NO01G04340, NO01G04340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_005854232.1 (peptidyl-prolyl cis-trans isomerase fkbp2-like protein [Nannochloropsis gaditana CCMP526] >EKU22123.1 peptidyl-prolyl cis-trans isomerase fkbp2-like protein [Nannochloropsis gaditana CCMP526] >EWM29373.1 peptidyl-prolyl cis-trans isomerase, FKBP-type [Nannochloropsis gaditana]) HSP 1 Score: 269.2 bits (687), Expect = 1.100e-68 Identity = 125/149 (83.89%), Postives = 138/149 (92.62%), Query Frame = 0 Query: 67 MYRKVFFITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGITSPDSGKEF 216 M R++FF+T+ A+V LTASAKQGDGVDLDP EK+R+GVKFRP+ CD+KSKKGD LSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGL+NMC GEKRRLTIP+S GYGDRGAGAKIPGGATLVF+VELLGI + D GKEF Sbjct: 1 MLRRLFFLTLSAVVVLTASAKQGDGVDLDPNEKLRVGVKFRPDSCDIKSKKGDMLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLLNMCVGEKRRLTIPSSLGYGDRGAGAKIPGGATLVFEVELLGINNSDKGKEF 149
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_008876303.1 (hypothetical protein H310_11399 [Aphanomyces invadans] >ETV95130.1 hypothetical protein H310_11399 [Aphanomyces invadans]) HSP 1 Score: 189.9 bits (481), Expect = 8.300e-45 Identity = 93/133 (69.92%), Postives = 108/133 (81.20%), Query Frame = 0 Query: 74 ITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGI 207 I ++A +A+ A AK+ DL ++K+R+GVK+RPE C KS+ GDKLSMHYTGTL KDGSKFDSS+DRN PFEFTLG GQVI+GWD GLI MC GEKRRLTIP+ GYGDRG+ KIPGGATLVFDVELL I Sbjct: 4 IAVLACLAVAAFAKK----DLPADDKLRVGVKYRPEFCPRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGAGQVIRGWDQGLIGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLEI 132
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_009837431.1 (FK506-binding protein 2B [Aphanomyces astaci] >ETV73226.1 FK506-binding protein 2B [Aphanomyces astaci]) HSP 1 Score: 189.5 bits (480), Expect = 1.100e-44 Identity = 92/133 (69.17%), Postives = 106/133 (79.70%), Query Frame = 0 Query: 74 ITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGI 207 + +A +A+ A AK+ DL + K+R+GVKFRPE C KS+ GDKLSMHYTGTL KDGSKFDSS+DRN PFEFTLG GQVI+GWD GL+ MC GEKRRLTIP+ GYGDRG+ KIPGGATLVFDVELL I Sbjct: 4 VAALACLAVAAFAKE----DLAADAKLRVGVKFRPESCSRKSESGDKLSMHYTGTLRKDGSKFDSSVDRNSPFEFTLGSGQVIRGWDQGLLGMCIGEKRRLTIPSGLGYGDRGSPPKIPGGATLVFDVELLDI 132
BLAST of NO01G04340 vs. NCBI_GenBank
Match: OQR89893.1 (hypothetical protein THRCLA_12400 [Thraustotheca clavata]) HSP 1 Score: 188.0 bits (476), Expect = 3.200e-44 Identity = 93/135 (68.89%), Postives = 104/135 (77.04%), Query Frame = 0 Query: 75 TIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGITSP 210 + V L A A+A D DL P + +RIGVK+RPE CD KS+ GD LSMHYTGTL KDG+KFDSS DRNQPFEFTLG GQVIKGWD GL+ MC GEKRRLTIP+ GYGD G+ KIPG ATLVFDVELL I +P Sbjct: 3 SFVFLAAFVAAALVKD--DLPPTDPLRIGVKYRPEPCDRKSQSGDHLSMHYTGTLRKDGTKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCIGEKRRLTIPSGMGYGDHGSPPKIPGKATLVFDVELLEIKNP 135
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_009517606.1 (hypothetical protein PHYSODRAFT_353748 [Phytophthora sojae] >EGZ30331.1 hypothetical protein PHYSODRAFT_353748 [Phytophthora sojae]) HSP 1 Score: 186.8 bits (473), Expect = 7.000e-44 Identity = 90/132 (68.18%), Postives = 106/132 (80.30%), Query Frame = 0 Query: 75 TIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGI 207 T + + A+ A+ + DL P+ ++RIGVK+RPE+C KS+ GD LSMHYTGTL KDGSKFDSSLDRNQPFEF LG G+VIKGWD GL+NMC GEKRRLTIP++ GYGDRG+ KIPG ATLVFDVELL I Sbjct: 4 TAILVAAVMAAVQVQAKDDLPPDAQLRIGVKYRPEECPKKSQLGDVLSMHYTGTLRKDGSKFDSSLDRNQPFEFPLGAGRVIKGWDQGLVNMCVGEKRRLTIPSNMGYGDRGSPPKIPGKATLVFDVELLEI 135
