JBrowse

Properties


Property Name	Value
Description	Methionyl-trna synthetase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:1209739..1213153 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004812	aminoacyl-tRNA ligase activity
GO:0000166	nucleotide binding
GO:0005524	ATP binding
GO:0000049	tRNA binding
GO:0004825	methionine-tRNA ligase activity
GO:0003824	catalytic activity
GO:0003723	RNA binding
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation
GO:0006431	methionyl-tRNA aminoacylation
GO:0006412	translation
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR009080	tRNAsynth_1a_anticodon-bd
IPR015413	Methionyl/Leucyl_tRNA_Synth
IPR002547	tRNA-bd_dom
IPR033911	MetRS_core

Homology

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BLAST of NO01G04580 vs. NCBI_GenBank
Match: CCI41122.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 673.3 bits (1736), Expect = 1.000e-189
Identity = 357/783 (45.59%), Postives = 473/783 (60.41%), Query Frame = 0

Query:  102 ERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKDP-FGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRALGMGEGNI 884
            E+FY+TTAI+YTNG PH+GHAYE VT+DVIARY RM G+ V+FLTGTDEHGQK+A TA+  G+ P+ELCDKYA  F  L + L +SN  F+RTT  +H + AQ L++R    DDIYL  Y GWYNVREE FVTE EA  +++KDPVSG+PLKKM E SYFFRMSKYQ +LIDH+   P F+ PE+RR  I+ RLEE L DLS SR TF  G+P+P+   P+HVLYVWFDAL+NY++ I + +          +  +WPA VH+IGKDI WFHCVIWP ILMS G+ LP+S+FAHGF++ KDG KMSKS+GNV+DP+D++ +F +++FRY+L +   +G D  FS   ++  HN+ELAD LGNLVHR VN+C+K+ +G VP    L   +            P D   + ++       FAL+V    V+   RD N++LT+  PW M  +     R  VVR  LEA+Y++AHFLAP +P  + +IFEKLGTPPQ +  L     NL  G  V VG+ILF K+  A E                                                                            +A          F+ +DIRVG I +VW H  +D L+CEEIE+GE +P+Q+ASGLR+ Y LEEM  +KVLV+ NLK AKL GF+S GMVL AS  +   +V  VEPP +A  G+RV +++   D     P++A Q+KK+K WE V   L+T+ +G+A ++   + T  G CRA  + +  I
Sbjct:   49 EKFYITTAIHYTNGQPHMGHAYENVTADVIARYHRMFGRDVYFLTGTDEHGQKIAQTADALGVAPMELCDKYAAIFEQLTRDLNMSNSSFIRTTSEKHKVFAQWLFQRALDRDDIYLGTYEGWYNVREEVFVTEVEAHQSEYKDPVSGIPLKKMREESYFFRMSKYQQRLIDHLHAHPEFLQPETRRQEIMKRLEEPLQDLSSSRNTFSHGVPLPND--PKHVLYVWFDALANYLSAIGFPD-------QIEAKTYWPANVHIIGKDITWFHCVIWPCILMSTGIALPKSVFAHGFVNAKDGSKMSKSIGNVVDPYDIMNKFGLESFRYFLVRSARYGQDWPFSENDLIHIHNAELADTLGNLVHRTVNICKKYADGVVP--NTLSPDR------------PFDFITLLSESETAYRDFALQVAVILVVDALRDVNRYLTDKAPWHMTEN---APRLLVVRTCLEAIYLIAHFLAPFIPNTSDKIFEKLGTPPQKLIELSPSFDNLVAGTKVVVGDILFQKVLTAEE-----------------------------------------------------------ILQAEQSLEKKANGNASVATKPKKNDLQLFASLDIRVGQITQVWPHPDSDELYCEEIEIGEAEPKQIASGLRKFYKLEEMKNRKVLVLLNLKPAKLRGFKSFGMVLCAS-DEAHERVEFVEPPPDAKPGDRVVIDTENGD-----PLSAAQLKKQKVWEKVAVELRTNAEGIATYKDQVIKTPVGVCRAKTLNDARI 740

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: KUF65279.1 (Methionine--tRNA ligase [Phytophthora nicotianae])

HSP 1 Score: 663.3 bits (1710), Expect = 1.000e-186
Identity = 379/806 (47.02%), Postives = 496/806 (61.54%), Query Frame = 0

