NO01G04470, NO01G04470 (gene) Nannochloropsis oceanica

Overview
NameNO01G04470
Unique NameNO01G04470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2018
Alignment locationchr1:1183316..1185333 -

Link to JBrowse

Properties
Property NameValue
DescriptionInterferon-related developmental regulator domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1183316..1185333 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR007701Interferon-rel_develop_reg_N
Homology
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_009518859.1 (hypothetical protein PHYSODRAFT_480720 [Phytophthora sojae] >EGZ23571.1 hypothetical protein PHYSODRAFT_480720 [Phytophthora sojae])

HSP 1 Score: 128.6 bits (322), Expect = 4.600e-26
Identity = 98/367 (26.70%), Postives = 179/367 (48.77%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLAT-VAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMV-DKNSELGKWRTTTRSRNRRTRESAKHHFTEDG 432
            ++E D  + +E+L EKRT+TR   L++LT  L  Y    A +   E     ++  +R+ GE E VL +  L ++ ++ G +E+  F + +  L+ LV   ++ +++V   RAL +  F+C+ E E T   L  F+  F+ +  G     ++  A +DSW L+A+ ++     + EL  +L+ + L LLD    +++ AAGE +A L E       AS  V        E I+DR  +                    FR++++ ++ G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     +   +RR V DK S   K R+     +R+ ++  +  F +DG
Sbjct:   39 DDEQDVDDAVEELTEKRTTTRVAALEKLTTHLLQYL---APEDISESFVDNVLGCLRKPGEGEAVLGSRILAILAIIFGEDEERFFQRSKNVLKPLVKTARNAKIKVATVRALGLICFVCSVEVENTEELLELFETFFNPKIVG-----DICKAALDSWGLVASNLSDEMLASGELLERLVPKFLALLDHKDVDVRSAAGENVAFLYE-----SAASCGVPLPYG---EEILDRFLEXXXXXXXXXXXXXXXXXXXXFRDIHSTLSAGETPHVSFSVKSEVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNMLRAMLDLPETLEDRKIDRRDVFDKKSASRKQRSNELKGDRKRKQHMQDAFYDDG 389
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: OWZ23722.1 (hypothetical protein PHMEG_0001359 [Phytophthora megakarya])

HSP 1 Score: 127.9 bits (320), Expect = 7.800e-26
Identity = 104/396 (26.26%), Postives = 185/396 (46.72%), Query Frame = 0 
Query:   38 SQEAVEHPASAIVDDSVAGSNSRVASPAYENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMV-DKNSELGKWRTTTRSRNRRTRESAKHHFTEDG 432
            S  +VE   + + DD     N    S   ++E +  E +E+L EKRT+TR   L++LT  L  Y    A +   E     ++  +R+  E E VL +  L ++ L+ G +E+  F + +  L+ L    ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + E+  +L+ + L LLD    E++ AAGE +A L E  +   V             E I+DR                        R++++ +A G+ P    + ++    ++SW  +KQ E+ +DCLQ GL      N ++  +L++     +   +RR V DK S   K R+     +R+ ++  +  F +DG
Sbjct:   13 SVASVETRGTFVSDDGEFYDN---YSKTEDDEQEIDEAIEELTEKRTTTRVAALEKLTTHLLQYL---APEDISESFMDNVLGCMRKPSEAEAVLGSRILAVLALIFGEDEERYFQRSKNVLKPLAKTARNAKIKVATIRALGLICFVCSVEEENTEELLELFETFFNPKIIG-----DICKAALDSWGLIASSLSDEILASGEMLERLVPKFLALLDHKDVEVRSAAGENVAFLYESAQNCGVPL--------PYSEEILDRFXXXXXXXXXXXXXXXXXXXXXXXRDIHSTLATGETPHVSFSVKSEMLEISSWKSVKQFEAMKDCLQTGLQEHIKYNNILRGMLDLPETLEDRKVDRRDVFDKKSASRKQRSNELKGDRKRKQHLQDAFYDDG 389
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_008892404.1 (hypothetical protein PPTG_02850 [Phytophthora parasitica INRA-310] >ETI49455.1 hypothetical protein F443_06762 [Phytophthora parasitica P1569] >ETK89333.1 hypothetical protein L915_06635 [Phytophthora parasitica] >ETL42658.1 hypothetical protein L916_06574 [Phytophthora parasitica] >ETL95823.1 hypothetical protein L917_06445 [Phytophthora parasitica] >ETN23210.1 hypothetical protein PPTG_02850 [Phytophthora parasitica INRA-310] >ETP19228.1 hypothetical protein F441_06765 [Phytophthora parasitica CJ01A1] >ETP47157.1 hypothetical protein F442_06798 [Phytophthora parasitica P10297])

HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25
Identity = 94/367 (25.61%), Postives = 180/367 (49.05%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMV-DKNSELGKWRTTTRSRNRRTRESAKHHFTEDG 432
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     +   +R  V +K S   K R+     +R+ ++  +  F ++G
Sbjct:   49 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLELFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLPETLEDRKVDRSDVFNKKSASRKQRSNELKGDRKRKQHMQDAFYDNG 399
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ETM49100.1 (hypothetical protein L914_06546 [Phytophthora parasitica] >ETO78190.1 hypothetical protein F444_06829 [Phytophthora parasitica P1976])

HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25
Identity = 94/367 (25.61%), Postives = 180/367 (49.05%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMV-DKNSELGKWRTTTRSRNRRTRESAKHHFTEDG 432
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     +   +R  V +K S   K R+     +R+ ++  +  F ++G
Sbjct:   49 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLGLFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLPETLEDRKVDRSDVFNKKSASRKQRSNELKGDRKRKQHMQDAFYDNG 399
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_002294823.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87603.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25
Identity = 115/399 (28.82%), Postives = 179/399 (44.86%), Query Frame = 0 
Query:   80 AEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIR------RGGE-------KEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLV-TRGQHEEVRVEAARALAMGSFICNT----EEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLAT-------VAPNGYHTHEL--RVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDV--------------SAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEI---DPASFETPSERRMVDKNSELGKWRTTTRSRNRRTRESAKHHF-TEDGED 434
            +EKR++ RE   + L   +  YA   A    +EI+ S    L+       RGG         E       L    +++G + D++   +  PL+ +    G+  +VR  A R LAM  FIC T    E     A +   + +      GE+ S  L+A  +D WALL+T        A +   T  L   + LL  L   L+++   L+ +AGE +A++ E    + +   +                +E E L++ I  R+ +++ E    MS+K KK QRA+FR+    + + + PEEV+NFR    R+TSW ++ QL   R CLQ G      TN  +HDV        A      +R  + K S   K      ++ RRTR + K+HF T DG+D
Sbjct:  106 SEKRSTKREALYRVLFKAITQYA---AGPTGQEILLSRWEDLLEACLASLRGGSGGNAATPAEQYASCRVLEASAVVLGEDRDDVVEALNEPLKRVTNATGRATQVRSAALRCLAMVHFICGTDCLEEGNDCFAVMDLCEKVGGEMYRGEKVSPLLRATALDCWALLSTTLHDAHIAAGDAEDTVALGRGLLLLPLLANCLESNDVGLRSSAGELVAMIHESRLNLGMDEGEAENATERRFRRGSWDGSEWEILMDEIKQRVAELSVESGHHMSKKSKKEQRATFRDFMNTIVDDESPEEVVNFRGGKLRITSWKEIIQLNFVRHCLQSGFQIQLMTNETLHDVFGAVFSSAAGLSQLEKRMYMSKTSAKSKAVDRAMTKQRRTRTNVKNHFITADGDD 501
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: KUF77372.1 (Interferon-related developmental regulator 1 [Phytophthora nicotianae] >KUG00213.1 Interferon-related developmental regulator 1 [Phytophthora nicotianae])

HSP 1 Score: 127.5 bits (319), Expect = 1.000e-25
Identity = 94/367 (25.61%), Postives = 180/367 (49.05%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMV-DKNSELGKWRTTTRSRNRRTRESAKHHFTEDG 432
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     +   +R  V +K S   K R+     +R+ ++  +  F ++G
Sbjct:   74 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLELFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLPETLEDRKVDRSDVFNKKSASRKQRSNELKGDRKRKQHMQDAFYDNG 424
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ETI49456.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETP47158.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-25
Identity = 88/333 (26.43%), Postives = 166/333 (49.85%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRM 399
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     ET  +R++
Sbjct:   49 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLELFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLP----ETLEDRKV 361
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_008892407.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETK89334.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL42659.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL95824.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN23211.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETP19229.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-25
Identity = 88/333 (26.43%), Postives = 166/333 (49.85%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRM 399
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     ET  +R++
Sbjct:   49 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLELFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLP----ETLEDRKV 361
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ETM49101.1 (hypothetical protein, variant 1 [Phytophthora parasitica])