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_012194420.1 (hypothetical protein SPRG_00814 [Saprolegnia parasitica CBS 223.65] >XP_012211242.1 hypothetical protein SPRG_16574 [Saprolegnia parasitica CBS 223.65] >KDO18050.1 hypothetical protein SPRG_16574 [Saprolegnia parasitica CBS 223.65] >KDO34753.1 hypothetical protein SPRG_00814 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 186.8 bits (473), Expect = 7.000e-44 Identity = 92/138 (66.67%), Postives = 104/138 (75.36%), Query Frame = 0 Query: 72 FFITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGITSP 210 F +A++A +AK+ DL P +RIGVK+RPE CD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MC GEKRRLTIP+ GYGD G+ IPG ATLVFDVELL I +P Sbjct: 3 FATCALAVLAALVAAKE----DLPPTAPLRIGVKYRPESCDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKNP 136
BLAST of NO01G04340 vs. NCBI_GenBank
Match: AIG56153.1 (secreted protein [Achlya hypogyna] >OQR98514.1 hypothetical protein ACHHYP_08440 [Achlya hypogyna]) HSP 1 Score: 186.0 bits (471), Expect = 1.200e-43 Identity = 91/138 (65.94%), Postives = 103/138 (74.64%), Query Frame = 0 Query: 72 FFITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGITSP 210 F ++A +AK+ DL P +RIGVK+RPE+CD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MC GEKRRLTIP+ GYGD G+ IPG ATLVFDVELL I +P Sbjct: 3 FAACLLAAAVAVVAAKE----DLPPTAPLRIGVKYRPEECDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAIKNP 136
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_008605223.1 (FK506-binding protein 2 [Saprolegnia diclina VS20] >EQC41509.1 FK506-binding protein 2 [Saprolegnia diclina VS20]) HSP 1 Score: 183.3 bits (464), Expect = 7.800e-43 Identity = 91/135 (67.41%), Postives = 102/135 (75.56%), Query Frame = 0 Query: 72 FFITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGI 207 F +A++A +AK+ DL P +RIGVK+RPE CD KS+ GD LSMHYTGTL KDGSKFDSS DRNQPFEFTLG GQVIKGWD GL+ MC GEKRRLTIP+ GYGD G+ IPG ATLVFDVELL I Sbjct: 3 FATCALAVLAALVAAKE----DLAPTAPLRIGVKYRPESCDRKSESGDHLSMHYTGTLRKDGSKFDSSRDRNQPFEFTLGSGQVIKGWDQGLVGMCVGEKRRLTIPSGMGYGDHGSPPTIPGKATLVFDVELLAI 133
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_024573534.1 (RxLR-like protein [Plasmopara halstedii] >CEG37165.1 RxLR-like protein [Plasmopara halstedii]) HSP 1 Score: 182.2 bits (461), Expect = 1.700e-42 Identity = 89/137 (64.96%), Postives = 102/137 (74.45%), Query Frame = 0 Query: 74 ITIVALVALTASAKQGDGVDLDPEEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGITSPD 211 +T A+ A+ + G DL P+ ++RIGVK RP+ C VKS+ GD LSMHYTGTL KDGSKFDSSLDRN PFEF LG G VIKGWD GL++MC GEKRRLTIP+ GYGD G+ KIPG ATLVFDVELL I D Sbjct: 3 LTAFLAAAVMATMQVGAKEDLPPDAQLRIGVKHRPDSCTVKSQPGDTLSMHYTGTLRKDGSKFDSSLDRNVPFEFKLGAGHVIKGWDRGLVDMCIGEKRRLTIPSDLGYGDHGSPPKIPGKATLVFDVELLDIKHED 139
BLAST of NO01G04340 vs. NCBI_GenBank
Match: XP_007405122.1 (hypothetical protein MELLADRAFT_123912 [Melampsora larici-populina 98AG31] >EGG11487.1 hypothetical protein MELLADRAFT_123912 [Melampsora larici-populina 98AG31]) HSP 1 Score: 181.8 bits (460), Expect = 2.300e-42 Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = 0 Query: 97 EEKVRIGVKFRPEKCDVKSKKGDKLSMHYTGTLYKDGSKFDSSLDRNQPFEFTLGQGQVIKGWDNGLINMCPGEKRRLTIPASHGYGDRGAGAKIPGGATLVFDVELLGI---TSPD-SGKE 215 ++K++IGV +P +C +K++KGDKLSMHYTGTL KDGSKFDSSLDRNQPF+FTLG GQVI GWD GL++MC GEKR+L IP S GYGDRGAG IPGGATLVF+VELLGI +PD SGK+ Sbjct: 27 DDKLQIGVTHKPTECPIKTQKGDKLSMHYTGTLQKDGSKFDSSLDRNQPFDFTLGAGQVIAGWDQGLLDMCIGEKRKLRIPPSMGYGDRGAGGVIPGGATLVFEVELLGILNRKAPDESGKK 148 The following BLAST results are available for this feature:
BLAST of NO01G04340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04340 ID=NO01G04340|Name=NO01G04340|organism=Nannochloropsis oceanica|type=gene|length=3161bpback to top protein sequence of NO01G04340.1 >NO01G04340.1-protein ID=NO01G04340.1-protein|Name=NO01G04340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=216bpback to top Synonyms
Publications
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