NO01G04490, NO01G04490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04490 vs. NCBI_GenBank
Match: EWM29375.1 (peroxisomal membrane 22 kda (mpv17 pmp22) family protein [Nannochloropsis gaditana]) HSP 1 Score: 488.0 bits (1255), Expect = 3.000e-134 Identity = 279/451 (61.86%), Postives = 314/451 (69.62%), Query Frame = 0 Query: 1 MRRQDALMAALAGLTLCLGAVRGFVMPRLPRQQCQTFGRSTGSSTSFISHHPSPTFGQTPRNVLSSRLWIKTPSVAEDNSVADKKKQSTEPSSSFAPITSLET-SLNSSDDSSASPQDLARRFAAANGIDSRQFNFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILSREAANADAEKA-----VAAAEAAGISLG---GDGGHAPGVLLSKDEPTKVGEESVTAELSDNVSMPVVANFSE------AVAAAASKQARREQMVTVPVHVEDE 437 MR + + LA LCLGAVR FV+P P + S G ST P P+ R SR W+KT A+D +A+ K+ SFAP+TSLET S + + D+ S Q+ R FAA G+DSRQ NFL+NVG+IS VAA+VLAKVVTVDLD WRGWTP EIFTRIPLDNWDGYM+VL+LHP+ VKA+TSGSVYTLGD VAQLYEGKTLGEIDRGRVARS AGF+GHGPLSH WYGVSE FF WLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIV TVKSTSFSLITSGLKLWPLAHVVTYG IPVENRLLWVDLVEILWVTILSREAANADAEKA VA EA+ +L + AP + D+ V + MP+ +N S+ + A +EQ V VH EDE Sbjct: 1 MRGRGLDVGVLAVFCLCLGAVRAFVVPVTPGLHHLSRSSSIGPSTCL----PLPSCVPPARTSCVSRRWVKTQ--AKDEEIANAKEH-----RSFAPVTSLETLSEHDAADTPRSLQERVRLFAATKGVDSRQLNFLLNVGLISAVAALVLAKVVTVDLDVWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAANADAEKAEAIGDVAVEEASSKTLAVVDSETMQAPSARAAGDDMEPV------------IFMPLASNVSDLETEDGQLRDHAEHHPEQEQQRAVSVHREDE 428
BLAST of NO01G04490 vs. NCBI_GenBank
Match: XP_002183832.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC44501.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 256.1 bits (653), Expect = 1.900e-64 Identity = 125/224 (55.80%), Postives = 150/224 (66.96%), Query Frame = 0 Query: 136 LVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFD-WLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILSREAANADAEKAV 359 ++N G I V V+L ++ T+D RGWT E+ RIP+D W GY VL P+ KA TS +VYT+GD +AQ +G +G++DRGR+ RS AG IGHGPLSH WY V + FFD L W WW+ FPK+ VDQ W PIWN YI LLG MK E L I +K T+ LI SGLKLWPLAH VTYG +PVENRLLWVD VEILWVTIL+ AA A A+ V Sbjct: 1 MINTGFIVGVVGVLLYEITTMDATISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAEAHADAKV 224
BLAST of NO01G04490 vs. NCBI_GenBank
Match: XP_002294377.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED88211.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 246.1 bits (627), Expect = 2.000e-61 Identity = 114/211 (54.03%), Postives = 148/211 (70.14%), Query Frame = 0 Query: 137 VNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFD-WLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILS 347 +N ++ + ++L +V+++D+ RGW+P EI TRIPLDNW Y +VL + PI KA+TS +VYT+GD +AQ EG+ +GE+DR RV RS AG IGHGP+SH+WY VSE FFD L WW PK+ VDQ + PIWN YI LLG M+ ++ +I +K T+ LI SGLKLWP H +TYG IPVENRLLWVD VEI+WVTIL+ Sbjct: 1 INTSILLIATLIILYQVLSIDVGITRGWSPEEIATRIPLDNWRSYTNVLNMAPIQTKAVTSATVYTIGDMIAQRTEGRGMGEVDRWRVGRSLMAGLIGHGPMSHVWYHVSEDFFDNTLSLHAWWDFIPKVIVDQTFFGPIWNNSYILLLGLMQLQSPSQIFSDMKRTTIPLIVSGLKLWPFVHCITYGLIPVENRLLWVDAVEIVWVTILA 211
BLAST of NO01G04490 vs. NCBI_GenBank