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-25
Identity = 88/333 (26.43%), Postives = 166/333 (49.85%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRM 399
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     ET  +R++
Sbjct:   49 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLGLFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLP----ETLEDRKV 361
[Close]
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ETO78191.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1976])

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-25
Identity = 88/333 (26.43%), Postives = 166/333 (49.85%), Query Frame = 0 
Query:   67 ENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLA-TVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRM 399
            ++E +  E +E+L EKRT+TR   L++LTA L+ Y    A +   E     ++  +R+  E E VL +  L +M ++ G +E+  F + +  L+ L+   ++ +++V   RAL +  F+C+ EEE T   L  F+  F+ +  G     ++  A +DSW L+A +++     + EL  +L+ + L LLD    +++ AAGE +A L E  +   V             E I+ R  +M++                  R++++ +A G+ P    + ++    ++SW  +KQ E+ ++CLQ GL      N ++  +L++     ET  +R++
Sbjct:   49 DDEQEIDEAIEELTEKRTTTRVAALEKLTAYLQQYL---APEDVSESFVDNVLGCLRKPSEGEAVLGSRILAIMAIIFGEDEERYFQRSKNVLKPLIKTARNAKIKVSTIRALGLICFVCSVEEENTEELLGLFETFFNPKIIG-----DICKAALDSWGLVASSLSDEILASDELLERLVPKFLALLDHKDVDVRSAAGENVAFLYESAQNCGVPL--------PYSEEILARFLEMSKXXXXXXXXXXXXXXXXXXRDIHSTLASGETPHVSFSVKSDVLEISSWKSVKQFEAMKECLQTGLQEHIKYNNILRAILDLP----ETLEDRKV 361
The following BLAST results are available for this feature:
BLAST of NO01G04470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009518859.14.600e-2626.70hypothetical protein PHYSODRAFT_480720 [Phytophtho... [more]
OWZ23722.17.800e-2626.26hypothetical protein PHMEG_0001359 [Phytophthora m... [more]
XP_008892404.11.000e-2525.61hypothetical protein PPTG_02850 [Phytophthora para... [more]
ETM49100.11.000e-2525.61hypothetical protein L914_06546 [Phytophthora para... [more]
XP_002294823.11.000e-2528.82predicted protein [Thalassiosira pseudonana CCMP13... [more]
KUF77372.11.000e-2525.61Interferon-related developmental regulator 1 [Phyt... [more]
ETI49456.11.700e-2526.43hypothetical protein, variant 1 [Phytophthora para... [more]
XP_008892407.11.700e-2526.43hypothetical protein, variant 1 [Phytophthora para... [more]
ETM49101.11.700e-2526.43hypothetical protein, variant 1 [Phytophthora para... [more]
ETO78191.11.700e-2526.43hypothetical protein, variant 1 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007832NSK007832Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04470.1NO01G04470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100028g13gene1253Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04470.1NO01G04470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04470 ID=NO01G04470|Name=NO01G04470|organism=Nannochloropsis oceanica|type=gene|length=2018bp