Query:   71 DKLIVMAIVEDPRAPLIGEPGVTLPGGPAAGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRA 876
            DKL V    +D R   + +    L     + E FY+TTAI+YTNG PH+GHAYE V +DVI+RY R+ G+ V+FLTGTDEHGQK+A TAE +G+TP +L DKYAG F+ L K L +SN+ F+RTT   H   AQ L+++     D+YL  Y GWYNVREE FVTE EA L D+KDP +G P KKM+E SYFF+MSKYQ +L+ HI+++P F+ PE RR  +L RL+E L DLS SR TF  GIP+ +   P+HVLYVWFDAL+NY++ I +        P    + +WPA VH+IGKDI WFHCVIWP ILMS G+PLP+ +FAHGF++ KDG KMSKS+GNVIDP+ MI+++ +++FRY++ +   FG D+ FS + ++  HNSELAD LGNLVHR VN+C+K+  G VP  K  +               P D+ E+        + FAL+     ++   +DTNK+LTE EPW MK +   E R  VVR  LEA+YVLAH+L+PI+P  A  IFEKLGT P  +  L  D  NL  G  VS+G ILF K+    E    XXXXXXXXXXXXXXXXXXX                                                                 F+ +DIRVG I +VW H  +D+L+CEEI++GE +P+Q+ASGL+  Y+LEEM  +KVLV+ NLK AKL GF+S GMVL A   +    V  VEPP +A VGERV + S   +     P++A Q+KK+K  E V     TD + VA ++G +++T+AG C A
Sbjct:   12 DKLEVAQQQQDAR---VEQLQTKLEAVKPSQETFYLTTAIHYTNGLPHMGHAYENVCADVISRYHRVFGRDVYFLTGTDEHGQKIAQTAEAAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGTYEGWYNVREEMFVTETEAQLTDYKDPTTGTPFKKMQEQSYFFKMSKYQDRLVKHIEENPEFLQPEVRRQELLRRLQEPLQDLSASRNTFTHGIPILND--PKHVLYVWFDALANYLSAIGY--------PDGPDARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGSKMSKSVGNVIDPYAMIEKYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNLVHRTVNICKKYSNGXVPEAKADK---------------PFDIYELLKYSEDSYKDFALQNACIAIVNALKDTNKYLTEKEPWHMKEN---EPRLVVVRTCLEAIYVLAHYLSPIIPKTAQVIFEKLGTAPTTLTALSPDYDNLKPGTEVSIGGILFXKILTEEEXXXXXXXXXXXXXXXXXXXXXXXTPL--------------------------------------------------------------FASLDIRVGVISKVWKHPESDKLYCEEIDIGEEEPKQIASGLQAFYSLEEMQNRKVLVLLNLKPAKLGGFKSHGMVLCA-CDEAHKNVQFVEPPTDAKVGERVTIASESGE-----PLSAAQIKKQKVLEKVSPDFVTDDNCVATYKGEQIMTSAGACTA 718

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: XP_008916228.1 (methionine-tRNA ligase [Phytophthora parasitica INRA-310] >ETM53543.1 methionine-tRNA ligase [Phytophthora parasitica] >ETM98476.1 methionine-tRNA ligase [Phytophthora parasitica INRA-310])

HSP 1 Score: 662.9 bits (1709), Expect = 1.400e-186
Identity = 379/806 (47.02%), Postives = 496/806 (61.54%), Query Frame = 0

Query:   71 DKLIVMAIVEDPRAPLIGEPGVTLPGGPAAGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRA 876
            DKL V    +D R   + +    L     + E FY+TTAI+YTNG PH+GHAYE V +DVI+RY R+ G+ V+FLTGTDEHGQK+A TAE +G+TP +L DKYAG F+ L K L +SN+ F+RTT   H   AQ L+++     D+YL  Y GWYNVREE FVTE EA L D+KDP +G P KKM+E SYFF+MSKYQ +L+ HI+++P F+ PE RR  +L RL+E L DLS SR TF  GIP+ +   P+HVLYVWFDAL+NY++ I +        P    + +WPA VH+IGKDI WFHCVIWP ILMS G+PLP+ +FAHGF++ KDG KMSKS+GNVIDP+ MI+++ +++FRY++ +   FG D+ FS + ++  HNSELAD LGNLVHR VN+C+K+  G VP  K  +               P D+ E+        + FAL+     ++   +DTNK+LTE EPW MK +   E R  VVR  LEA+YVLAH+L+PI+P  A  IFEKLGT P  +  L  D  NL  G  VS+G ILF K+    E    XXXXXXXXXXXXXXXXXXX                                                                 F+ +DIRVG I +VW H  +D+L+CEEI++GE +P+Q+ASGL+  Y+LEEM  +KVLV+ NLK AKL GF+S GMVL A   +    V  VEPP +A VGERV + S   +     P++A Q+KK+K  E V     TD + VA ++G +++T+AG C A
Sbjct:   12 DKLEVAQQQQDAR---VEQLQTKLEAVKPSQETFYLTTAIHYTNGLPHMGHAYENVCADVISRYHRVFGRDVYFLTGTDEHGQKIAQTAEAAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGTYEGWYNVREEMFVTETEAQLTDYKDPTTGTPFKKMQEQSYFFKMSKYQDRLVKHIEENPEFLQPEVRRQELLRRLQEPLQDLSASRNTFTHGIPILND--PKHVLYVWFDALANYLSAIGY--------PDGPDARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGSKMSKSVGNVIDPYAMIEKYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNLVHRTVNICKKYSNGAVPEAKADK---------------PFDIYELLKYSEDSYKDFALQNACIAIVNALKDTNKYLTEKEPWHMKEN---EPRLVVVRTCLEAIYVLAHYLSPIIPKTAQVIFEKLGTAPTTLTALSPDYDNLKPGTEVSIGGILFNKILTEEEXXXXXXXXXXXXXXXXXXXXXXXTPL--------------------------------------------------------------FASLDIRVGVISKVWKHPESDKLYCEEIDIGEEEPKQIASGLQAFYSLEEMQNRKVLVLLNLKPAKLGGFKSHGMVLCA-CDEAHENVQFVEPPTDAKVGERVTIASESGE-----PLSAAQIKKQKVLEKVSPDFVTDDNCVATYKGEQIMTSAGACTA 718

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: ETP51799.1 (methionine-tRNA ligase [Phytophthora parasitica P10297])

HSP 1 Score: 662.9 bits (1709), Expect = 1.400e-186
Identity = 379/806 (47.02%), Postives = 496/806 (61.54%), Query Frame = 0

