NO01G04420, NO01G04420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04420 vs. NCBI_GenBank
Match: OLP79598.1 (Quinone oxidoreductase-like protein 2-like [Symbiodinium microadriaticum]) HSP 1 Score: 147.9 bits (372), Expect = 4.500e-32 Identity = 92/270 (34.07%), Postives = 144/270 (53.33%), Query Frame = 0 Query: 3 KPNEEHQHLQAVNEHATKKIMKETDGRVMSQAEVAELEALFANHERVKAFPVSHPLLDI----PASTQAKVVYFVRHAEALHN------EAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEAIQDSLDLVVVSPLRRTLMTAALAFDQRKG-TPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFLSTLFGEVLDCHEPDMKRWFENAELRAV 262 +P +E+ + + K + ET Q E L A KA+PV + A T K+++F+RH + HN + ++++ + Y+ P DP LT +G Q L+ A + +LVVVSP+ R LMT+ +AF G P++AHE +E+ N+CD RR+ ++ KQ++P++DF+ + ED + T H E+ E+A+R F+ WLR R E I V THSA+L +LF VL C +P + WF N E+R+V Sbjct: 772 RPQQEYAEFRGL-AALQKSLWTETSKETALQDGAKNRERLRAAKVLGKAWPVQMLCREADPSGKAPTSGKLLHFIRHGQGFHNSLNDFCKVYQVKAK-PYNIPEVFDPPLTEIGRQQAKALQS--RARETKAELVVVSPMSRALMTSNIAFAHCIGHVPFLAHESCKEKSHGNSCDYRRSASDAKQDFPNVDFSLIPEEDPLLST-LHMESDLEVAERAYDFMLWLRNRSETEIVVSTHSAWLFSLFNAVLKCDDPALSEWFVNGEMRSV 1036
BLAST of NO01G04420 vs. NCBI_GenBank
Match: EYU34175.1 (hypothetical protein MIMGU_mgv1a026782mg [Erythranthe guttata]) HSP 1 Score: 146.4 bits (368), Expect = 1.300e-31 Identity = 90/230 (39.13%), Postives = 124/230 (53.91%), Query Frame = 0 Query: 66 QAKVVYFVRHAEALHNEAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEA--IQDSLDLVVVSPLRRTLMTAALAF----------------------------DQRKGTPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFLS---TLFGEVLDCH---EPDMKRWFENAELR 260 + K ++ VRHA+ LHN A + + +AYS P F D ++T LG Q L+ V + + S++LVVVSPL RT+ TA F P+VA EL RER+G N CDKRR+++E +P+IDF+ + +DD W RET ++A+RGL FL WL R E I VVTHSA L T+FG+ DCH +P++ + F N ELR Sbjct: 14 RCKTIHLVRHAQGLHNVAGE-KEHSAYSSPDFFDAQITPLGWDQVDNLRKHVHSSGLSSSIELVVVSPLLRTMQTAVGVFGGEGYPDGIINAPPLMAEHILNNNRPAISSLNSPPFVAMELCRERLGVNWCDKRRSISEYTTLFPAIDFSLIESDDDTLWELDVRETNEDIARRGLKFLNWLWTREEREIAVVTHSALLMHTLTVFGD--DCHPSVKPEICKPFNNCELR 240
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_012841230.1 (PREDICTED: phosphoglycerate mutase-like protein 1 [Erythranthe guttata]) HSP 1 Score: 146.4 bits (368), Expect = 1.300e-31 Identity = 90/230 (39.13%), Postives = 124/230 (53.91%), Query Frame = 0 Query: 66 QAKVVYFVRHAEALHNEAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEA--IQDSLDLVVVSPLRRTLMTAALAF----------------------------DQRKGTPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFLS---TLFGEVLDCH---EPDMKRWFENAELR 260 + K ++ VRHA+ LHN A + + +AYS P F D ++T LG Q L+ V + + S++LVVVSPL RT+ TA F P+VA EL RER+G N CDKRR+++E +P+IDF+ + +DD W RET ++A+RGL FL WL R E I VVTHSA L T+FG+ DCH +P++ + F N ELR Sbjct: 14 RCKTIHLVRHAQGLHNVAGE-KEHSAYSSPDFFDAQITPLGWDQVDNLRKHVHSSGLSSSIELVVVSPLLRTMQTAVGVFGGEGYPDGIINAPPLMAEHILNNNRPAISSLNSPPFVAMELCRERLGVNWCDKRRSISEYTTLFPAIDFSLIESDDDTLWELDVRETNEDIARRGLKFLNWLWTREEREIAVVTHSALLMHTLTVFGD--DCHPSVKPEICKPFNNCELR 240
