NO01G04470, NO01G04470 (gene) Nannochloropsis oceanica

Overview
NameNO01G04470
Unique NameNO01G04470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2018
Alignment locationchr1:1183316..1185333 -

Link to JBrowse

Properties
Property NameValue
DescriptionInterferon-related developmental regulator domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1183316..1185333 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR007701Interferon-rel_develop_reg_N
Homology
BLAST of NO01G04470 vs. NCBI_GenBank
Match: EWM29387.1 (Interferon-related developmental regulator domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 528.5 bits (1360), Expect = 2.000e-146
Identity = 273/400 (68.25%), Postives = 327/400 (81.75%), Query Frame = 0
Query:   35 SFLSQEAVEHPASAIVDDSVAGSNSRVASPAYENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVDKNSELGKWRTTTRSRNRRTRESAKHHFTEDGEDS 435
            SFLSQE  E    A V+++ A      AS    N  DFA++LEKL EKRT+ RE  L+EL AGLRSY F D A ANRE +FS+L+ L+RR  E EGVLCAEALG+M LLIGPEEDEIF  +R PLE+++TRGQ E +R+EA RALA+GSFICNTEEE TLA+L+FF+ LF+GESEG RASEELKAAGVD+W+LL TVAP GY+THE R  LLE  L LLDASSA+L+VAAGE +ALLRE+WRQ  +A HDVSA+EE++++SIVDRL+DMAREGSKRMSRKDKKAQRASFRE+ +AV +GQ PEEVI++RTRSFRLTSWVKMKQ+E+ RDCLQGG L A   N VIHD+ ++DP +F+ P ER +V KNSELG+WRTTTRSRNRR+RE AKHHFTE+GED+
Sbjct:    2 SFLSQETFEASTPAGVEETTAPGAGAAASS--RNNGDFADLLEKLNEKRTTAREDCLRELIAGLRSYTFVDQAIANRESVFSSLVGLLRRSRETEGVLCAEALGMMMLLIGPEEDEIFNLVRAPLEFVITRGQSERMRIEATRALALGSFICNTEEERTLAHLAFFEALFTGESEGGRASEELKAAGVDAWSLLFTVAPRGYNTHESRALLLENFLHLLDASSADLRVAAGEAIALLREHWRQEGLAVHDVSADEEEVVDSIVDRLQDMAREGSKRMSRKDKKAQRASFREICSAVVDGQRPEEVISYRTRSFRLTSWVKMKQVEALRDCLQGGFLTALAQNTVIHDIFDLDPTAFDVPVERSVVAKNSELGRWRTTTRSRNRRSREKAKHHFTEEGEDA 399          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_005855477.1 (nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 [Nannochloropsis gaditana CCMP526] >EKU20879.1 nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 504.6 bits (1298), Expect = 3.100e-139
Identity = 276/435 (63.45%), Postives = 329/435 (75.63%), Query Frame = 0
Query:    1 MGKKSARALAAAGKK-GKGAGLTSDDERESVTSEASFLSQEAVEHPASAIVDDSVAGSNSRVASPAYENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVDKNSELGKWRTTTRSRNRRTRESAKHHFTEDGEDS 435
            MGKKSARALAAA ++ G+G GLTSDDERESV S+ SFLSQE  E    A V+++ A      AS    N  DFA++LEKL EKRT+ RE  L+EL AGLRSY F D A ANR                                  PEEDEIF  +R PLE+++TRGQ E +R+EA RALA+GSFICNTEEE TLA+L+FF+ LF+GESEG RASEELKAAGVD+W+LL TVAP GY+THE R  LLE  L LLDASSA+L+VAAGE +ALLRE+WRQ  +A HDVSA+EE++++SIVDRL+DMAREGSKRMSRKDKKAQRASFRE+ +AV +GQ PEEVI++RTRSFRLTSWVKMKQ+E+ RDCLQGG L A   N VIHD+ ++DP +F+ P ER +V KNSELG+WRTTTRSRNRR+RE AKHHFTE+GED+