Query:   71 DKLIVMAIVEDPRAPLIGEPGVTLPGGPAAGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRA 876
            DKL V    +D R   + +    L     + E FY+TTAI+YTNG PH+GHAYE V +DVI+RY R+ G+ V+FLTGTDEHGQK+A TAE +G+TP +L DKYAG F+ L K L +SN+ F+RTT   H   AQ L+++     D+YL  Y GWYNVREE FVTE EA L D+KDP +G P KKM+E SYFF+MSKYQ +L+ HI+++P F+ PE RR  +L RL+E L DLS SR TF  GIP+ +   P+HVLYVWFDAL+NY++ I +        P    + +WPA VH+IGKDI WFHCVIWP ILMS G+PLP+ +FAHGF++ KDG KMSKS+GNVIDP+ MI+++ +++FRY++ +   FG D+ FS + ++  HNSELAD LGNLVHR VN+C+K+  G VP  K  +               P D+ E+        + FAL+     ++   +DTNK+LTE EPW MK +   E R  VVR  LEA+YVLAH+L+PI+P  A  IFEKLGT P  +  L  D  NL  G  VS+G ILF K+    E    XXXXXXXXXXXXXXXXXXX                                                                 F+ +DIRVG I +VW H  +D+L+CEEI++GE +P+Q+ASGL+  Y+LEEM  +KVLV+ NLK AKL GF+S GMVL A   +    V  VEPP +A VGERV + S   +     P++A Q+KK+K  E V     TD + VA ++G +++T+AG C A
Sbjct:   12 DKLEVAQQQQDAR---VEQLQTKLEAVKPSQETFYLTTAIHYTNGLPHMGHAYENVCADVISRYHRVFGRDVYFLTGTDEHGQKIAQTAEAAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGTYEGWYNVREEMFVTETEAQLTDYKDPTTGTPFKKMQEQSYFFKMSKYQDRLVKHIEENPEFLQPEVRRQELLRRLQEPLQDLSASRNTFTHGIPILND--PKHVLYVWFDALANYLSAIGY--------PDGPDARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGSKMSKSVGNVIDPYAMIEKYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNLVHRTVNICKKYSNGVVPEAKADK---------------PFDIYELLKYSEDSYKDFALQNACIAIVNALKDTNKYLTEKEPWHMKEN---EPRLVVVRTCLEAIYVLAHYLSPIIPKTAQVIFEKLGTAPTTLTALSPDYDNLKPGTEVSIGGILFNKILTEEEXXXXXXXXXXXXXXXXXXXXXXXTPL--------------------------------------------------------------FASLDIRVGVISKVWKHPGSDKLYCEEIDIGEEEPKQIASGLQAFYSLEEMQNRKVLVLLNLKPAKLGGFKSHGMVLCA-CDEAHENVQFVEPPTDAKVGERVTIASESGE-----PLSAAQIKKQKVLEKVSPDFVTDDNCVATYKGEQIMTSAGACTA 718

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: OQR84558.1 (methionyl-tRNA synthetase [Achlya hypogyna])

HSP 1 Score: 662.9 bits (1709), Expect = 1.400e-186
Identity = 371/787 (47.14%), Postives = 476/787 (60.48%), Query Frame = 0

Query:   99 AAGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKDP-FGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRALGMGEGNIR 885
            AA E FY+TTAI+Y+NG PHIGHAYE VT+DVIARY R  G+ V FLTGTDEHGQK+A TAE  GMTPI+LCDKY+G F+ L K L +SND F+RTT   H    Q ++ R  A  DIY   Y GWYNVREETFVTENEA L ++KDP SGL LKKM+E SYFF+MSKYQ +LIDH    P F+ PE+ R  IL RLEE L DLS SRTTF  GIP+PD   P+HV+YVWFDALSNY++ +++        PS +++ +WPA+VH+IGKDI WFH VIWP ILMSAG PLP+ +FAHGFI+ KDG KMSKS+GNVIDP+DM+ +  +D+FRY++ +   +G D+ FS + ++  HNS+LAD LGNLVHR + L  K+ +G VP                 T     D+  +RA   +  + + L+      +   ++TNK+LT+A PW M     A A+  VVR  LEA+Y+ AHF+AP MP  A  +F+KL T P  +  L +    L  G  + VG+ILF K+    E        XXXXXXXXXXXXXX                                                                  F+  DIRVG I +VW H  +D+LFCEEI+VG   P Q+ASGLR  YT + ++G+KVLV+ N+KAAKLAGF+S GMVL A   D +    L+EPPA A  GERV + +   D      ++  QMKK+K WE +     TD   VA ++GA + T AGPC+A  +   +I+
Sbjct:   30 AAAESFYITTAIHYSNGMPHIGHAYENVTADVIARYHRTYGRDVRFLTGTDEHGQKIAQTAEAQGMTPIQLCDKYSGLFQQLTKDLNMSNDDFIRTTSDRHKKFCQYIFARAQANGDIYKGTYEGWYNVREETFVTENEAALTNYKDPTSGLDLKKMQEESYFFKMSKYQQRLIDHFHAHPEFLQPETARQAILKRLEEPLLDLSASRTTFSHGIPLPDD--PKHVMYVWFDALSNYLSALDY--------PSGANAKYWPASVHIIGKDITWFHTVIWPCILMSAGFPLPKRVFAHGFINAKDGTKMSKSIGNVIDPYDMVAKVGLDSFRYFVVRGARYGADMPFSEDELVAMHNSDLADTLGNLVHRGLTLAVKYADGAVP---------------DATATPCFDVAALRAATEEAFKNYNLQDACVAFIEAVKETNKYLTDAAPWHMTD---AGAKLVVVRTVLEAIYIFAHFMAPFMPGTAAAVFDKLHTQPTTLTRLSSYFDTLTPGTPIGVGDILFQKVLSDVEKAALAAKKXXXXXXXXXXXXXXL-----------------------------------------------------------------FAACDIRVGTITKVWPHPDSDKLFCEEIDVGREAPVQIASGLRPFYTQDALLGRKVLVLLNIKAAKLAGFKSNGMVLCAVTDDAT---QLIEPPAAAVNGERVTIATEAGD-----AVSEGQMKKQKIWEKLAADFTTDAGAVATYKGAVVSTTAGPCKAASLANAHIK 715

