NO01G04350, NO01G04350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04350 vs. NCBI_GenBank
Match: GAX29072.1 (ubiquitin-conjugating enzyme E2 variant [Fistulifera solaris]) HSP 1 Score: 186.0 bits (471), Expect = 2.000e-43 Identity = 92/186 (49.46%), Postives = 119/186 (63.98%), Query Frame = 0 Query: 149 PADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHL--TKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKL 333 PA L T+A S V +D SG+ HWSVDNYG+G+TP++G +I AFQGHH APWTIT R FCNNV+K+ A + ++ + P LFA F L++LSQEFHK SH+ ++ P W LQ +GL +SRK HG HH P+E NY I++G N LD++G FR LE +Y GV N WKL Sbjct: 126 PAALQTTSLTLA-SWVLADLGSGILHWSVDNYGNGRTPIMGGIIAAFQGHHSAPWTITQRGFCNNVYKLCLPFGLAPVTLLTWLGAGPQTILFATTFCVLEILSQEFHKWSHMLGSETPGWVNRLQALGLTVSRKTHGLHHLAPYEGNYSIISGVTNRILDQTGFFRRLEHLIYRWNGVEANAWKL 310
BLAST of NO01G04350 vs. NCBI_GenBank
Match: PTQ41486.1 (hypothetical protein MARPO_0034s0071 [Marchantia polymorpha]) HSP 1 Score: 183.7 bits (465), Expect = 1.000e-42 Identity = 95/230 (41.30%), Postives = 132/230 (57.39%), Query Frame = 0 Query: 113 LESTWVHRMHVATHYIVTLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKLGGPKFQAE 341 LEST HR+ V + L + T+ +P D A++ + + SD +GV+HW VDNYG KTPV G+ I+AFQGHH PWTIT R+F NN+H I + + +A L PSNP L F LF V+SQ+FH SH+ K P + LQD G+++SRK HG HH +P++ NYCI++G N FLD++ +F LE ++ GV P W P++ E Sbjct: 8 LESTMEHRLWVGAGAASVMGLLAKAVTA-----SHSPEDAAVICVSALAAYSLSDLGTGVYHWGVDNYGDAKTPVFGSQIDAFQGHHKRPWTITKRQFANNIHAIAR-PVALFLAPFLALPSNPALDTFLGLFLGFVVMSQQFHAWSHMKKSQLPPLVIALQDRGILVSRKMHGAHHRSPYDINYCIVSGLWNPFLDKNRIFPSLEAFIHSNYGVAPRSWAETQPEWLQE 231
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_002502581.1 (hypothetical protein MICPUN_58724 [Micromonas commoda] >ACO63839.1 hypothetical protein MICPUN_58724 [Micromonas commoda]) HSP 1 Score: 181.8 bits (460), Expect = 3.800e-42 Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 0 Query: 146 GATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 G PA A L+ + + SD +GVFHWSVDNYGS TPV+G +I+AFQGHH PWTIT R+F NN+H T+ + ++L P F +F ++ VLSQ+FH SH+ K P V LQD+G++ISRK HG HH PFE NYCI++G N LD++ F +E+ V+E TGV P CW Sbjct: 131 GGDPAAWASLVGSGLLAYWLSDLGTGVFHWSVDNYGSKATPVMGGIIDAFQGHHKYPWTITKRQFANNIHTTCPATMCVTVPLLLTPGLAPDTCAFMGVFCSMIVLSQQFHAWSHMKKSQLPEIVVKLQDLGVLISRKGHGAHHRPPFEGNYCIVSGWWNPILDDNKFFNKMEKVVFEATGVAPRCW 317
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_003059239.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH56371.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 181.0 bits (458), Expect = 6.500e-42 Identity = 90/188 (47.87%), Postives = 114/188 (60.64%), Query Frame = 0 Query: 145 GGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 GG P A L+A + SD +G+FHWSVDNYGS +TPV+G VI+AFQGHH PWTIT R+F NN H T + ++L P +F +F ++ VLSQ+FH SH K PA + QD GL+ISRK HGQHH PFE YCI++G N LD SG+ + ER +Y+ TGV CW Sbjct: 133 GGDDPLAYASLLAAAVGAWWLSDLGTGIFHWSVDNYGSKQTPVMGDVIDAFQGHHKYPWTITKRQFANNTHTTCPATSCVTIPLLLTPDLGPNACVFMGVFCSMVVLSQQFHAWSHAKKSELPALVIAAQDAGLVISRKAHGQHHKPPFEGRYCIVSGWWNDALDGSGVLKRAERFIYDTTGVAARCW 320
