NO01G04350, NO01G04350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04350 vs. NCBI_GenBank
Match: EWM29378.1 (Kua-ubiquitin conjugating enzyme hybrid, localization [Nannochloropsis gaditana]) HSP 1 Score: 431.4 bits (1108), Expect = 2.800e-117 Identity = 229/361 (63.43%), Postives = 266/361 (73.68%), Query Frame = 0 Query: 11 ATLALSAAAVRGFVLPTRPMSRSQHHLRRPLASVRLTQDVEVLQSVVQAPE---------MQEGSRSTSPDLDLLPLTLE---PASFSIDPASIETRVKRKGPXXXXXXXAGDVLESTWVHRMHVATHYIVTLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKLGGPKFQAEMLLRSRGGADVATVETKKE 360 ATLA+ A AV GFV+P P SR H P +S R + V+VLQS + + G + P D ++ E P S D +E XXXX GDVLES+W+HR +VATHY+VTL A+QQVA++Y GG TP DL ML AT AFS++FSDFFSG+FHWSVDNYG+GKTPVLG VIEAFQGHHDAPWTITYR+F NNVHKITKITIPAM+A+V LHPS+PL+TLFA LFFNLQVLSQEFHK+SHL+KPPAWAV LQD+GLIISRKEHGQHHS+PFESNYCILTGTCN LDESG FR LE+ VY+VTGVMPNCWK G +F+AEML+ RGGAD V+ K E Sbjct: 10 ATLAIGAVAVHGFVIPA-PSSRRISH--DPWSSTRFLRYVDVLQSTTLPSDTPGISSNSIVTNGLYPSDPVDDASCVSTETNLPISLRND-RIVEKXXXXXXXXXXXMVADGDVLESSWIHRSYVATHYLVTLAAMQQVASTYAGNGGVTPGDLTMLAATTAFSVLFSDFFSGIFHWSVDNYGNGKTPVLGTVIEAFQGHHDAPWTITYRQFSNNVHKITKITIPAMLAIVALHPSSPLVTLFATLFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFESNYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWKQGSSEFRAEMLVGRRGGADANMVDEKME 366
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_005854236.1 (hypothetical protein NGA_0194500 [Nannochloropsis gaditana CCMP526] >EKU22127.1 hypothetical protein NGA_0194500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 419.9 bits (1078), Expect = 8.300e-114 Identity = 195/250 (78.00%), Postives = 220/250 (88.00%), Query Frame = 0 Query: 110 GDVLESTWVHRMHVATHYIVTLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKLGGPKFQAEMLLRSRGGADVATVETKKE 360 GDVLES+W+HR +VATHY+VTL A+QQVA++Y GG TP DL ML AT AFS++FSDFFSG+FHWSVDNYG+GKTPVLG VIEAFQGHHDAPWTITYR+F NNVHKITKITIPAM+AVV LHPS+PL+TLFA LFFNLQVLSQEFHK+SHL+KPPAWAV LQD+GLIISRKEHGQHHS+PFESNYCILTGTCN LDESG FR LE+ VY+VTGVMPNCWK G +F+AEML+ RGGAD V+ K E Sbjct: 5 GDVLESSWIHRSYVATHYLVTLAAMQQVASTYAGNGGVTPGDLTMLAATTAFSVLFSDFFSGIFHWSVDNYGNGKTPVLGTVIEAFQGHHDAPWTITYRQFSNNVHKITKITIPAMLAVVALHPSSPLVTLFATLFFNLQVLSQEFHKLSHLSKPPAWAVRLQDLGLIISRKEHGQHHSSPFESNYCILTGTCNRMLDESGFFRFLEKAVYDVTGVMPNCWKQGSSEFRAEMLVGRRGGADANMVDEKME 254
BLAST of NO01G04350 vs. NCBI_GenBank
Match: EJK46293.1 (hypothetical protein THAOC_35043 [Thalassiosira oceanica]) HSP 1 Score: 202.2 bits (513), Expect = 2.700e-48 Identity = 104/227 (45.81%), Postives = 139/227 (61.23%), Query Frame = 0 Query: 110 GDVLESTWVHRMHVATHYIV-TLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKI-TKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKP--PAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKL 333 GD LE+T V++ + V A + T + G A +AT+ S V +DF SG+FHWSVDNYG+G+TP++G +I AFQGHH APWTI YR FCNNV+K+ IP + A+ L N + LF F ++++SQE HK SH TK P+ +LQD+G+ I R H +HH+ PFE NYCI++G CN LD SG FR +E VY++ GV N WKL Sbjct: 95 GDSLETTPFQVGLVSSTFAVQAFFAANAIHTLFEQTNGDVGQTAAFSVATVVASWVAADFGSGIFHWSVDNYGNGRTPIMGNIIAAFQGHHSAPWTIAYRGFCNNVYKLCIPFGIPTVAAINYLSGDNSMAALFFTFFCWIEIMSQELHKWSHQTKAEVPSIVNVLQDLGITIGRVPHAKHHTAPFEGNYCIVSGLCNETLDRSGFFRWMEHTVYKINGVESNAWKL 321