Match: CBJ48801.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 245.4 bits (625), Expect = 3.400e-61 Identity = 122/235 (51.91%), Postives = 154/235 (65.53%), Query Frame = 0 Query: 129 DSRQFNFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGW-EGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILSREAANADAEKAVAAAE 363 ++ + N N G ++ VA +A V VD + RGWT E R+PLDNWDGY ++L P+ VKA TSG VY LGD VAQ EG L I+R RV RSA AG + HGPLSH+WY V EG FD +GW + WW PKI DQL+W P WN YI LG + +++ I + ST+ L+ +G++LWPLAHVVTYG +P ENRLLWVD VEI+WVTILS +A AE+A + AE Sbjct: 47 ENNKLNLFANAGFLAGVALFTIAVVFGVDSEVSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELASIERQRVVRSAIAGLLLHGPLSHVWYNVCEGLFDIVGWNDYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIIWVTILSSQA----AEQARSPAE 277
BLAST of NO01G04490 vs. NCBI_GenBank
Match: EJK64618.1 (hypothetical protein THAOC_14631 [Thalassiosira oceanica]) HSP 1 Score: 231.1 bits (588), Expect = 6.600e-57 Identity = 116/259 (44.79%), Postives = 165/259 (63.71%), Query Frame = 0 Query: 91 PSSSFAPITSLETSLN-SSDDSSASPQDLARRFAAANGIDSRQFNFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGW--EGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILS 347 P+++ + ET+ + + +SA L ++ +D + LVN ++ +V + ++VDL RGWTP+E+ R+PLDNW GY ++LT P+ KA+TS SVYT+GD +AQ +G +G++DR R+ RS AG +GHGP+SHLWY SE FFD + WW PK+ DQLV+ P+WN +I L+G M+ + G I ++ T+ L+ SGLKLWP H+VTYG IPVENRLLWVD VEI+WVTIL+ Sbjct: 65 PAATIVGLVKPETAESPTGAATSADALRLGGQYRRTTLLDGVSADSLVNSLVLLSAVTLVAGRFLSVDLGLTRGWTPLEVAERVPLDNWRGYNEILTAAPVQTKALTSASVYTIGDIIAQTRQGSGMGDLDRPRIVRSMIAGLVGHGPMSHLWYRWSEAFFDKVVHLPHAWWDFVPKVCADQLVFGPLWNNTFILLIGFMQLNSPGMIWDEMRRTTVPLLLSGLKLWPFVHIVTYGVIPVENRLLWVDAVEIVWVTILA 323
BLAST of NO01G04490 vs. NCBI_GenBank
Match: OEU06482.1 (hypothetical protein FRACYDRAFT_200762 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 220.3 bits (560), Expect = 1.200e-53 Identity = 113/220 (51.36%), Postives = 139/220 (63.18%), Query Frame = 0 Query: 133 FNFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGW--EGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILSREAA 351 FN ++N +I +A L + +D RGW+ E RIP D W+ Y VL+ HPI KA+TS +VYT+GD +AQ EG ++ EID R RS AG IGHGPLSH+WY VS+ F + W T KI +DQ W PIWN YI LLG MK + +I +K T+ L+ SGLKLWPLAH VTYG IP ENRLLWVDLVEI+WVTIL+ AA Sbjct: 3 FNAILNTAIIVAIAFGALNHITAIDTSIMRGWSLEETAIRIPHDIWNSYSSVLSTHPIQTKAVTSATVYTIGDLIAQRTEGSSISEIDLLRTLRSLLAGLIGHGPLSHIWYNVSDELFTNVLHLPTNIWGTGVKIVIDQTTWGPIWNNTYILLLGIMKFQKPKDIGAEMKRTTIPLLKSGLKLWPLAHCVTYGLIPKENRLLWVDLVEIIWVTILASTAA 222
BLAST of NO01G04490 vs. NCBI_GenBank
Match: XP_002176482.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC42532.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 213.8 bits (543), Expect = 1.100e-51 Identity = 102/170 (60.00%), Postives = 118/170 (69.41%), Query Frame = 0 Query: 181 YMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFD-WLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILSREA 350 Y VL P+ KA TS +VYT+GD +AQ +G +G++DRGR+ RS AG IGHGPLSH WY V + FFD L W WW+ FPK+ VDQ W PIWN YI LLG MK E L I +K T+ LI SGLKLWPLAH VTYG +PVENRLLWVD VEILWVTIL+ A Sbjct: 1 YSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTAWWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTA 170