Sbjct:  616 MGKKSARALAAAQRRAGRGGGLTSDDERESVASDMSFLSQETFEASTPAGVEETTAPGAGAAASS--RNNGDFADLLEKLNEKRTTAREDCLRELIAGLRSYTFVDQAIANR----------------------------------PEEDEIFNLVRAPLEFVITRGQSERMRIEATRALALGSFICNTEEERTLAHLAFFEALFTGESEGGRASEELKAAGVDAWSLLFTVAPRGYNTHESRALLLENFLPLLDASSADLRVAAGEAIALLREHWRQEGLAVHDVSADEEEVVDSIVDRLQDMAREGSKRMSRKDKKAQRASFREICSAVVDGQRPEEVISYRTRSFRLTSWVKMKQVEALRDCLQGGFLTALAQNTVIHDIFDLDPTAFDVPVERSVVAKNSELGRWRTTTRSRNRRSREKAKHHFTEEGEDA 1014          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: CBN77743.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 194.9 bits (494), Expect = 5.200e-46
Identity = 128/416 (30.77%), Postives = 203/416 (48.80%), Query Frame = 0
Query:   55 AGSNSRVASPAYENEADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIR-RGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLRE----------------------------------------YWRQVPVASHDVSAEEEDLL---ESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVDKNSELGKWRTTTRSRNRRTRESAKHH 427
            AG    V S A +   DF + +E+L EKR STRE GL+ +   +      +   A RE + S LI + R +G E +G     AL ++ + IGPEE+E F  +R PL  L+TR +HE VRV A R LA+  FIC+++++ T   L     +FS  S+G   ++++ AA +  W LLAT     +    +  Q L     LL +   ++++ AGE LALL E                                                      E  DL    E +V+ ++    + SK++SR+ KK QR +FR+++A + E +PPEEV++ +  S  +  W  +KQL + R CLQ G      +N ++ ++L +      T  E+    KNSE+ K +TT+R+R+R +++ A+ H
Sbjct:   56 AGGEEGVNSKAVD---DFKDGVEQLTEKRASTREAGLRAVIKFMLHSPDLEPVLAMRETVLSALIGVARGKGTESQGAHALRALSVLCVCIGPEEEEAFRSLRRPLRSLITRSRHEGVRVGAVRTLALACFICSSDDDNTSETLDLLADVFSRTSDGLEVTDKVCAAALSGWGLLATTVSRSWVATRMTKQHLRVFRELLSSPDMDVRIEAGENLALLHESRIILGLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEAMDLTVLWEEVVEEMKGFITDSSKKLSRETKKQQRRTFRQLFATIGENEPPEEVVSLQNGSLTVADWAHIKQLNALRSCLQSGFQTQMQSNELLREILGVSKWG-GTGGEKPFYSKNSEVRKQQTTSRTRSRHSKQEAQDH 467          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ORX90108.1 (IFRD-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 140.6 bits (353), Expect = 1.200e-29
Identity = 97/352 (27.56%), Postives = 177/352 (50.28%), Query Frame = 0
Query:   76 LEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGE-KEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEI------DPASFETPSERRMVDKNSELGKWRTTTRSRNRRTR 421
            +E+L+EKRTSTRE  L  L   L      +     R  I   L   +++ G  +E +L  + + L F+ +G +E+  + +    L+ +V+     ++       LAM  F+ +++E+ TL  +  F  +F    +  R   +   + V++  LL T       T ++    +  L  LL++SS EL+VA+GE +A++ E      ++S   S    D +++++  L  +A + SKR S+KD+  QR++FR++  ++ E + PE  + F         W ++KQL +FR+ L  GL   F  N ++HD+ ++      D   +  PS   +V +NSE+ K R+  ++R R+ R
