NO01G04520, NO01G04520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04520 vs. NCBI_GenBank
Match: EWM29382.1 (peroxisomal membrane protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 387.9 bits (995), Expect = 3.300e-104 Identity = 192/262 (73.28%), Postives = 214/262 (81.68%), Query Frame = 0 Query: 79 HDRRTCSRM---AMLTLLACTTTAFLTPSPRQISLPLIRRPHQQRSKGTLSAVDANDLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDEGPSSQNMTSET 338 H RR + A+L LL + AF TP+ RQ P+IRR RS+G LSAVDANDLFQGYMGLIHTHPL+TKCATSA IVPLGDLSAQ IET+KAK+ K ++ +D+ IDWKR +RFLIFGATLQPIWNHYYFQWFD LIPPP+DP+S+TNVLKV LDQGIQAPIFTV+IFAYLD LEGKNL+ETK QIKRDFWPCITTNWWVWIPIT NY F+PPDLRVLFVNVAFLGWCVFLSLLVNKKD P+SQ SE+ Sbjct: 4 HTRRDAHLLRMAAVLLLLFGGSQAFFTPA-RQSLRPVIRR--SSRSRGALSAVDANDLFQGYMGLIHTHPLITKCATSAMIVPLGDLSAQAIETYKAKQTG---AKGNDEEEDLGIDWKRVLRFLIFGATLQPIWNHYYFQWFDHLIPPPSDPISLTNVLKVALDQGIQAPIFTVVIFAYLDLLEGKNLEETKAQIKRDFWPCITTNWWVWIPITCANYAFVPPDLRVLFVNVAFLGWCVFLSLLVNKKDGEPTSQTRPSES 259
BLAST of NO01G04520 vs. NCBI_GenBank
Match: XP_005852786.1 (peroxisomal membrane protein 2 [Nannochloropsis gaditana CCMP526] >XP_005855479.1 peroxisomal membrane protein 2 [Nannochloropsis gaditana CCMP526] >EKU20881.1 peroxisomal membrane protein 2 [Nannochloropsis gaditana CCMP526] >EKU23046.1 peroxisomal membrane protein 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 309.3 bits (791), Expect = 1.500e-80 Identity = 143/182 (78.57%), Postives = 158/182 (86.81%), Query Frame = 0 Query: 156 IVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDEGPSSQNMTSET 338 IVPLGDLSAQ IET+KAK+ K ++ +D+ IDWKR +RFLIFGATLQPIWNHYYFQWFD LIPPP+DP+S+TNVLKV LDQGIQAPIFTV+IFAYLD LEGKNL+ETK QIKRDFWPCITTNWWVWIPIT NY F+PPDLRVLFVNVAFLGWCVFLSLLVNKKD P+SQ SE+ Sbjct: 2 IVPLGDLSAQAIETYKAKQTG---AKGNDEEEDLGIDWKRVLRFLIFGATLQPIWNHYYFQWFDHLIPPPSDPISLTNVLKVALDQGIQAPIFTVVIFAYLDLLEGKNLEETKAQIKRDFWPCITTNWWVWIPITCANYAFVPPDLRVLFVNVAFLGWCVFLSLLVNKKDGEPTSQTRPSES 180
BLAST of NO01G04520 vs. NCBI_GenBank
Match: XP_002176518.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50981.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 180.6 bits (457), Expect = 7.900e-42 Identity = 98/246 (39.84%), Postives = 140/246 (56.91%), Query Frame = 0 Query: 89 MLTLLACTTTAF-LTPSPRQISLPLIRRPHQQR----SKGTL---SAVDANDLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDE 327 +L L C+T A+ TPS P +QR SK T S + + + Y G + +PL+ K T+ I+ DL+ Q +E ++ K+ E +E L++ IDW R+ RF IFG LQ WNH+Y+ DG IPP +P + TN +KV +DQ +QAPIFTV+IF +L LEGK K+Q+ D+ I NW +W+P T +N F+PP RVL++N F W ++LSL +NKKDE Sbjct: 6 LLPLALCSTVAWAFTPS----------SPTRQRIGRASKSTSFTGSNLGPAEAWSAYNGALEANPLIVKSVTAGIILGAADLAGQTLEDFQKKQ----EGDAQEALEEFGIDWLRSARFAIFGLVLQAPWNHFYYLALDGQIPPTTEPFTTTNGIKVLIDQFVQAPIFTVLIFVFLGTLEGKTPSAIKNQLNNDYKDTILANWKLWLPATVINIGFVPPLFRVLYLNGVFFFWSIYLSLKLNKKDE 237