CGTTCTCGGGCAACTTCAACCCCAAAATCAACATTATCCCATGCGAAGCT
ACCCAGCAGCAAAAGCACGTGGTGATAGTGCCCTGTTTACTGTTCATGGT
CTATAAAGACATCAAACACCCACATGAACACCTTGAAAATCATGCCCCGT
TCCTTCCGACAACACAGACCGTAATAATCTGCGGAAGTCTTCCCCTTCCC
TGTGACCTCCTCTCCCAAACCTCAAGCCGCCAACCAAGACGCCAAAGGCA
TGGGCAAGAAAAgtaagtaccgtcgttacgtggcacaatgcctgtatgtc
ttgagctggcataccatctctcttccctttagGTGCGCGTGCCCTGGCCG
CGGCAGGCAAAAAAGGAAAGGGCGCAGGATTGACAAGTGACGATGAACGC
GAAAGCGTTACCTCTGAGGCCTCATTCCTCTCCCAAGAGGCTGTGGAGCA
TCCCGCTTCTGCGATCGTGGACGATTCGGTCGCAGGTTCAAACAGTAGAG
TCGCTTCTCCTGCTTATGAGAACGAGGCGGATTTTGCTGAGGTGCTTGAA
AAGCTGGCGGAGAAACGAACGTCGACCCGCGAGACTGGCTTGAAGGAGTT
GACTGCAGGGCTTCGCTCGTACGCATTTGCCGATGCGGCGCAGGCAAACC
GCGAAATAATCTTCTCGACTTTGATTAGTCTGATCCGCCGGGGTGGGGAG
AAGGAGGGTGTGTTGTGTGCTGAGGCCTTGGGGTTGATGTTTTTGTTGAT
TGGACCGGAGGAAGACGAGATTTTCATGCAGATCCGCGGACCCTTGGAAT
ATCTAGTGACGCGCGGGCAGCATGAAGAGGTGAGGGTGGAGGCTGCACGA
GCTTTGGCGATGGGGTCATTTATTTGTAATACGGAGGAGGAGGTGACGTT
GGCGAACCTGTCGTTTTTCCAAGGCTTATTTTCGGGTGAAAGCGAGGGAG
AAAGGGCCTCCGAAGAGCTCAAGGCTGCGGGCGTCGATTCTTGGGCACTT
TTAGCGACTGTTGCACCTAATGGCTACCACACGCATGAATTAAGGGTTCA
GTTGCTAGAGGAGCTGCTGGGACTGCTGGATGCTTCGTCGGCTGAGTTGA
AGGTGGCGGCGGGGGAGGGGTTGGCTTTGCTGCGTGAGTACTGGCGCCAG
GTCCCTGTGGCCTCTCATGATGTATCGGCGGAGGAGGAGGATTTGCTGGA
AAGTATTGTGGATAGATTGCGGGACATGGCTAGAGAGGGGAGTAAACGGA
TGAGTCGAAAAGATAAGAAAGCGCAGAGGGCGTCGTTTCGTGAGGTATAC
GCGGCAGTGGCGGAGGGACAGCCTCCAGAGGAGGTGATTAATTTTAGGAC
GCGGAGCTTTCGGTTGACAAGTTGGGTGAAGATGAAGCAGTTAGAATCGT
TTCGAGACTGTCTACAGGGGGGCTTGTTGGCGGCTTTTGGGACGAACCCG
GTAATTCACGATGTGCTGGAAATCGACCCTGCGAGCTTCGAGACGCCGTC
GGAGAGGAGAATGGTTGATAAAAACAGCGAATTGGGAAAGTGGAGGACGA
CGACCCGCTCCAGGAATCGTCGGACAAGAGAGAGTGCTAAGCATCATTTT
ACGGAGGATGGGGAGGATAGTTAGAGGATTTGGGCGGTGGGGAGGTAGGT
AAGTTTTAGAGAGGTGGAAGAGGGAAATGAGGGTAGTGACGGGAGAATGA
AGGGGAGGAGAGATGTTTCAGGGAGCGCTGGGTTGAGAAGTCCAAGCGGT
GATGAGTCAAAAATCATATAGATTGGTAGGTGTAGAGTTGTGCATGTGCT
CGGACATTTGCGTGCTGATGTACGTGCCTGCGGTATGCACAAGAAAAAAG
GGGACGAGCGGGGGGGAAGGTTCTAGAGACCAGTATGAGGAAGAGACGAG
ATACAGTTGACTCACTACAGTAGTTCTCTTCCTAGCTTTCACAGAAAGAC
CTGAAAAGGTTACGACAAAGACGTAGTGCGTAACAACAAATAAAGAAAAG
AACACTGGGAAACTCTGA
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protein sequence of NO01G04470.1

>NO01G04470.1-protein ID=NO01G04470.1-protein|Name=NO01G04470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MGKKSARALAAAGKKGKGAGLTSDDERESVTSEASFLSQEAVEHPASAIV
DDSVAGSNSRVASPAYENEADFAEVLEKLAEKRTSTRETGLKELTAGLRS
YAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDE
IFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFF
QGLFSGESEGERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELL
GLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRL
RDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLT
SWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVD
KNSELGKWRTTTRSRNRRTRESAKHHFTEDGEDS*
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Synonyms
Publications