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_007510584.1 (predicted protein [Bathycoccus prasinos] >CCO18117.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 179.5 bits (454), Expect = 1.900e-41 Identity = 106/275 (38.55%), Postives = 152/275 (55.27%), Query Frame = 0 Query: 66 SRSTSPDLDLLPLTLEPASFSIDPASIETRVKRKGPXXXXXXXAGDVLE--STWVHRMHVATHY-IVTLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPL-----LTLFAILFFNLQVLSQEFHKISHL--TKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 SRS+S D + +++ F++ A +E + RK D + ST R+ H+ I +L+A++ V +V G A A AT+ S +D +G+FHWSVDNYG TPV G VI+AFQGHH PWTIT R++ NN+HK + + +L+ + + LF F+ L VLSQ+ H +H+ ++ P LQDM L+++RK+HG HH +PFE +YCI+ G N LD+S FR LER +YE TGV P CW Sbjct: 65 SRSSSDD-GSIRCSIDGDEFTVSKAEMEAELLRKKMASMGGEMLRDPKDFVSTRGQRVQCGVHFGICSLLAMRGVYLDAIVMDGDVGAIAARAFATLFASYALADLGTGIFHWSVDNYGDKNTPVAGNVIDAFQGHHRWPWTITKRQWANNIHKTCIAPLLFTVPQLLVFGGSDMQGSGDSDLFFGSFWALVVLSQQTHAWAHMKPSEQPKIVTKLQDMNLMLTRKDHGAHHRSPFEGHYCIVNGWWNPLLDDSRFFRKLERMIYEGTGVAPRCW 338
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_003081311.1 (Kua-ubiquitin conjugating enzyme hybrid,localisation [Ostreococcus tauri] >CAL55480.1 Kua-ubiquitin conjugating enzyme hybrid,localisation [Ostreococcus tauri]) HSP 1 Score: 179.1 bits (453), Expect = 2.500e-41 Identity = 88/183 (48.09%), Postives = 118/183 (64.48%), Query Frame = 0 Query: 151 DLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAV-VLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 + A +AT A + SD +G+FHWSVDNYGS TP+LG VI+AFQGHH PWTIT R++ NN+H T P + LL P +F +F L VLSQ+FH SH+ K P+ + QD+GL++ R++HGQHH PFE +YCI++G N LD+SG FR LE+ +++ TGV P CW Sbjct: 117 EAAAALATAALAYWTSDLGTGIFHWSVDNYGSKDTPLLGKVIDAFQGHHKYPWTITKRQWANNIH--TTCVAPLVFTTPTLLLNDRPTDLIFVGVFTALIVLSQQFHAWSHMKKSELPSAVLAAQDIGLLVGRRDHGQHHKAPFEGHYCIVSGYWNPILDDSGFFRKLEQMIFKATGVAPRCW 297
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_005535822.1 (similar to ubiquitin-conjugating enzyme E2 variant [Cyanidioschyzon merolae strain 10D] >BAM79536.1 similar to ubiquitin-conjugating enzyme E2 variant [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 179.1 bits (453), Expect = 2.500e-41 Identity = 83/192 (43.23%), Postives = 123/192 (64.06%), Query Frame = 0 Query: 152 LAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVL-------LHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKLGGPK 337 +A+ AT F+ + +DF SG++H+ +DNYGS +TP+ G I AFQGHH PWTIT+R+FCNNV K ++ ++ V ++ L F+ +FF +QEFHK SH+ +PP++A+ LQ G +IS++ HGQHH +P+ YCI++G CN LD++G FR LE ++ VTGV P W+LG + Sbjct: 196 VALEGATALFAYIMADFASGIYHFFLDNYGSRETPIFGEQIAAFQGHHQYPWTITHRDFCNNVFKSCVNSLLPLLLVAFSGAWGTSAEWTSIYLRSFSCVFFLSVAFAQEFHKWSHMIRPPSFAMFLQRSGWLISQRAHGQHHQSPYHEKYCIISGWCNQLLDDTGFFRGLEMLIWHVTGVEPLTWRLGASR 387