BLAST of NO01G04520 vs. NCBI_GenBank
Match: XP_002288337.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED93773.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 175.3 bits (443), Expect = 3.300e-40 Identity = 86/195 (44.10%), Postives = 117/195 (60.00%), Query Frame = 0 Query: 132 DLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDE 327 +++ Y+ + + PLL K T+ I+ DLS Q I+ AK A + D +D R +RF FG LQ WNH+Y+ DG +PP DP + T +KV +DQ IQAPIFTVIIFA+L FLEGK ++E K Q+ D+ + NW +W+P T +N F PP LRVLF+NV F W +FLSL +NK +E Sbjct: 4 EVWTSYLNALESDPLLVKSVTAGVILGAADLSGQAIQQSLAK----ANSDDATTITDSGVDIARFLRFAFFGFILQAPWNHFYYLLLDGALPPTPDPFTATTGIKVLVDQFIQAPIFTVIIFAFLGFLEGKTVEEIKKQLDDDYVDTMLANWKLWVPATAVNIAFCPPILRVLFLNVVFFFWSIFLSLKLNKTEE 194
BLAST of NO01G04520 vs. NCBI_GenBank
Match: GAX22361.1 (peroxisomal membrane protein 2 [Fistulifera solaris]) HSP 1 Score: 175.3 bits (443), Expect = 3.300e-40 Identity = 82/198 (41.41%), Postives = 123/198 (62.12%), Query Frame = 0 Query: 132 DLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDEGPS 330 + + Y + T PL+TK T++ I+ DL+ Q +E ++K ++ SIDW R+ RF FG LQ WNH+Y+ DG++PP DP + TN LKV +DQG+QAP+FT++IF +L LEGK L+ + Q+++D+ + NW V+IP T +N F+PP RVLF+N+ F GW ++LSLL+NK + S Sbjct: 5 EAWAAYNTALQTDPLITKSITASVILGAADLTGQALEN-RSKISS-------------SIDWARSARFAFFGLVLQAPWNHFYYLLLDGVLPPTEDPFTATNFLKVVIDQGLQAPLFTILIFVFLGALEGKQLEAIQQQLQKDYKNTMLANWKVFIPATAINIGFVPPIFRVLFLNLVFFGWSIYLSLLLNKDESEQS 188
BLAST of NO01G04520 vs. NCBI_GenBank
Match: GAX10234.1 (peroxisomal membrane protein 2 [Fistulifera solaris]) HSP 1 Score: 175.3 bits (443), Expect = 3.300e-40 Identity = 81/196 (41.33%), Postives = 123/196 (62.76%), Query Frame = 0 Query: 128 VDANDLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNK 324 + + + Y + T PL+TK T++ I+ DL+ Q +E ++K ++ +IDW R+ RF FG LQ WNH+Y+ DG++PP DP + TN +KV +DQG+QAP+FT++IF +L LEGK L+ + Q+++D+ + TNW V+IP T +N F+PP RVLF+NV F GW ++LSLL+NK Sbjct: 45 IGPEEAWAAYNTALQTDPLVTKSITASVILGAADLTGQALEN-RSKVSS-------------TIDWARSARFAFFGLVLQAPWNHFYYLLLDGVLPPTEDPFTATNFVKVVIDQGLQAPLFTILIFVFLGALEGKQLEAIQQQLQKDYKNTMLTNWKVFIPATVINIGFVPPIFRVLFLNVVFFGWSIYLSLLLNK 226
BLAST of NO01G04520 vs. NCBI_GenBank
Match: CEL98403.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 173.7 bits (439), Expect = 9.600e-40 Identity = 82/200 (41.00%), Postives = 119/200 (59.50%), Query Frame = 0 Query: 132 DLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDEGPSSQ 332 DL+ GY+ + PLLTKC TS I+P D++AQ+I EK + ID+ R R+L G L WNHY++ + D +PPP +P+S N L++ LDQ +QAP+FT + FA L LEG N Q +D++ RD+W + TNW VW+P + +N F+P L++L+VNV F W +FLS++ N +D P Q Sbjct: 15 DLWGGYLSSLDAQPLLTKCLTSGVILPAADIAAQLI------------EKRGDPSAPRGIDFTRTSRWLAAGFLLHAPWNHYWYNFLDARVPPPTEPLSGINFLRLALDQFLQAPVFTALFFAVLQLLEGANTQGVRDKLSRDWWSTMKTNWVVWLPASFINLAFVPTALKLLYVNVVFYFWSIFLSIVAN-RDVEPQKQ 201