Sbjct:   76 IEELSEKRTSTREAALLRLAKLLSHKYLEEDLLLQRSTILDALRKCVKKSGSIQEKILSVKVVALCFITLGADEESAYKEFAPILKTIVSNVTDGDILSAVINCLAMICFVSSSDEQETLLLMDMFTTVF----KDSRQMPQAVVSAVNAHGLLFTTLDGPRITRDIFDSTMPILTRLLESSSMELRVASGENIAMMIEV-----LSSDPDSPFRYDRMDNLLISLNMLATDSSKRRSKKDRSTQRSAFRDIVNSIEEDEAPEVKLKFHGEVITFNGWSEIKQLNAFREALAEGLHVHFQYNELLHDIFQVSFSPDMDSEDYRPPS--YVVSQNSEISKQRSQDKNRQRQQR 416          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ORX77075.1 (IFRD-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 140.2 bits (352), Expect = 1.500e-29
Identity = 109/367 (29.70%), Postives = 183/367 (49.86%), Query Frame = 0
Query:   71 DFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGE-KEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESE-GERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAE-EEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSE----RRMVDKNSELGKWRTTTRSRNRRTRESAKHHFTED 431
            +F  ++E+L+EKRT+TRE+ L +L   L      +  Q   E I  TL   +++ G  +E +L ++A+ L F+ +G  E+ ++  +   L+ +V      EV   A  ALAM  FI +++E  TL  +  F  +F    +  + A   + A G+    L  TV+P       +   ++  L  LL++ +  L+VA+GE +AL+ E  R       D S     D ++++   L  +  +  K  S+KD+  QR++FR++ +++ E  PPE  + FR      T W ++KQL +FR+ L  GL   F  N ++HD+ ++  A     S       +V  NSEL K RT   ++ R+ R S    F ED
Sbjct:   67 EFKRIIEELSEKRTTTRESTLLKLIKALSHKFLDEDLQLQSESIIDTLKKCLKKSGSAREKILASKAITLCFITLGAGEESLYKDVSPILKNIVHNSAEPEVLSAAISALAMICFIASSDEFETLKLMDMFAIVFKDSHKLTQAAISAINAHGL----LFTTVSPR--LGRSMFDSVMPVLTRLLESPNTALRVASGENIALMIETLRD------DTSTNFRYDGIQNLTRSLTALVTDSRKHRSKKDRSTQRSAFRDIVSSIEERNPPELKLKFRGEVITFTGWSEIKQLTAFREALAEGLHVHFQYNELLHDIFDVSLAPDAEGSSGYLPSLVVSPNSELSKLRTQGMAKQRQQR-SRYESFNED 420          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_005106666.1 (PREDICTED: interferon-related developmental regulator 1-like [Aplysia californica])

HSP 1 Score: 133.3 bits (334), Expect = 1.900e-27
Identity = 124/441 (28.12%), Postives = 202/441 (45.80%), Query Frame = 0
Query:    4 KSARALAAAGKKGKGAGL-----TSDDERESVT---SEASFLSQEAVEHPASAIVDDSVAGSNSRVASPAYENEAD-FAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVT-RGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFS-GESEGERASEE------LKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINF-RTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVDK------NSELGKWRTTTRSRNRRTR 421
            KS  +    G KG+ A       T +++ ESV    S  S LS +   H +    D           +   EN  D F E L+   +K   +R   L+ +   L+    A+     +E +   L+  +R+G  +E ++    LGLM + +GPE + +FM ++  L  L+T    H +VR   A  LAM   +C+ + E T   +  F+ +F  G  +GE +         L +  + +W LL TVAP  Y         L  L  LL +S  +L++AAGE +ALL E  R    +  D   EEE    S+ + L+ +A +  K  ++KD++ QR+ FR+V   V E + P EV+   +     + SW + +Q +SF   LQ G L     NP++ ++ ++     +  S  + + K      N+   K RT TR++ R  R