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: ETI54003.1 (methionine-tRNA ligase [Phytophthora parasitica P1569] >ETK93851.1 methionine-tRNA ligase [Phytophthora parasitica] >ETL47245.1 methionine-tRNA ligase [Phytophthora parasitica] >ETM00350.1 methionine-tRNA ligase [Phytophthora parasitica] >ETO82688.1 methionine-tRNA ligase [Phytophthora parasitica P1976] >ETP23807.1 methionine-tRNA ligase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 662.5 bits (1708), Expect = 1.800e-186
Identity = 379/806 (47.02%), Postives = 496/806 (61.54%), Query Frame = 0

Query:   71 DKLIVMAIVEDPRAPLIGEPGVTLPGGPAAGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRA 876
            DKL V    +D R   + +    L     + E FY+TTAI+YTNG PH+GHAYE V +DVI+RY R+ G+ V+FLTGTDEHGQK+A TAE +G+TP +L DKYAG F+ L K L +SN+ F+RTT   H   AQ L+++     D+YL  Y GWYNVREE FVTE EA L D+KDP +G P KKM+E SYFF+MSKYQ +L+ HI+++P F+ PE RR  +L RL+E L DLS SR TF  GIP+ +   P+HVLYVWFDAL+NY++ I +        P    + +WPA VH+IGKDI WFHCVIWP ILMS G+PLP+ +FAHGF++ KDG KMSKS+GNVIDP+ MI+++ +++FRY++ +   FG D+ FS + ++  HNSELAD LGNLVHR VN+C+K+  G VP  K  +               P D+ E+        + FAL+     ++   +DTNK+LTE EPW MK +   E R  VVR  LEA+YVLAH+L+PI+P  A  IFEKLGT P  +  L  D  NL  G  VS+G ILF K+    E    XXXXXXXXXXXXXXXXXXX                                                                 F+ +DIRVG I +VW H  +D+L+CEEI++GE +P+Q+ASGL+  Y+LEEM  +KVLV+ NLK AKL GF+S GMVL A   +    V  VEPP +A VGERV + S   +     P++A Q+KK+K  E V     TD + VA ++G +++T+AG C A
Sbjct:   12 DKLEVAQQQQDAR---VEQLQTKLEAVKPSQETFYLTTAIHYTNGLPHMGHAYENVCADVISRYHRVFGRDVYFLTGTDEHGQKIAQTAEAAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGTYEGWYNVREEMFVTETEAQLTDYKDPTTGTPFKKMQEQSYFFKMSKYQDRLVKHIEENPEFLQPEVRRQELLRRLQEPLQDLSASRNTFTHGIPILND--PKHVLYVWFDALANYLSAIGY--------PDGPDARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGSKMSKSVGNVIDPYAMIEKYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNLVHRTVNICKKYSNGVVPEAKADK---------------PFDIYELLKYSEDSYKDFALQNACIAIVNALKDTNKYLTEKEPWHMKEN---EPRLVVVRTCLEAIYVLAHYLSPIIPKTAQVIFEKLGTAPTTLTALSPDYDNLKPGTEVSIGGILFNKILTEEEXXXXXXXXXXXXXXXXXXXXXXXTPL--------------------------------------------------------------FASLDIRVGVISKVWKHPESDKLYCEEIDIGEEEPKQIASGLQAFYSLEEMQNRKVLVLLNLKPAKLGGFKSHGMVLCA-CDEAHENVQFVEPPTDAKVGERVTIASESGE-----PLSAAQIKKQKVLEKVSPDFVTDDNCVATYKGEQIMTSAGACTA 718

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: OWZ24161.1 (Methionine-tRNA ligase [Phytophthora megakarya])

HSP 1 Score: 662.1 bits (1707), Expect = 2.300e-186
Identity = 369/777 (47.49%), Postives = 487/777 (62.68%), Query Frame = 0

Query:  100 AGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRA 876
            A E FY+TTAI+YTNG PH+GHAYE V SDVI+RY R+ G+ V+FLTGTDEHGQK+A TAE +G+TP EL DKYA  F+ L K L +SN+ F+RTT   H   +Q L+++     D+YL KY GWYNVREE FVTE EA L D+KDP +G P KKM+E SYFF+MSKYQ +LI H +++P FI PE RR  +L RL+E L DLS SR TF  GIP+ +   P+HV+YVWFDAL+NY++ I +        P   ++ +WPA+VH+IGKDI WFHCVIWP ILMS G+PLP+ +FAHGF++ KDG KMSKS+GNVIDP++MI ++ +++FRY++ +   FG D+ FS + ++  HNSELAD LGNLVHR VN+C+K+  G VP  K  +               P D+ E+        + FAL+     ++   +DTNK+LTE EPW MK +   E R  VVR  LEA+YVL H+L+PI+P  +  IF+KLGT P  +  L  D  NL  G  VS+G+ILF K+                                                                 XXXXXXXXXXXXXXXX      V  P  F+ +DIRVG I +VW H  +++L+CEEI++GE +P+Q+ASGL+  Y+LEEM  +KVLV+ NLK AKL GF+S GMVL AS  +    V  VEPPA+A  GERV++ S   +     P++A Q+KK+K  E V     T+   VA ++G +++T+AGPC A
Sbjct:   38 ARESFYLTTAIHYTNGLPHMGHAYENVCSDVISRYHRVFGRDVYFLTGTDEHGQKIAQTAEAAGVTPQELVDKYANIFQQLTKDLNMSNNNFIRTTSDVHKKFSQWLFQQALDKGDVYLGKYEGWYNVREEMFVTETEAQLTDYKDPTTGTPFKKMQEESYFFKMSKYQDRLIKHYEENPDFIQPEVRRQELLRRLKEPLQDLSASRNTFTHGIPLLND--PKHVMYVWFDALANYLSAIGY--------PDGPNARYWPASVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGSKMSKSVGNVIDPYEMISKYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNLVHRTVNICKKYSNGVVPDAKADK---------------PFDIYELLKYSEDSYKDFALQSACIAIVNALKDTNKYLTEKEPWHMKEN---EPRLVVVRTCLEAIYVLGHYLSPILPLTSETIFKKLGTAPTTLTALSPDYDNLKPGTEVSIGDILFNKI-------------------------------------------------------------LTEEXXXXXXXXXXXXXXXXXXXXAKVTTP-LFASLDIRVGVISKVWKHPESEKLYCEEIDIGEEEPKQIASGLQAFYSLEEMQNRKVLVLLNLKPAKLGGFKSHGMVLCAS-DEAHENVQFVEPPADAKTGERVSIASESGE-----PLSAAQVKKQKVLEKVSPDFLTNDSCVATYKGEQIMTSAGPCTA 718