BLAST of NO01G04520 vs. NCBI_GenBank
Match: AND95685.1 (Peroxisomal membrane protein 2, partial [Vitrella brassicaformis]) HSP 1 Score: 173.7 bits (439), Expect = 9.600e-40 Identity = 82/200 (41.00%), Postives = 119/200 (59.50%), Query Frame = 0 Query: 132 DLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDEGPSSQ 332 DL+ GY+ + PLLTKC TS I+P D++AQ+I EK + ID+ R R+L G L WNHY++ + D +PPP +P+S N L++ LDQ +QAP+FT + FA L LEG N Q +D++ RD+W + TNW VW+P + +N F+P L++L+VNV F W +FLS++ N +D P Q Sbjct: 97 DLWGGYLSSLDAQPLLTKCLTSGVILPAADIAAQLI------------EKRGDPSAPRGIDFTRTSRWLAAGFLLHAPWNHYWYNFLDARVPPPTEPLSGINFLRLALDQFLQAPVFTALFFAVLQLLEGANTQGVRDKLSRDWWSTMKTNWVVWLPASFINLAFVPTALKLLYVNVVFYFWSIFLSIVAN-RDVEPQKQ 283
BLAST of NO01G04520 vs. NCBI_GenBank
Match: OEU08850.1 (hypothetical protein FRACYDRAFT_143441, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 168.3 bits (425), Expect = 4.000e-38 Identity = 81/187 (43.32%), Postives = 111/187 (59.36%), Query Frame = 0 Query: 137 YMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNK 324 Y + T PLLTK T+ I+ DL+ Q ++ K D+ ID R RF FG LQ WNH+Y+Q DG IPP A+P + T +K +DQ +QAPIFTVIIFA+L FLEGK+++ K+Q+ D+ + NW +W+P T +N F+PP LRVL++N F W +FLSL +NK Sbjct: 4 YNDALITSPLLTKSVTAGIILGAADLAGQAVQ-------------DKISGDETEIDIARTARFAFFGLVLQAPWNHFYYQLLDGSIPPTAEPWTSTTAIKTAIDQFVQAPIFTVIIFAFLGFLEGKSVEAIKNQLDEDYKDTMVANWKLWVPATVINIAFVPPILRVLYLNCVFFFWSIFLSLKLNK 177
BLAST of NO01G04520 vs. NCBI_GenBank
Match: EJK46313.1 (hypothetical protein THAOC_35020 [Thalassiosira oceanica]) HSP 1 Score: 166.8 bits (421), Expect = 1.200e-37 Identity = 85/221 (38.46%), Postives = 120/221 (54.30%), Query Frame = 0 Query: 111 PLIRRPHQQRSKGTLSAVDANDLFQGYMGLIHTHPLLTKCATSACIVPLGDLSAQVIETWKAKKAALAEEKPKEDLDDMSIDWKRAVRFLIFGATLQPIWNHYYFQWFDGLIPPPADPVSMTNVLKVTLDQGIQAPIFTVIIFAYLDFLEGKNLQETKDQIKRDFWPCITTNWWVWIPITTLNYVFIPPDLRVLFVNVAFLGWCVFLSLLVNKKDEGPSSQ 332 P+++R Q + +L ++ Y+ + PLL K T+ I+ DL+ Q I++ D D +D R RF FG LQ WNH Y+ DG +PP DP + T +KV +DQ +QAPIFTVIIFA+L FLEGK +E K Q+ D+ + NW +W+P T +N F PP LRVLF+N F W +FLSL +NK ++ S+ Sbjct: 54 PMLQRSRQPTT--SLEFAGLEGAWESYLDALEADPLLVKSVTAGVILGAADLAGQAIQS-------------TNDEDSGGVDIARFARFAFFGFILQAPWNHAYYLLLDGALPPTEDPFTATTGVKVLIDQFVQAPIFTVIIFAFLGFLEGKTSEEIKQQLDDDYKDTMIANWKLWVPATAVNIAFCPPILRVLFLNCVFFFWSIFLSLKLNKAEDITGSE 259 The following BLAST results are available for this feature:
BLAST of NO01G04520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04520 ID=NO01G04520|Name=NO01G04520|organism=Nannochloropsis oceanica|type=gene|length=1664bpback to top protein sequence of NO01G04520.1 >NO01G04520.1-protein ID=NO01G04520.1-protein|Name=NO01G04520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=338bpback to top Synonyms
Publications
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