Sbjct:    3 KSKNSKRRGGGKGQEAAAVPAPRTRNEDDESVADNWSTQSVLSDDTSWHGS----DQGHNTEEDAEDTTEQENFEDRFMECLDSTLQKSAQSRLKALQGIQKALQKKYVAEFLLERKETVSDNLVKCLRKGKGEEQIVATSCLGLMAIQLGPEAESMFMSVQPVLSVLLTDNSSHYKVRGMCATTLAMMCLLCSDDLEKTKTAIKSFEDIFKLGYGKGENSPSVPPEMSWLMSQALSAWCLLLTVAPQ-YEVQTHINNHLGYLQDLLQSSDVDLRMAAGEAVALLYELARD---SDEDFEHEEE---TSLCELLKQLATDSVKHRAKKDRRQQRSCFRDVQRYVVECENPSEVVKLGKENLLEICSWSQKRQYDSFCQILQTGTLVHMKANPILREMFDLGAPGQDEYSHTKSLSKAQRTFINAASFKARTKTRAKQRDKR 432          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_022301286.1 (interferon-related developmental regulator 1-like [Crassostrea virginica])

HSP 1 Score: 132.1 bits (331), Expect = 4.100e-27
Identity = 120/421 (28.50%), Postives = 206/421 (48.93%), Query Frame = 0
Query:   14 KKGKG----AGL----TSDDERESVT--SEASFLSQEAVEHPASAIVDDSVAGSNSRVASPAYEN-EADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICN----TEEEVTLANLSFFQGLF-SGESEGERA-------SEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVDKNSELGKWRTT 412
            KKGKG    AG+     SDD+RE+    S AS LS E            S+   +    S A EN E    + ++ L EK   +R++ L  +   L      D     +  +   L+  +++G  +E VL A+ L L+ + +G E +++F +I+    +L+T      V ++A    A+G  +CN    ++ +V +  L   +G+F S   +G+++       +  L A+ +  W+LL ++AP+ +   +L  + LE L  LL ++  EL++ AGE LALL E  R+      D   E +D ++++ + L+ +A + +K  ++KD++ QR+SFR+V  AV EG  P+  I F T S  + SW + KQ ++F   L  G+      N V+ +V  +       P   + V K   + KW  T
Sbjct:    6 KKGKGFKPKAGIDSLPASDDDRETADNWSTASVLSDEG---------GSSIPSEDGPDESSAQENFEDKLKDCIDGLTEKSAQSRKSALDGVMKALSKKYLLDFLMDRKMTLSDYLLRCLKKGKGEEQVLAAKCLSLLCVQLGLEAEDLFSEIQ---PHLLTAMNDNSVALKARSQCAIGLAVCNFVSCSDIDVVMKVLEALEGIFKSSYRKGDKSIPSHTPETTHLHASALSGWSLLLSIAPS-FLVMKLVEKHLEHLPDLLHSADVELRIEAGETLALLYELARE-----EDEDFEGKD-IDNLCETLKKLATDSNKHRAKKDRRQQRSSFRDVLRAVEEGDVPDIAIKFGTESIVIDSWTRKKQYDAFCAVLGSGVYQHLQDNMVVREVFGL---GMPIPVGAKPVQK---ITKWERT 401          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_022301105.1 (interferon-related developmental regulator 1-like [Crassostrea virginica])

HSP 1 Score: 131.7 bits (330), Expect = 5.400e-27
Identity = 120/421 (28.50%), Postives = 206/421 (48.93%), Query Frame = 0
Query:   14 KKGKG----AGL----TSDDERESVT--SEASFLSQEAVEHPASAIVDDSVAGSNSRVASPAYEN-EADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICN----TEEEVTLANLSFFQGLF-SGESEGERA-------SEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVDKNSELGKWRTT 412