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: XP_009832172.1 (methionine-tRNA ligase [Aphanomyces astaci] >ETV78591.1 methionine-tRNA ligase [Aphanomyces astaci])

HSP 1 Score: 659.8 bits (1701), Expect = 1.200e-185
Identity = 362/780 (46.41%), Postives = 464/780 (59.49%), Query Frame = 0

Query:  102 ERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALP-IDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGA---TVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVG-EGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRA 876
            E+FY+TTAI+YTNG PH+GHAYE VTSDVIARY R  G+ VFFLTGTDEHGQK+A TAE  G+TPI LCDKY+G F+ L K L +SND F+RTT  +H   AQ ++ +  A  DIY   Y GWYNVREETFVTENEA L DFKDP +G PLKKM+E+SYFFRMSKYQ +LI H   +P F+ PE+ R  IL RLEE L DLS SRTTF  G+P+P+   P+HV+YVWFDALSNY++GI+ + +     P+ + S +WPA+VHVIGKDI WFHCVIWP ILMSAG PLP  +FAHGF++ +DG KMSKS+GNV+DP+DMI ++ +D+FRY+L +   +G D+ FS +     HN+EL D LGNLVHR + L  K+  G VP +                 A P  D+  ++    +  + +AL+      +   R TN +LT A PW M  D    A++ VVR  LEA+YV AHF+ P MP  A+ +F  L TPP  +P L +D  NL  G     V+  +ILF KL+   E                                                                             A+      P  F+  DIRVG I++ WHH  +D+LFCEEI+VG E  P Q+ASGLR  Y+L EM G++ LV+ N+KAAKL GF+S GMVL AS ++    V  VEPPA A  GERV + +   D     P++  QMKK+K WE +   LKTD    A ++G  + T+AGP  A
Sbjct:   33 EKFYITTAIHYTNGQPHMGHAYENVTSDVIARYHRTYGRDVFFLTGTDEHGQKIAQTAEAQGVTPIALCDKYSGIFQKLAKDLNMSNDHFIRTTSKQHIDFAQFIFGKAEANGDIYKGTYEGWYNVREETFVTENEAQLIDFKDPTTGTPLKKMQESSYFFRMSKYQERLIAHYHANPTFLQPETHRQSILKRLEEPLLDLSASRTTFRHGVPLPND--PDHVMYVWFDALSNYLSGIDGINY-----PNGALSKYWPASVHVIGKDITWFHCVIWPCILMSAGFPLPTRVFAHGFVNARDGTKMSKSIGNVVDPYDMIHKYGVDSFRYFLVRGAKYGSDMPFSEDEFFNIHNAELNDTLGNLVHRGLALSVKYAHGHVPDVP----------------ATPCFDVVALKTATEEAFQSYALQEAVFRFIEVVRATNGYLTTAAPWHMTDD---HAKQVVVRTILEAIYVFAHFMIPFMPATASRVFGFLHTPPTTLPLLSSDFNNLVPGTPIKNVTKDDILFEKLKSEAE-------------------------------------------------------------LAALASKQATAAPPPAAKKAKEDLP-LFASCDIRVGTIIKAWHHPDSDKLFCEEIDVGLESGPVQIASGLRPFYSLAEMTGRRCLVLLNIKAAKLGGFKSNGMVLCAS-SEAHDVVEFVEPPAGAVNGERVFIATESGD-----PVSEGQMKKQKVWEKLSADLKTDDHRQATYKGQVIQTSAGPVLA 718

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: XP_002904023.1 (methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4] >EEY54201.1 methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 659.4 bits (1700), Expect = 1.500e-185
Identity = 374/814 (45.95%), Postives = 498/814 (61.18%), Query Frame = 0