BLAST of NO01G04350 vs. NCBI_GenBank
Match: OUS48823.1 (ubiquitin-conjugating enzyme [Ostreococcus tauri]) HSP 1 Score: 179.1 bits (453), Expect = 2.500e-41 Identity = 88/183 (48.09%), Postives = 118/183 (64.48%), Query Frame = 0 Query: 151 DLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAV-VLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 + A +AT A + SD +G+FHWSVDNYGS TP+LG VI+AFQGHH PWTIT R++ NN+H T P + LL P +F +F L VLSQ+FH SH+ K P+ + QD+GL++ R++HGQHH PFE +YCI++G N LD+SG FR LE+ +++ TGV P CW Sbjct: 117 EAAAALATAALAYWTSDLGTGIFHWSVDNYGSKDTPLLGKVIDAFQGHHKYPWTITKRQWANNIH--TTCVAPLVFTTPTLLLNDRPTDLIFVGVFTALIVLSQQFHAWSHMKKSELPSAVLAAQDIGLLVGRRDHGQHHKAPFEGHYCIVSGYWNPILDDSGFFRKLEQMIFKATGVAPRCW 297
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_001419607.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO97900.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 177.6 bits (449), Expect = 7.200e-41 Identity = 86/179 (48.04%), Postives = 115/179 (64.25%), Query Frame = 0 Query: 154 MLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 M + T+ + SD +G+FHWSVDNYGS TP+LG VI+AFQGHH PWTIT R++ NNVH + +LL+ L +F +F +L VLSQ+FH SH+ K P + QDMGL++ R++HGQHH +PFE +YCI++G N LD SG FR LE+ V++ TG P CW Sbjct: 1 MAVGTIGLAYWTSDLGTGIFHWSVDNYGSKATPLLGGVIDAFQGHHKYPWTITKRQWANNVHTTCVAPLVFTTPTLLLNDRATDL-IFVGVFTSLIVLSQQFHAWSHMKKSELPPLVLKAQDMGLLVGRRDHGQHHKSPFEGHYCIVSGYWNPILDGSGFFRALEQAVFKATGTAPRCW 178
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_002949397.1 (hypothetical protein VOLCADRAFT_89823 [Volvox carteri f. nagariensis] >EFJ49416.1 hypothetical protein VOLCADRAFT_89823 [Volvox carteri f. nagariensis]) HSP 1 Score: 176.8 bits (447), Expect = 1.200e-40 Identity = 93/208 (44.71%), Postives = 122/208 (58.65%), Query Frame = 0 Query: 128 IVTLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPL-LTLFAILFFNLQVLSQEFHKISHLTK---PPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWK 332 I + A Q AT V + D+ + + + + SD +G++HW VDNYG G TPV G I AFQGHH PWTIT REF NN+H++ A A++ L P PL ++ F L +SQ+FH SH+ K PPA V LQD GL+I R+ HG HH PFE NYCI++G N LD SG FR LE+ +++ TGV P CW+ Sbjct: 190 IAMIAATLQQATKQV----ESVEDMVVFGGAVLLAYILSDLGTGIYHWGVDNYGDGNTPVFGRQIAAFQGHHQRPWTITQREFANNLHQVFGPASYAAAALLSLSPVMPLGWNAWSSSFLFLVCMSQQFHAWSHMKKSELPPA-VVALQDSGLLIGRRMHGAHHKAPFEGNYCIVSGWWNPLLDSSGFFRALEKLIHDRTGVAPRCWE 392 The following BLAST results are available for this feature:
BLAST of NO01G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04350 ID=NO01G04350|Name=NO01G04350|organism=Nannochloropsis oceanica|type=gene|length=1095bpback to top protein sequence of NO01G04350.1 >NO01G04350.1-protein ID=NO01G04350.1-protein|Name=NO01G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bpback to top Synonyms
Publications
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