            KKGKG    AG+     SDD+RE+    S AS LS E            S+   +    S A EN E    + ++ L EK   +R++ L  +   L      D     +  +   L+  +++G  +E VL A+ L L+ + +G E +++F +I+    +L+T      V ++A    A+G  +CN    ++ +V +  L   +G+F S   +G+++       +  L A+ +  W+LL ++AP+ +   +L  + LE L  LL ++  EL++ AGE LALL E  R+      D   E +D ++++ + L+ +A + +K  ++KD++ QR+SFR+V  AV EG  P+  I F T S  + SW + KQ ++F   L  G+      N V+ +V  +       P   + V K   + KW  T
Sbjct:    6 KKGKGFKPKAGIDSLPASDDDRETADNWSTASVLSDEG---------GSSIPSEDGPDESSAQENFEDKLKDCIDGLTEKSAQSRKSALDGVMKALSKKYLLDFLMDRKMTLSDYLLRCLKKGKGEEQVLAAKCLSLLCVQLGLEAEDLFSEIQ---PHLLTAMTDNSVALKARSQCAIGLAVCNFVSCSDIDVVMKVLEALEGIFKSSYRKGDKSIPSHTPETTHLHASALSGWSLLLSIAPS-FLVMKLVEKHLEHLPDLLHSADVELRIEAGETLALLYELARE-----EDEDFEGKD-IDNLCETLKKLATDSNKHRAKKDRRQQRSSFRDVLRAVEEGDVPDIAIKFGTESIVIDSWTRKKQYDAFCAVLGSGVYQHLQDNMVVREVFGL---GMPIPVGAKPVQK---ITKWERT 401          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: ORX93441.1 (IFRD-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 131.3 bits (329), Expect = 7.100e-27
Identity = 95/351 (27.07%), Postives = 175/351 (49.86%), Query Frame = 0
Query:   76 LEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGE-KEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFFQGLFSGESEGERASEELKAAGVDSWALLATVAPNGYH-THELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLE------IDPASFETPSERRMVDKNSELGKWRTTTRSRNRR 419
            +E L+EKRT+TRET L  L   L      +     R      L   I++    +E +L A  + L F+ +G +E++++      L+ +++      V   A   L+M  F+ +++EE TL  +     +F    +  +A     A+ +++  LL T        T ++    +  +  LL++SS EL+V++GE +AL+ E      ++S   +    D +++++  L  +A +GSKR S+KD+  QR++FR++ + + + + PE  + F       + W ++KQL +FR+ L  GL   F  N ++HD+ E      I+      PS   +V +NSEL K R+   ++ R+
Sbjct:   76 IEDLSEKRTTTRETALLRLAKLLSHRYLNEDLTLQRNTTMDALKKCIKKSASVQEKILSARVIALCFITLGADEEDLYRDFAPILKTIISNVTDGNVLSAAINCLSMICFVASSDEEETLKLMDMLTTIFKDSHQTPQAI----ASAINAHGLLYTTLDGSLRVTRDIFDSTMPIMTRLLESSSMELRVSSGENIALMIEV-----LSSESDAPFRYDRMDNLLISLNMLATDGSKRRSKKDRSTQRSAFRDIVSFIEDDEAPEVKLKFHGEVITFSGWSEIKQLNAFREALAEGLHVHFQHNELLHDIFEVSFTPDIEGEGHHPPS--YVVSQNSELSKSRSQEMNKQRQ 415          
BLAST of NO01G04470 vs. NCBI_GenBank
Match: XP_019918557.1 (PREDICTED: interferon-related developmental regulator 2-like [Crassostrea gigas])

HSP 1 Score: 130.2 bits (326), Expect = 1.600e-26
Identity = 127/438 (29.00%), Postives = 213/438 (48.63%), Query Frame = 0
Query:   14 KKGKG----AGLT----SDDERESVT--SEASFLSQEAVEHPASAIVDDSVAGSNSRVASPAYEN-EADFAEVLEKLAEKRTSTRETGLKELTAGLRSYAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDEIFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICN----TEEEVTLANLSFFQGLF-SGESEGERA-------SEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELLGLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRLRDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLTSWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEI--------DPASFETPSERRMVDKNSELGKWRTTTRSRNRRTR 421