BLAST of NO01G04350 vs. NCBI_GenBank
Match: CEM05794.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 199.9 bits (507), Expect = 1.400e-47 Identity = 130/334 (38.92%), Postives = 182/334 (54.49%), Query Frame = 0 Query: 13 LALSAAAVRGFVLPTRPMSRSQHHL---------RRPLASVRLTQDVEVLQSVVQAPEM-----QEGSRSTSPDLDLLPLTLEPASFSIDPASIETRVKRKGPXXXXXXXAGDVLESTWVHRMHVATHYIVTLVALQQVATSYVVKGGATPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKL 333 +A ++ V GFV P+ +R++ + R+P S + VE VV + S P+ +L T E + S PA+ KR+ P + +ST V Y +AL +A + +V + PA ++++ + F+L+F D FSGVFHW+VDNYG+ TPV G+VIE FQGHH PWTITYR F NNV+KI + +MA + + P + +F +F QV++QEFHK SH+TKPP LQ MGL++ RKEHG HHS PFE +Y IL G N LD S +FR++ER +Y+ G MPN WKL Sbjct: 10 VATTSVGVLGFVPPSVTPTRAKQGMWPLSVPRASRQPATSASPSSVVEDALGVVNGESNIRYTDYVETASFPPESSVLS-TAEVSEESAAPAA----PKRRRPLSKDPQLIVEG-DSTQVTPYQQLVTYGTLALALAAIAQA-LVSDASNPALMSLM---VPFALLFGDLFSGVFHWAVDNYGNKNTPVFGSVIEGFQGHHKYPWTITYRPFANNVYKIC-YGVLLIMATTFILQAPPAVRVFMTVFGLSQVMAQEFHKYSHMTKPPIIVQRLQGMGLMLPRKEHGLHHSEPFEGHYSILFGWFNPLLDHSQVFRLMERAIYKWNGHMPNSWKL 332
BLAST of NO01G04350 vs. NCBI_GenBank
Match: CBJ27287.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 199.1 bits (505), Expect = 2.300e-47 Identity = 94/185 (50.81%), Postives = 117/185 (63.24%), Query Frame = 0 Query: 148 TPADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKL 333 +P + A +D SGVFHWSVDNYG G TPV GAVIEAFQGHH +PWTITYR F NNVHKI +P + + L++P P + F ++S EFH+ +H+T PP LQ G+ +SRKEHG+HHS+PFE YCI+TG CN LD +FR +ER VYE+ GV P WKL Sbjct: 25 SPLEALWTAAGAFVGYTIADLVSGVFHWSVDNYGDGSTPVFGAVIEAFQGHHGSPWTITYRPFENNVHKIAYAVLPLLALLRLVNP-GPAGVALGVAFLVGSLMSNEFHRFAHMTSPPPIVRALQKFGVTVSRKEHGRHHSSPFEEKYCIVTGVCNGPLDHFRVFRFMERVVYELNGVEPIAWKL 208
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_002287448.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94891.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 196.4 bits (498), Expect = 1.500e-46 Identity = 92/173 (53.18%), Postives = 121/173 (69.94%), Query Frame = 0 Query: 162 SLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKI-TKITIPAMMAV-VLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTK--PPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 S V +DF SGVFHWSVDNYG+G+TPV+G++I AFQGHH APWTITYR FCNNV K+ +P + A+ + P N ++TLF F ++++SQE HK SH+TK PA+ LQ +G+ I+R H QHH P++ NYCI++G CN LD+SG FR +E VYE+ GV N W Sbjct: 2 SWVLADFGSGVFHWSVDNYGNGRTPVMGSIIAAFQGHHSAPWTITYRGFCNNVWKLCIPFGLPTVAAISYIAGPENSMVTLFFTFFCAIEIMSQELHKWSHMTKKETPAFVNTLQALGVTIARVPHAQHHLAPYDGNYCIVSGLCNETLDKSGFFRWMEHKVYELNGVESNAW 174
BLAST of NO01G04350 vs. NCBI_GenBank
Match: GAX16603.1 (ubiquitin-conjugating enzyme E2 variant [Fistulifera solaris]) HSP 1 Score: 191.0 bits (484), Expect = 6.300e-45 Identity = 94/186 (50.54%), Postives = 121/186 (65.05%), Query Frame = 0 Query: 149 PADLAMLMATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHL--TKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKL 333 PA L M T+A S V +D SG+ HWSVDNYG+G+TP++G +I AFQGHH APWTIT R FCNNV+K+ A + ++ L + P LFA F L++LSQEFHK SH+ ++ P W LQ +GL +SRK HG HH P+E NY I++G N LD++G FR LE +Y GV N WKL Sbjct: 126 PAALQMTSLTLA-SWVLADLGSGILHWSVDNYGNGRTPIMGGIIAAFQGHHSAPWTITQRGFCNNVYKLCLPFGLAPVTLLTLLGAGPQTILFATTFCVLEILSQEFHKWSHMLGSETPGWVNRLQSLGLTVSRKTHGLHHLAPYEGNYSIISGVTNRVLDQTGFFRRLEHLIYRWNGVEANAWKL 310