BLAST of NO01G04490 vs. NCBI_GenBank
Match: EFJ20858.1 (hypothetical protein SELMODRAFT_56885, partial [Selaginella moellendorffii]) HSP 1 Score: 212.6 bits (540), Expect = 2.400e-51 Identity = 110/234 (47.01%), Postives = 142/234 (60.68%), Query Frame = 0 Query: 131 RQFNFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTIL---SREAANA----DAEKA 358 RQ + +N +I+ AA L K+VTVD D W+GWT EI P+ NW Y + L HP++ K + SG VY++GD +AQ YEGK + + R R+ RS GF HG LSH +Y V E F ++ WW K+ DQ +WS WN Y LG ++ E IV ++ST F L+T+G KLWP AH+VTYG IPVE RLLWVD VE++WVTIL S E A A DAEK+ Sbjct: 6 RQVDRFLNASLIAAAAAYALGKIVTVDQDYWQGWTFYEIIKYAPVHNWSAYEEALRSHPVLAKMMISGIVYSIGDWMAQCYEGKPVLDFSRTRMLRSGLVGFCLHGSLSHYYYHVCEALFP---FKEWWVVPLKVGFDQTIWSAFWNSVYFITLGLLRLENPVTIVSELRSTFFPLLTAGWKLWPFAHLVTYGLIPVEQRLLWVDCVELVWVTILSMYSNEKAEARSSEDAEKS 236
BLAST of NO01G04490 vs. NCBI_GenBank
Match: EFJ32386.1 (hypothetical protein SELMODRAFT_66864, partial [Selaginella moellendorffii]) HSP 1 Score: 212.6 bits (540), Expect = 2.400e-51 Identity = 110/234 (47.01%), Postives = 142/234 (60.68%), Query Frame = 0 Query: 131 RQFNFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTIL---SREAANA----DAEKA 358 RQ + +N +I+ AA L K+VTVD D W+GWT EI P+ NW Y + L HP++ K + SG VY++GD +AQ YEGK + + R R+ RS GF HG LSH +Y V E F ++ WW K+ DQ +WS WN Y LG ++ E IV ++ST F L+T+G KLWP AH+VTYG IPVE RLLWVD VE++WVTIL S E A A DAEK+ Sbjct: 6 RQVDRFLNASLIAAAAAYALGKIVTVDQDYWQGWTFYEIIKYAPVHNWSAYEEALKSHPVLAKMMISGIVYSIGDWMAQCYEGKPVLDFSRTRMLRSGLVGFCLHGSLSHYYYHVCEALFP---FKEWWVVPLKVGFDQTIWSAFWNSVYFITLGLLRLENPVTIVSELRSTFFPLLTAGWKLWPFAHLVTYGLIPVEQRLLWVDCVELVWVTILSMYSNEKAEARSSEDAEKS 236
BLAST of NO01G04490 vs. NCBI_GenBank
Match: CEM25282.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 211.1 bits (536), Expect = 7.100e-51 Identity = 98/236 (41.53%), Postives = 148/236 (62.71%), Query Frame = 0 Query: 134 NFLVNVGMISLVAAVVLAKVVTVDLDSWRGWTPVEIFTRIPLDNWDGYMDVLTLHPIMVKAITSGSVYTLGDTVAQLYEGKTLGEIDRGRVARSAAAGFIGHGPLSHLWYGVSEGFFDWLGWEGWWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVGTVKSTSFSLITSGLKLWPLAHVVTYGFIPVENRLLWVDLVEILWVTILS-------REAANADAEKAVAAAE 363 + +VN ++++ L K++++++D+WRGWT +EI TR+ NW Y+ VL P++VKA+TSG+ YTLGD +AQ+ EG LG +DR RVAR+ AG +GHGPLSH WY +SE FF +G WW FPK+ VD +W P + Y+ + G ++ + ++ +++ L G K W + + TY IP++ RLLWVDL+E+ WVTILS ++ A AD E+A+ E Sbjct: 134 DLVVNTSLVAVFFIGALWKIISIEMDAWRGWTTLEIATRVLPANWGAYLGVLAAKPVLVKALTSGTAYTLGDGIAQITEGTGLGGLDRARVARNGFAGLVGHGPLSHYWYILSESFFASIGITAWWAVFPKLVVDLTLWGPFFCSIYLAINGFLEGKRPEHVLDGIRTNVIPLCIQGAKFWGIVGLATYSVIPIDQRLLWVDLMELFWVTILSTTYNRKEQKEAKADLEEALEREE 369 The following BLAST results are available for this feature:
BLAST of NO01G04490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04490 ID=NO01G04490|Name=NO01G04490|organism=Nannochloropsis oceanica|type=gene|length=1320bpback to top protein sequence of NO01G04490.1 >NO01G04490.1-protein ID=NO01G04490.1-protein|Name=NO01G04490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bpback to top Synonyms
Publications
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