            + GKG    AGL     SDD+RE+    S AS LS E V          S+   +    S A EN E    + ++ L EK   +R+  L+ +   L      D     +  +   L+  +++G  +E VL A+ L L+ + +G E +++F +I+    +L+T      V ++A    A+G  +CN    ++ +V +  L   +G+F S   +G+++       +  L A+ +  W+LL ++AP+ +   +L  + LE L  LL ++  EL++ AGE +ALL E  R+      D   E +D ++S+ + L+ +A + +K  ++KD++ QR+SFR+V  AV EG  PE  I F T S  + SW + KQ ++F   L  G+      N V+ +V  +         PA   T  ER     N+   K  T  RS++R  R
Sbjct:   32 RTGKGFKPKAGLDSLPGSDDDRETADNWSTASVLSDEGV---------SSIPSEDGPDESSAQENFEDKLKDYIDGLTEKSAQSRKNALEGVMKALSKKYLLDFLMDRKMTLSDYLLRCLKKGKGEEQVLAAKCLSLLCVQMGLEAEDLFTEIQ---PHLLTAMNDNSVALKARSQCAIGLAVCNFVSCSDIDVVMKVLEALEGIFKSSYRKGDKSIPSHPPETTHLHASALGGWSLLLSIAPS-FLVTKLLEKHLEHLPDLLHSADVELRIEAGETIALLYELARE-----EDEDYEGKD-IDSLCETLKKLATDSNKHRAKKDRRQQRSSFRDVLRAVEEGDVPELTIKFGTESVIIDSWTRKKQYDAFCAVLGSGVYQHLQDNFVVREVFGLGAPIPVGAKPAQKITKWER--THYNAAAFKALTKARSKHRDKR 448          
The following BLAST results are available for this feature:
BLAST of NO01G04470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29387.12.000e-14668.25Interferon-related developmental regulator domain-... [more]
XP_005855477.13.100e-13963.45nadh:ubiquinone oxidoreductase complex i intermedi... [more]
CBN77743.15.200e-4630.77conserved unknown protein [Ectocarpus siliculosus][more]
ORX90108.11.200e-2927.56IFRD-domain-containing protein [Basidiobolus meris... [more]
ORX77075.11.500e-2929.70IFRD-domain-containing protein [Basidiobolus meris... [more]
XP_005106666.11.900e-2728.12PREDICTED: interferon-related developmental regula... [more]
XP_022301286.14.100e-2728.50interferon-related developmental regulator 1-like ... [more]
XP_022301105.15.400e-2728.50interferon-related developmental regulator 1-like ... [more]
ORX93441.17.100e-2727.07IFRD-domain-containing protein [Basidiobolus meris... [more]
XP_019918557.11.600e-2629.00PREDICTED: interferon-related developmental regula... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007832NSK007832Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04470.1NO01G04470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100028g13gene1253Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04470.1NO01G04470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04470 ID=NO01G04470|Name=NO01G04470|organism=Nannochloropsis oceanica|type=gene|length=2018bp
CGTTCTCGGGCAACTTCAACCCCAAAATCAACATTATCCCATGCGAAGCT
ACCCAGCAGCAAAAGCACGTGGTGATAGTGCCCTGTTTACTGTTCATGGT
CTATAAAGACATCAAACACCCACATGAACACCTTGAAAATCATGCCCCGT