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_002185277.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43146.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 186.8 bits (473), Expect = 1.200e-43 Identity = 90/170 (52.94%), Postives = 110/170 (64.71%), Query Frame = 0 Query: 164 VFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKI-TKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTK--PPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCW 331 V +DF SGV HW+ DNYG+GKTPV+G +I AFQGHH APWTI R FCNNV+K+ I M+A+ + P P + F F +++SQEFHK SH K P W LQD GL I+RK H HH PFE NYCI++G CN LD+SG FR LER VY + G+ N W Sbjct: 2 VIADFGSGVLHWATDNYGNGKTPVMGGIIAAFQGHHSAPWTIAQRGFCNNVYKLCIPFGIVPMLAINAIAP--PDVVFFMATFCVFEIMSQEFHKWSHQLKSETPGWVNWLQDSGLTIARKPHALHHLAPFEGNYCIISGICNPVLDQSGFFRRLERVVYSLNGIESNAW 169
BLAST of NO01G04350 vs. NCBI_GenBank
Match: OEU23084.1 (hypothetical protein FRACYDRAFT_177929 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 186.8 bits (473), Expect = 1.200e-43 Identity = 89/180 (49.44%), Postives = 120/180 (66.67%), Query Frame = 0 Query: 156 MATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKI-TKITIPAMMAVVLLHPSNPLLTLFAILFFNLQVLSQEFHKISHLTKPPAWAV--MLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNCWKL 333 M+ S +D SGV HWSVDNYG+G+TP++G +I AFQGHH APWTIT REF NNV K+ I ++A+ L+ TLF +F +++LSQEFHK+SH TK A V +LQ+ G+ I RK+H QHH P++ NYCI++G CN +DESG+FR +E +Y + G+ N WKL Sbjct: 1 MSITLTSWALADLGSGVLHWSVDNYGNGRTPIMGGIIAAFQGHHSAPWTITEREFENNVSKLCVPFGIQTVLALKLVFGLGSYSTLFLTVFCLMEILSQEFHKMSHTTKSEAGPVWNLLQEKGISIPRKQHAQHHIAPYDGNYCIVSGICNEKVDESGVFRRMEHIIYNLNGIESNAWKL 180
BLAST of NO01G04350 vs. NCBI_GenBank
Match: XP_005826032.1 (hypothetical protein GUITHDRAFT_76752 [Guillardia theta CCMP2712] >EKX39052.1 hypothetical protein GUITHDRAFT_76752 [Guillardia theta CCMP2712]) HSP 1 Score: 186.0 bits (471), Expect = 2.000e-43 Identity = 93/179 (51.96%), Postives = 119/179 (66.48%), Query Frame = 0 Query: 156 MATMAFSLVFSDFFSGVFHWSVDNYGSGKTPVLGAVIEAFQGHHDAPWTITYREFCNNVHKITKITIPAMMAVVLLHPSNPLLTLF---AILFFNLQVLSQEFHKISHL--TKPPAWAVMLQDMGLIISRKEHGQHHSNPFESNYCILTGTCNSFLDESGLFRVLERGVYEVTGVMPNC 330 ++ +A F+DF SGV+HW++DNYG+ TPV G IEAFQGHH+ PWTITYR+ CNN++KI + T P +A +LL NP L L+ AI F N LSQE HK SH+ ++ AW LQD +I+SRK H HH PF+ NYCI++G CNS LD SG FR LE V+ +TG P C Sbjct: 5 LSAVALGYEFADFGSGVYHWAMDNYGTKNTPVFGTQIEAFQGHHELPWTITYRQVCNNIYKICQATSPFCLAGILL-LDNPYLILWMTTAICFIN---LSQELHKWSHMSPSQVSAWINFLQDWNVIVSRKSHLAHHRPPFDGNYCIVSGHCNSLLDNSGFFRGLESIVFSITGNKPRC 179 The following BLAST results are available for this feature:
BLAST of NO01G04350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04350 ID=NO01G04350|Name=NO01G04350|organism=Nannochloropsis oceanica|type=gene|length=1095bpback to top protein sequence of NO01G04350.1 >NO01G04350.1-protein ID=NO01G04350.1-protein|Name=NO01G04350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bpback to top Synonyms
Publications
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