NO01G04290, NO01G04290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04290 vs. NCBI_GenBank
Match: XP_005854234.1 (bromodomain containing protein [Nannochloropsis gaditana CCMP526] >EKU22125.1 bromodomain containing protein [Nannochloropsis gaditana CCMP526] >EWM29357.1 bromodomain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 363.2 bits (931), Expect = 7.100e-97 Identity = 173/190 (91.05%), Postives = 184/190 (96.84%), Query Frame = 0 Query: 34 MADGGLSKMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPEDENQPPSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSLPE 224 MADGGLSKMYQLVQWLSNQKDVDAFL+PVDWKTLGLTDYPLVI+ PMDLGTIKGRLESGHY+KHAQVAEDVRLVWNNCK YNQEGSYLYKIA+KLAGKFEEKY KIKTEEP+GPEDENQPPSLEDKRQFR NMY+ITSDQLGEIVQTLEQQC EA+AKVG +DEIEINIDK+APRTFHFLANL+KNSLP+ Sbjct: 1 MADGGLSKMYQLVQWLSNQKDVDAFLEPVDWKTLGLTDYPLVISTPMDLGTIKGRLESGHYTKHAQVAEDVRLVWNNCKTYNQEGSYLYKIADKLAGKFEEKYSKIKTEEPDGPEDENQPPSLEDKRQFRENMYRITSDQLGEIVQTLEQQCPEAIAKVGNQDEIEINIDKVAPRTFHFLANLIKNSLPD 190
BLAST of NO01G04290 vs. NCBI_GenBank
Match: EJK74909.1 (hypothetical protein THAOC_03385, partial [Thalassiosira oceanica]) HSP 1 Score: 151.4 bits (381), Expect = 4.200e-33 Identity = 71/167 (42.51%), Postives = 100/167 (59.88%), Query Frame = 0 Query: 56 DAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPEDEN---QPPSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKN 220 + F + VDWKTLGL DYP +I HPMDLGT+K ++ G Y + +DVR +W NC YN +GS Y +AE +A KFE+K+ K+ + E P++E+KR F ++YKI D LG++V LE +C AL K +DE+EIN+D+I F L V + Sbjct: 91 EPFREAVDWKTLGLFDYPQIIKHPMDLGTVKRKINEGKYKSLHEAGDDVRQIWKNCMTYNADGSDFYNLAESMAKKFEDKFQKLLAQNDVATSQEGGVLDEPTIEEKRAFAKSLYKIEKDDLGKVVLDLENKCPAALLKNSAEDEVEINVDEITAAVFKELVEFVNS 257
BLAST of NO01G04290 vs. NCBI_GenBank
Match: GAX25343.1 (hypothetical protein FisN_5Lh436 [Fistulifera solaris]) HSP 1 Score: 149.8 bits (377), Expect = 1.200e-32 Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 0 Query: 31 LSTMADGGLSKMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRL-ESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYV------KIKTEEPEGPEDENQPPSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNS 221 +S ++ ++ +LV N+ + + F PVDWK GLTDYP +I HPMDLGTIK RL + HY QV EDVRLVW NC YN +GS Y +A+ L K++++Y ++ P ED SL+D+R F ++++I+ + LG ++ LEQ+C +AL + +DE+EIN+D I + L L+ N+ Sbjct: 1 MSAPSEEDWNRTMKLVDSFYNRPEAEPFRVPVDWKAYGLTDYPHIIKHPMDLGTIKTRLKKKDHYQTLYQVNEDVRLVWRNCMTYNADGSDFYTLAKDLQEKWDKQYTALLKDCRMAAPAPPSKEDTTGKLSLQDRRNFAKSLFQISKEDLGRVLVELEQKCPQALKRNATEDEVEINVDNITAKVVEELNPLINNA 197
BLAST of NO01G04290 vs. NCBI_GenBank
Match: GAX17051.1 (hypothetical protein FisN_5Hh436 [Fistulifera solaris]) HSP 1 Score: 149.4 bits (376), Expect = 1.600e-32 Identity = 77/197 (39.09%), Postives = 115/197 (58.38%), Query Frame = 0 Query: 31 LSTMADGGLSKMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRL-ESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYV------KIKTEEPEGPEDENQPPSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNS 221 +S + ++ +LV N+ + + F PVDWK GLTDYP +I HPMDLGTIK RL + HY QV EDVRLVW NC YN +GS Y +A+ L K++++Y ++ P ED SL+D+R F ++++I+ + LG ++ LEQ+C +AL + +DE+EIN+D I + L L+ N+ Sbjct: 1 MSAPTEEDWNRTMKLVDSFYNRPEAEPFRVPVDWKAYGLTDYPHIIKHPMDLGTIKTRLKKKDHYQTLYQVNEDVRLVWRNCMTYNADGSDFYTLAKDLQEKWDKQYTALLKDCRVAAPAPPSKEDTAGKLSLQDRRNFAKSLFQISKEDLGRVLVELEQKCPQALKRNATEDEVEINVDNITAKVVEDLNPLINNA 197