TCCTTCCGACAACACAGACCGTAATAATCTGCGGAAGTCTTCCCCTTCCC
TGTGACCTCCTCTCCCAAACCTCAAGCCGCCAACCAAGACGCCAAAGGCA
TGGGCAAGAAAAgtaagtaccgtcgttacgtggcacaatgcctgtatgtc
ttgagctggcataccatctctcttccctttagGTGCGCGTGCCCTGGCCG
CGGCAGGCAAAAAAGGAAAGGGCGCAGGATTGACAAGTGACGATGAACGC
GAAAGCGTTACCTCTGAGGCCTCATTCCTCTCCCAAGAGGCTGTGGAGCA
TCCCGCTTCTGCGATCGTGGACGATTCGGTCGCAGGTTCAAACAGTAGAG
TCGCTTCTCCTGCTTATGAGAACGAGGCGGATTTTGCTGAGGTGCTTGAA
AAGCTGGCGGAGAAACGAACGTCGACCCGCGAGACTGGCTTGAAGGAGTT
GACTGCAGGGCTTCGCTCGTACGCATTTGCCGATGCGGCGCAGGCAAACC
GCGAAATAATCTTCTCGACTTTGATTAGTCTGATCCGCCGGGGTGGGGAG
AAGGAGGGTGTGTTGTGTGCTGAGGCCTTGGGGTTGATGTTTTTGTTGAT
TGGACCGGAGGAAGACGAGATTTTCATGCAGATCCGCGGACCCTTGGAAT
ATCTAGTGACGCGCGGGCAGCATGAAGAGGTGAGGGTGGAGGCTGCACGA
GCTTTGGCGATGGGGTCATTTATTTGTAATACGGAGGAGGAGGTGACGTT
GGCGAACCTGTCGTTTTTCCAAGGCTTATTTTCGGGTGAAAGCGAGGGAG
AAAGGGCCTCCGAAGAGCTCAAGGCTGCGGGCGTCGATTCTTGGGCACTT
TTAGCGACTGTTGCACCTAATGGCTACCACACGCATGAATTAAGGGTTCA
GTTGCTAGAGGAGCTGCTGGGACTGCTGGATGCTTCGTCGGCTGAGTTGA
AGGTGGCGGCGGGGGAGGGGTTGGCTTTGCTGCGTGAGTACTGGCGCCAG
GTCCCTGTGGCCTCTCATGATGTATCGGCGGAGGAGGAGGATTTGCTGGA
AAGTATTGTGGATAGATTGCGGGACATGGCTAGAGAGGGGAGTAAACGGA
TGAGTCGAAAAGATAAGAAAGCGCAGAGGGCGTCGTTTCGTGAGGTATAC
GCGGCAGTGGCGGAGGGACAGCCTCCAGAGGAGGTGATTAATTTTAGGAC
GCGGAGCTTTCGGTTGACAAGTTGGGTGAAGATGAAGCAGTTAGAATCGT
TTCGAGACTGTCTACAGGGGGGCTTGTTGGCGGCTTTTGGGACGAACCCG
GTAATTCACGATGTGCTGGAAATCGACCCTGCGAGCTTCGAGACGCCGTC
GGAGAGGAGAATGGTTGATAAAAACAGCGAATTGGGAAAGTGGAGGACGA
CGACCCGCTCCAGGAATCGTCGGACAAGAGAGAGTGCTAAGCATCATTTT
ACGGAGGATGGGGAGGATAGTTAGAGGATTTGGGCGGTGGGGAGGTAGGT
AAGTTTTAGAGAGGTGGAAGAGGGAAATGAGGGTAGTGACGGGAGAATGA
AGGGGAGGAGAGATGTTTCAGGGAGCGCTGGGTTGAGAAGTCCAAGCGGT
GATGAGTCAAAAATCATATAGATTGGTAGGTGTAGAGTTGTGCATGTGCT
CGGACATTTGCGTGCTGATGTACGTGCCTGCGGTATGCACAAGAAAAAAG
GGGACGAGCGGGGGGGAAGGTTCTAGAGACCAGTATGAGGAAGAGACGAG
ATACAGTTGACTCACTACAGTAGTTCTCTTCCTAGCTTTCACAGAAAGAC
CTGAAAAGGTTACGACAAAGACGTAGTGCGTAACAACAAATAAAGAAAAG
AACACTGGGAAACTCTGA
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protein sequence of NO01G04470.1

>NO01G04470.1-protein ID=NO01G04470.1-protein|Name=NO01G04470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MGKKSARALAAAGKKGKGAGLTSDDERESVTSEASFLSQEAVEHPASAIV
DDSVAGSNSRVASPAYENEADFAEVLEKLAEKRTSTRETGLKELTAGLRS
YAFADAAQANREIIFSTLISLIRRGGEKEGVLCAEALGLMFLLIGPEEDE
IFMQIRGPLEYLVTRGQHEEVRVEAARALAMGSFICNTEEEVTLANLSFF
QGLFSGESEGERASEELKAAGVDSWALLATVAPNGYHTHELRVQLLEELL
GLLDASSAELKVAAGEGLALLREYWRQVPVASHDVSAEEEDLLESIVDRL
RDMAREGSKRMSRKDKKAQRASFREVYAAVAEGQPPEEVINFRTRSFRLT
SWVKMKQLESFRDCLQGGLLAAFGTNPVIHDVLEIDPASFETPSERRMVD
KNSELGKWRTTTRSRNRRTRESAKHHFTEDGEDS*
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Synonyms
Publications