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_021721123.1 (phosphoglycerate mutase-like protein 1 [Chenopodium quinoa] >XP_021721124.1 phosphoglycerate mutase-like protein 1 [Chenopodium quinoa]) HSP 1 Score: 146.0 bits (367), Expect = 1.700e-31 Identity = 85/229 (37.12%), Postives = 130/229 (56.77%), Query Frame = 0 Query: 66 QAKVVYFVRHAEALHNEAFKIRGRAAY-SDPAFLDPELTALGIAQCGTLKPSVEA--IQDSLDLVVVSPLRRTLMTAALAF--DQRKG------------------------TPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFL-STLFGEVLDCH---EPDMKRWFENAELRAV 262 + K+++ VRHAE +HN + G Y + P LDP L+ LG Q L+ V A + + ++LV+ SP+ RT+ TAA+ F D K P++AHEL RER+G NTCDKR +++E K +P+IDF+ + ++D+ W RE+ E++ RG+ F++WL R E I +VTHSAFL TL V +CH + ++ ++F N+ELR+V Sbjct: 14 RCKILHLVRHAEGIHN----VAGAEKYKTSPELLDPRLSPLGWEQVENLQKHVHACGLLERIELVITSPMLRTMQTAAIVFGGDNHKNGNGASPLMLENGKNDHATVSSLNCPPFLAHELCRERLGVNTCDKRGSISEYKSLFPAIDFSLIESDEDILWKEDVRESDEEVSARGMKFMKWLWTREEKEIAIVTHSAFLFQTLPKFVYNCHPSTKNEICKFFANSELRSV 238
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_022936705.1 (LOW QUALITY PROTEIN: phosphoglycerate mutase-like protein [Cucurbita moschata]) HSP 1 Score: 144.8 bits (364), Expect = 3.800e-31 Identity = 95/274 (34.67%), Postives = 144/274 (52.55%), Query Frame = 0 Query: 34 AEVAELEALFANHERVKAFPVSH-PL----------LDIPASTQAKVVYFVRHAEALHNEAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEA--IQDSLDLVVVSPLRRTLMTAALAF---DQRKGT------------------------PWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFLSTL---FGEVLDCH---EPDMKRWFENAELRAV 262 A + + ++F H V P SH P L + + K ++ VRHA+A+HN A + + R+ + D L+ LG Q L V + I +++LV+VSPL RT+ TA AF + + GT P++A EL RER+G N CDKR +++E + +P+IDF+ + H+DD+ WTP RE+ ++ +RGL FL+WL R E I +VTHSAFL L FG DCH + ++ ++F N ELR++ Sbjct: 63 APILPVPSVFELHRCVLPSPFSHLPALFRYMESAGGLSLYPLHRCKTIHLVRHAQAVHNVAME-KDRSLLQSYDYFDARLSDLGWQQVDNLGKHVRSCGISKTIELVIVSPLLRTMQTAVGAFGGDEYKDGTNVPPLMVANAGGSNHPAISSLNCPPFLAVELCRERLGVNPCDKRSSISEYRSLFPAIDFSVIEHDDDILWTPDTRESNDQIVERGLKFLDWLWTRKETEIAIVTHSAFLFELLKCFGN--DCHPSIKSEISKFFTNCELRSM 333