Query:   71 DKLIVMAIVEDPRAPLIGEPGVTLPGGPAAGERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKD-PFGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRALGMGEGNI 884
            DKL V    +D R   + +    L     + E FY+TTAI+YTNG PH+GHAYE V SDVI RY R+ G+ V+FLTGTDEHGQK+A TAE +G+TP +L DKYAG F+ L K L +SN+ F+RTT   H   AQ L+++     D+YL  Y GWYNVREE FVTE EA L D+KDP +G   KKM+E SYFF+MSKYQ +L+ HI+++P F+ PE RR  +L RL+E L DLS SR TF  G+P+ +   P+HVLYVWFDAL+NY++ I +        P    + +WPA VH+IGKDI WFHCVIWP ILMS G+PLP+ +FAHGF++ KDG KMSKS+GNVIDP+ MI+R+ +++FRY++ +   FG D+ FS + ++  HNSELAD LGNLVHR VN+C+K+  G VP+ K  +               P D+ E+        + F+L+     ++   +DTNK+LTE EPW MK +   E R  VVR  LEA+YVLAH+L+ I+P  A  IF+KLGTPP  +  L  +  NL  G  VS+G ILF K+    E    XXXXXXXXXXXXXX                                                              V  A P  F+ +D+RVG I + W H  +D+L+CEEI++GE +P+Q+ASGL+  Y+LEEM  +KVLV+ NLK AKL GF+S GMVL A   +    V  VEPPA+A VGERV + S   +     P++A Q+KK+K  E V+    TD++ VA ++G +++T+AG C A  + +  I
Sbjct:   12 DKLEVAQQQQDAR---VEQLQTKLEASKPSRETFYLTTAIHYTNGLPHMGHAYENVCSDVICRYHRVFGRDVYFLTGTDEHGQKIAQTAEAAGVTPQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGTYEGWYNVREEMFVTETEAQLTDYKDPTTGTSFKKMQEQSYFFKMSKYQDRLVKHIEENPDFLQPEVRRQELLRRLKEPLQDLSASRNTFAHGVPILND--PKHVLYVWFDALANYLSAIGY--------PDGPEARYWPANVHIIGKDITWFHCVIWPCILMSTGIPLPKRVFAHGFVNAKDGSKMSKSVGNVIDPYAMIERYGLESFRYFIVRSAKFGQDMPFSEDDLINIHNSELADTLGNLVHRTVNICKKYSNGVVPLAKADK---------------PFDIYELLKYSEDSYKDFSLQNACIAIVNTLKDTNKYLTEKEPWHMKEN---EPRLVVVRTCLEAIYVLAHYLSAIIPQTAQIIFDKLGTPPTTLTALSPEYDNLKPGTEVSIGGILFNKILTEEEKHXXXXXXXXXXXXXXXXL-------------------------------------------------------------VKPATP-LFASLDVRVGVISKAWKHPESDKLYCEEIDIGEEEPKQIASGLQSFYSLEEMQNRKVLVLLNLKPAKLGGFKSHGMVLCA-CDEAHENVQFVEPPADAKVGERVTIASESGE-----PLSAAQIKKQKVLEKVLPDFVTDENCVATYKGEQIMTSAGLCTAKSLKKAYI 726

[Close]

BLAST of NO01G04580 vs. NCBI_GenBank
Match: CCA17292.1 (methionyltRNA synthetase of possible bacterial origi (ISS) putative [Albugo laibachii Nc14])

HSP 1 Score: 659.1 bits (1699), Expect = 2.000e-185
Identity = 357/785 (45.48%), Postives = 466/785 (59.36%), Query Frame = 0

Query:  102 ERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDEHGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHHISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGLPLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELTDLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLPSPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHDKDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKDP-FGGDISFSPEAMLQAHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYALPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGDEMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLRADLRNLDVGATVSVGNILFMKLEGAGEGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAEGVDVAYPD--DFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKPRQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGSGKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEGLKTDQDGVAMFRGARLVTAAGPCRALGMGEGNI 884
            E+FY+TTAI+YTNG PH+GHAYE VT+DVIARY R+ G+ V+FLTGTDEHGQK+A TAE  G+ P ELCDKYA  FR L   L +SN  F+RTT  +H + AQ L++R     DIYL  Y GWYNVREE FVTE EA  +++KDPVSG+PLKKM E SYFFRMSKYQ +L+DH    P F+ PE+RR  I+ RLEE L DLS SR TF  GIP+P+     HVLYVWFDAL+NY++ I + +          +  +WPA VH+IGKDI WFHCVIWP ILMS  +PLP+ +FAHGF++ KDG KMSKS+GNV+DP+D++ +F +++FRY+L +   +G D  FS   ++  HNSELAD LGNLVHR VN+C+K+ +G VP    L   +            P D   + ++       FAL+     V+   RD N++LT+  PW M     + +R  VVR  LEA+Y+LAHFLAP +P  +  IFEKLGTPPQ +  L     NL  G  V VG+ILF K+  A E                                                                             + G+     D   F+ +DIRVG IV+VW H  +D LFCEEIE+GE   +Q+ASGLR+ Y LEEM  +KVL + NLK  KL GF+S GMVL AS  +   +V  VEPP++A  G+RV +++   D     P++A Q+KK+K WE     L T+ +G+A +RG  + T AG C+A  +   +I
Sbjct:   49 EKFYLTTAIHYTNGQPHMGHAYENVTADVIARYHRIFGRNVYFLTGTDEHGQKIAQTAEALGIAPKELCDKYAAIFRQLTLDLNMSNSSFIRTTSEKHKVFAQWLFQRALNKGDIYLGTYEGWYNVREEVFVTEVEAQQSEYKDPVSGIPLKKMREESYFFRMSKYQQRLVDHFHAHPEFLQPETRRQEIMKRLEEPLQDLSSSRNTFSHGIPLPND--SNHVLYVWFDALANYLSAIGFPD-------QVEAKTYWPANVHIIGKDITWFHCVIWPCILMSTEIPLPKRVFAHGFVNAKDGMKMSKSIGNVVDPYDIMNKFGLESFRYFLVRSARYGQDWPFSENDLINIHNSELADTLGNLVHRTVNICKKYSDGVVP--NTLSPDR------------PFDFITLLSQSEDAYRDFALQSAVILVIEALRDVNRYLTDKAPWHMTD---SASRLIVVRTCLEAIYLLAHFLAPFIPKTSETIFEKLGTPPQKLIELSPAFDNLVPGTEVLVGDILFQKVLTAEE-------------------------------------------------------------ILQAEESSKKKAKGSASVGIKPKKNDLQLFASLDIRVGQIVKVWPHPDSDELFCEEIEIGEADTKQIASGLRKFYKLEEMQNRKVLALLNLKPVKLRGFKSYGMVLCAS-DEAHERVEFVEPPSDAEAGDRVVIDTENGD-----PLSAAQLKKQKVWEKASVDLYTNAEGIATYRGQVIKTPAGVCQAKTLKNAHI 740