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_022849612.1 (phosphoglycerate mutase-like protein 1 isoform X2 [Olea europaea var. sylvestris]) HSP 1 Score: 144.4 bits (363), Expect = 4.900e-31 Identity = 91/228 (39.91%), Postives = 119/228 (52.19%), Query Frame = 0 Query: 68 KVVYFVRHAEALHNEAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEA--IQDSLDLVVVSPLRRTLMTAALAF---------------------------DQRKGTPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFL-STLFGEVLDCHEPDMK----RWFENAELRAV 262 K ++ VRHA+ +HN A ++ +AY P D LT LG Q L+ V + + ++LVVVSPL RT+ TA F P+VA EL RE +G + CDKRR++T+ KQ +P+IDF+ + +DD+ W P RE E+A RGL FL WL R E I VVTHS FL TL DCH P MK R F+N ELR+V Sbjct: 74 KTIHLVRHAQGIHNVAGEL-DHSAYLSPELFDAHLTPLGWQQVDNLRKHVHSSGLSKRIELVVVSPLLRTMQTAVAVFGGQGYMDGIDVAPLMVENVGKSSRPAISSLNSPPFVAVELCREHLGVHWCDKRRSITDYKQLFPAIDFSLIESDDDILWKPDVREANEEVAARGLKFLNWLWTRKEKEIAVVTHSGFLIHTLGAFGNDCH-PTMKSEICRPFKNCELRSV 299
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_022849611.1 (phosphoglycerate mutase-like protein 1 isoform X1 [Olea europaea var. sylvestris]) HSP 1 Score: 144.4 bits (363), Expect = 4.900e-31 Identity = 91/228 (39.91%), Postives = 119/228 (52.19%), Query Frame = 0 Query: 68 KVVYFVRHAEALHNEAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEA--IQDSLDLVVVSPLRRTLMTAALAF---------------------------DQRKGTPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFL-STLFGEVLDCHEPDMK----RWFENAELRAV 262 K ++ VRHA+ +HN A ++ +AY P D LT LG Q L+ V + + ++LVVVSPL RT+ TA F P+VA EL RE +G + CDKRR++T+ KQ +P+IDF+ + +DD+ W P RE E+A RGL FL WL R E I VVTHS FL TL DCH P MK R F+N ELR+V Sbjct: 84 KTIHLVRHAQGIHNVAGEL-DHSAYLSPELFDAHLTPLGWQQVDNLRKHVHSSGLSKRIELVVVSPLLRTMQTAVAVFGGQGYMDGIDVAPLMVENVGKSSRPAISSLNSPPFVAVELCREHLGVHWCDKRRSITDYKQLFPAIDFSLIESDDDILWKPDVREANEEVAARGLKFLNWLWTRKEKEIAVVTHSGFLIHTLGAFGNDCH-PTMKSEICRPFKNCELRSV 309
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_021722530.1 (phosphoglycerate mutase-like protein 1 [Chenopodium quinoa] >XP_021722531.1 phosphoglycerate mutase-like protein 1 [Chenopodium quinoa]) HSP 1 Score: 144.1 bits (362), Expect = 6.400e-31 Identity = 84/229 (36.68%), Postives = 127/229 (55.46%), Query Frame = 0 Query: 66 QAKVVYFVRHAEALHNEAFKIRGRAAY-SDPAFLDPELTALGIAQCGTLKPSVE--AIQDSLDLVVVSPLRRTLMTAALAF--DQRKG------------------------TPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFL-STLFGEVLDCH---EPDMKRWFENAELRAV 262 + K+++ VRHAE +HN + G Y + P LDP L+ G Q L+ V A+ ++LV+ SP+ RT+ TAA+ F D K P++AHEL RER+G NTCDKR +++E K +P+IDF+ + ++D+ W RE+ E++ RG+ F++WL R E I +VTHS FL TL V DCH + ++ ++F N+ELR+V Sbjct: 14 RCKILHLVRHAEGIHN----VAGAEKYKTSPKLLDPRLSPHGWEQVENLRKHVHACALLQRIELVITSPMLRTMQTAAIVFGGDNHKNGNGASPLMLENGKNDHATVSSLNCPPFLAHELCRERLGVNTCDKRGSISEYKSLFPAIDFSLIESDEDILWKADVRESDEEVSARGMKFMKWLWTREEKEIAIVTHSVFLFQTLRKFVYDCHPSTKSEICKFFANSELRSV 238
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_002296744.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86945.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 143.3 bits (360), Expect = 1.100e-30 Identity = 87/276 (31.52%), Postives = 149/276 (53.99%), Query Frame = 0 Query: 11 LQAVNEHATKKIMKETDGRVMSQAEVAELEALFANHERVKAFPVSHPLLDIPASTQAKVVYFVRHAEALHN---EAFKIRGRAAYSD-----------PAFLDPELTALGIAQCGTLKPSVEAIQDSLDLVVVSPLRRTLMTAALAF-DQR-----KGTPWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPH--HRETPAEMAKRGLIFL-EWLRGRPEARIGVVTHSAFLSTLFGEVLDCHEPDMKRWFENAELRAVRL 264 L A++ H + +I+ E + S + + ++ +FP + +++ K+++F RH + HN + ++ G+ D P FLDP LTALG+ QC + + ++ +LV+VSP+ R + TA L+F D R + PWV+HE RE +G +KRR + EI+ +YP IDF+ + H +DV W + RET E ++R FL E++R RPE I ++ HSA+L TL V+D + +++ WF +E+R++++ Sbjct: 970 LGALDVHRSVQIVGECVSKECSLGDCVLDDGNDEKSDKDDSFPTA------TSTSDTKIIHFQRHGQGYHNLICDMWREAGKPIDFDSSDPNLNPVVRPEFLDPPLTALGMQQCSSQRGLCASLNP--ELVIVSPMLRCIQTARLSFRDHRNDAEGREVPWVSHEGCREELGLLQGNKRRPIDEIQADYPDIDFSPIKHNEDVLWNEYGTRRETLMEKSERIYSFLTEYVRSRPEKEIAIICHSAYLFTLLNAVMDVEKEELRSWFLTSEVRSLKM 1237
BLAST of NO01G04420 vs. NCBI_GenBank
Match: XP_010467488.1 (PREDICTED: phosphoglycerate mutase-like protein [Camelina sativa]) HSP 1 Score: 142.9 bits (359), Expect = 1.400e-30 Identity = 89/250 (35.60%), Postives = 131/250 (52.40%), Query Frame = 0 Query: 45 NHERVKAFPVSHPLLDIPASTQAKVVYFVRHAEALHNEAFKIRGRAAYSDPAFLDPELTALGIAQCGTLKPSVEAIQ--DSLDLVVVSPLRRTLMTAALAFDQRKGT---------------------------PWVAHELVRERIGKNTCDKRRALTEIKQEYPSIDFAHMTHEDDVCWTPHHRETPAEMAKRGLIFLEWLRGRPEARIGVVTHSAFLSTL---FG-EVLDCHEPDMKRWFENAELRAV 262 NHE + +P+ + K ++ VRHA+ +HN A + + +AYS + D LT LG Q L+ V Q + ++LV+VSPL RT+ TA AF + T P++A EL RE +G + CD+RR++TE K +P+IDF+ + ++DV W P RETP E+A RG+ F +WL R E I VV+HS FL L FG + D + ++ F+N ELR+V Sbjct: 3 NHESIGLYPLH----------RCKTIHLVRHAQGIHNVAGE-KDHSAYSSEDYFDARLTPLGWQQVDNLRNHVREAQLLNKVELVIVSPLLRTIQTAVGAFGGEEDTDGADATPLMVANAGSSDRPAISSLNVPPFLAVELCRETMGDHPCDRRRSVTEYKALFPAIDFSIIESDEDVLWKPSPRETPEEVAARGVEFFKWLWTRKEKEIAVVSHSGFLHGLLSSFGKDCADDIKKELSLHFKNCELRSV 241 The following BLAST results are available for this feature:
BLAST of NO01G04420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04420 ID=NO01G04420|Name=NO01G04420|organism=Nannochloropsis oceanica|type=gene|length=1188bpback to top protein sequence of NO01G04420.1 >NO01G04420.1-protein ID=NO01G04420.1-protein|Name=NO01G04420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=266bpback to top Synonyms
Publications
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