The following BLAST results are available for this feature:

BLAST of NO01G04580 vs. NCBI_GenBank

BLAST of NO01G04580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CCI41122.1	1.000e-189	45.59	unnamed protein product [Albugo candida]	[more]
KUF65279.1	1.000e-186	47.02	Methionine--tRNA ligase [Phytophthora nicotianae]	[more]
XP_008916228.1	1.400e-186	47.02	methionine-tRNA ligase [Phytophthora parasitica IN...	[more]
ETP51799.1	1.400e-186	47.02	methionine-tRNA ligase [Phytophthora parasitica P1...	[more]
OQR84558.1	1.400e-186	47.14	methionyl-tRNA synthetase [Achlya hypogyna]	[more]
ETI54003.1	1.800e-186	47.02	methionine-tRNA ligase [Phytophthora parasitica P1...	[more]
OWZ24161.1	2.300e-186	47.49	Methionine-tRNA ligase [Phytophthora megakarya]	[more]
XP_009832172.1	1.200e-185	46.41	methionine-tRNA ligase [Aphanomyces astaci] >ETV78...	[more]
XP_002904023.1	1.500e-185	45.95	methionyl-tRNA synthetase, putative [Phytophthora ...	[more]
CCA17292.1	2.000e-185	45.48	methionyltRNA synthetase of possible bacterial ori...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL005	nonsL005	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR047	ncniR047	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR091	ngnoR091	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK007817	NSK007817	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO01G04580.1	NO01G04580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|523755	gene_478	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
MetRS	gene1243	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO01G04580.1	NO01G04580.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO01G04580 ID=NO01G04580|Name=NO01G04580|organism=Nannochloropsis oceanica|type=gene|length=3415bp
CGCCAAGCGCCGTGCGCTGCCTGTGATGCGTGGGAAGACGAGGTGATGCA
TATGAAGGCGCGTGTGCCAAGCAGGGATGTGTGAAGGGAAGCATCGGCGA
CGCTTTCGCTCGATTTGCATTATGCCTTGCTTCCACACGTTTGCAAGTCC
ACCTAATAAATACTCAAGCGCGACACACATGCCTCGCTCCTTTCTTCTAC
TCGATTTGCTCGGTCTCATCATCTTCTGTCACTCTCACGATTTTCCCCCA
TAACTGACGCAGGAGCAAACATCGTCGAGGCCTTCACGTCACATACCCAC
AGCCGCACACGCCCTCGCTGGCCGAATGAACACTCCATCCAAGGGCCTGG
ATCCAGACGGCCTGGCCTTCATTGCTGCTGATGAGGCCTCAAGCACTCTT
CACTTGCACCTCGCGAGCCTTGGCCTCCTTCCGTCCGCTGCCACCACCAC
CACAACCACCATCCTTAATCCCGCTGCTGCGGGTGCCACTGCTGCTGCAG
CAGCTAGCAAGGGTCGAGGGCGTGGCAAAACTGGGGACAAACTCATCGTA
ATGGCGATTGTCGAAGACCCCAGAGCTCCGTTGATAGGCGAGCCAGGCGT
GACCTTGCCAGGGGGTCCCGCGGCGGGGGAGCGCTTTTATGTCACCACGG
CGATCAACTACACCAACGGCAACCCCCACATCGGCCATGCCTACGAAGCT
GTGACTTCTGATGTCATTGCTCGATATCAACGCATGGTGGGAAAACAGGT
TTTTTTTCTTACGGGCACGGACGAGCATGGGCAGAAGGTTGCGACGACGG
CGGAGGGGTCGGGGATGACACCTATAGAATTGTGTGATAAATATGCAGGG
AATTTCCGGGCCTTGAATAAATGCTTGCGGATTTCGAACGACTTTTTCGT
AAGAACCACCATGCCAGAGCATCACATCTCGGCGCAGGAATTGTGGAAGC
GATGTGCGGCAGCGGACGACATTTATTTGAGgtgagctctgagaagaggg
agggaggaagggagggaaggagggaaggaaggatggaggaagcccagcac
ccatattgtcttggaagaaacatgtatttcgtatcacttttaagaacatc
gtatcgtaacccgcagtcttgactcaaccctccatcctttcccctgctct
ccccaccttactcctatgctaacagTAAATACACGGGATGGTACAACGTC
CGCGAGGAAACTTTCGTCACGGAGAACGAGGCCATGCTCGCCGATTTCAA
GGACCCTGTTTCGGGCCTCCCTCTGAAAAAAATGGAGGAGACATCCTACT
TCTTCCGCATGTCCAAGTACCAGGCCCAATTGATCGATCACATTCAAAAA
TCGCCCGCTTTTATCTTGCCTGAGAGCCGGCGGAATCTGATCTTGGCACG
GCTGGAGGAGGAGCTGACGGACTTGAGTGTCTCGAGAACGACCTTCGATT
GGGGGATTCCCGTGCCAGACGGATTCGTGCCGGAGCACGTGCTGTATGTG
TGGTTTGATGCCTTGAGCAATTACATGACGGGGATAAATTGGTTGGAGTT
TGAGTCGTCCACCCTCCCTTCCCCGTCCTCGTCGGCGTTCTGGCCAGCGA
CGGTGCATGTCATTGGGAAGGACATTATTTGGTTCCATTGTGTCATTTGG
CCGACGATTCTAATGAGTGCTGGGCTGCCTTTGCCGAGATCGATATTTGC
ACACGGATTTATTCATGACAAGGATGGAAGGAAGATGAGgtgagtgagcg
tgatgatcaatggaagggaggaacggagagaggagggagggagagagtgg
ggatctgttgattgtcgtagcagcgtgtacccacccctacctctctccct
acctctttcccttcctccctccccctctccatcctcccttccctctgtat
tcagTAAATCCCTGGGCAATGTAATAGACCCGCATGACATGATAAAGCGT
TTCCCGATCGACACCTTCCGGTATTACCTGACCAAGGACCCATTTGGAGG
CGATATCTCGTTCTCGCCCGAGGCGATGCTGCAAGCCCACAACAGCGAGC
TGGCCGACGTTTTGGGGAACCTGGTTCATCGAGCGGTTAATTTGTGTCAG
AAATTCTGCGAGGGAAAGGTGCCAGTGTTAAAGTGTCTGGAAGGCGGGAA
AGGGGGAGGAAAGGAAGGGGGTTGGACTTACGCGCTGCCGATTGATTTAG
AAGAGATGAGGGCGAAGGTGGCGAAAGGAATGGAGGGCTTTGCGCTGAAG
GTGCTTTCGGACGAGGTAATGGGTGGGTTTCGGGATACGAATAAATTCCT
GACCGAAGCGGAACCTTGGAAGATGAAGGGAGACGAGATGGCGGAGGCAC
GGAGGGAAGTGGTGCGGTTGACGCTGGAAGCCGTTTATGTGCTGGCGCAT
TTCTTGGCCCCGATCATGCCTTATGCCGCGACGGAGATCTTTGAAAAGCT
AGGGACGCCACCGCAGCCCATCCCTACCCTTCGGGCAGATTTGCGGAATT
TGGATGTGGGAGCCACAGTGTCGGTGGGCAATATTTTGTTTATGAAGCTT
GAGGGAGCAGGGGAGGGAAAGGGAGAGGGAGGGGGAATGGTGTTGGTGGA
TGGAAAGCCGCCTAAGGAGGAGAAGGAGGGGAATGGGAAGAAGGCAAAGC
AACCGGCCGCGGCTGGGAAAGAGGAAGGTAAAGGGGGAAAGAAGAAGGGA
GGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAGGGGGGGATCGCTG
AGGGAGTGGACGTTGCTTACCCTGATGATTTTAGCAAGGTGGATATCCGC
GTGGGAGGGATCGTGAGGGTGTGGCACCATGAGGCAGCGGACCGGCTGTT
TTGTGAGGAGATAGAGGTCGGGGAGGGGAAACCGCGGCAGGTTGCCTCGG
GTCTCCGAGAACATTATACTTTGGAGGAGATGGTGGGGAAGAAGGTCTTA
GTGGTGTGTAATTTGAAGGCAGCCAAGCTGGCGGGATTTGAGAGTCAGGG
CATGGTGCTTGCCGCATCTCTGACGGATGGCTCGGGGAAGGTGGTACTTG
TCGAACCACCGGCCGAGGCGACGGTGGGGGAGAGGGTGGCTGTTGAAAGT
GCGAGGTATGATATGTCACAGTATCCGCCGATGACCGCGACGCAGATGAA
GAAGAAAAAGGCTTGGGAGGCGGTCGTGGAGGGGTTGAAGACAGATCAGG
ATGGAGTGGCGATGTTTAGAGGGGCGAGACTGGTCACGGCGGCGGGGCCG
TGCCGAGCGCTGGGCATGGGGGAGGGGAATATCAGATGAAGAAGGAAGCT
AGGACGGGGAAGTGTGTTAGAAGGTGAAAGTGCATTGAAAGAATGATTTG
GAGATTCGTTATTTT

protein sequence of NO01G04580.1

>NO01G04580.1-protein ID=NO01G04580.1-protein|Name=NO01G04580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=885bp
MNTPSKGLDPDGLAFIAADEASSTLHLHLASLGLLPSAATTTTTTILNPA
AAGATAAAAASKGRGRGKTGDKLIVMAIVEDPRAPLIGEPGVTLPGGPAA
GERFYVTTAINYTNGNPHIGHAYEAVTSDVIARYQRMVGKQVFFLTGTDE
HGQKVATTAEGSGMTPIELCDKYAGNFRALNKCLRISNDFFVRTTMPEHH
ISAQELWKRCAAADDIYLSKYTGWYNVREETFVTENEAMLADFKDPVSGL
PLKKMEETSYFFRMSKYQAQLIDHIQKSPAFILPESRRNLILARLEEELT
DLSVSRTTFDWGIPVPDGFVPEHVLYVWFDALSNYMTGINWLEFESSTLP
SPSSSAFWPATVHVIGKDIIWFHCVIWPTILMSAGLPLPRSIFAHGFIHD
KDGRKMSKSLGNVIDPHDMIKRFPIDTFRYYLTKDPFGGDISFSPEAMLQ
AHNSELADVLGNLVHRAVNLCQKFCEGKVPVLKCLEGGKGGGKEGGWTYA
LPIDLEEMRAKVAKGMEGFALKVLSDEVMGGFRDTNKFLTEAEPWKMKGD
EMAEARREVVRLTLEAVYVLAHFLAPIMPYAATEIFEKLGTPPQPIPTLR
ADLRNLDVGATVSVGNILFMKLEGAGEGKGEGGGMVLVDGKPPKEEKEGN
GKKAKQPAAAGKEEGKGGKKKGGGGRGGGGGGGGGGGGGGGGGGGGGGGG
KGGIAEGVDVAYPDDFSKVDIRVGGIVRVWHHEAADRLFCEEIEVGEGKP
RQVASGLREHYTLEEMVGKKVLVVCNLKAAKLAGFESQGMVLAASLTDGS
GKVVLVEPPAEATVGERVAVESARYDMSQYPPMTATQMKKKKAWEAVVEG
LKTDQDGVAMFRGARLVTAAGPCRALGMGEGNIR*

Synonyms

Publications