BLAST of NO01G04290 vs. NCBI_GenBank
Match: CBJ30746.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.7 bits (369), Expect = 1.000e-31 Identity = 73/199 (36.68%), Postives = 125/199 (62.81%), Query Frame = 0 Query: 31 LSTMADGGLSKMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPE---GPEDENQP-----PSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSL 222 +S+ GL ++ ++V N+ + AF +PV+ K +G+ DYP ++ +PMDLGT++ +LE G Y + VA DVRL+W+NC YN GS +A LA KFEE++ ++KT E E P +++P P+L++K +F ++Y+ T +G++++ ++ +C +AL K DE+E+N+D + P TF F+ L++ SL Sbjct: 1 MSSGDSNGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYERAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSEPVNTKAPTLDEKVRFTYDLYRTTKVDVGQVMEQVDARCPQAL-KSPADDEVELNVDMLDPLTFRFVERLLRQSL 198
BLAST of NO01G04290 vs. NCBI_GenBank
Match: GAX99294.1 (Hypothetical protein PINS_007157 [Pythium insidiosum]) HSP 1 Score: 144.8 bits (364), Expect = 3.900e-31 Identity = 75/183 (40.98%), Postives = 109/183 (59.56%), Query Frame = 0 Query: 41 KMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPEDENQPPSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSLPE 224 K L+++ + F + V+W+ GL DY V+ PMDLGTI+ +L Y K A+ A DVRLVW+NCK YNQ+GS LY +A+ L+ KFE+K +K + + P++E+K F N+YK+ LG +V+ LE+QC +AL K DE++I ID I +TF L LV+ +PE Sbjct: 8 KCSDLLEYFIRLDSTEPFRERVNWEEWGLYDYLQVVKVPMDLGTIRNKLSKNEYKKAAEFARDVRLVWDNCKLYNQDGSDLYLLADDLSKKFEDKVKSMKLDVGPRADRSIPAPTIEEKLAFSQNIYKLAGKDLGLVVEILEEQCPKALDK-SSPDEVDIVIDSIDNKTFRELLKLVQEKVPE 189
BLAST of NO01G04290 vs. NCBI_GenBank
Match: XP_009515896.1 (hypothetical protein PHYSODRAFT_537316 [Phytophthora sojae] >EGZ28621.1 hypothetical protein PHYSODRAFT_537316 [Phytophthora sojae]) HSP 1 Score: 144.1 bits (362), Expect = 6.700e-31 Identity = 78/185 (42.16%), Postives = 113/185 (61.08%), Query Frame = 0 Query: 41 KMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPE-DENQP-PSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSLPE 224 K +V+ + + F + V+W+ GL DY V+ PMDLGTI+ +L Y K A+ A D+RLVW+NCK YNQ+GS LY +A++LA KFE++ +K + P+ D++ P PSLE+K F N+YK+ LG IV+ LE+QC +AL K DE++I +D I +TF L V +PE Sbjct: 8 KCTDVVEHFFKLESCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLGKNEYKKPAEFARDMRLVWDNCKLYNQDGSDLYLLADELAKKFEDRVKAMKLDVGPVPKADKSIPAPSLEEKIYFSQNIYKVAPKDLGSIVELLEEQCPKALDK-SSPDEVDIVVDNIDNKTFRDLEKFVMEKVPE 191
BLAST of NO01G04290 vs. NCBI_GenBank
Match: XP_008907613.1 (hypothetical protein PPTG_13590 [Phytophthora parasitica INRA-310] >XP_008907614.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETI43511.1 hypothetical protein F443_11533 [Phytophthora parasitica P1569] >ETI43512.1 hypothetical protein, variant [Phytophthora parasitica P1569] >ETK83651.1 hypothetical protein L915_11226 [Phytophthora parasitica] >ETK83652.1 hypothetical protein, variant [Phytophthora parasitica] >ETL37068.1 hypothetical protein L916_11123 [Phytophthora parasitica] >ETL37069.1 hypothetical protein, variant [Phytophthora parasitica] >ETL90212.1 hypothetical protein L917_11027 [Phytophthora parasitica] >ETL90213.1 hypothetical protein, variant [Phytophthora parasitica] >ETM43533.1 hypothetical protein L914_11056 [Phytophthora parasitica] >ETM43534.1 hypothetical protein, variant [Phytophthora parasitica] >ETN07237.1 hypothetical protein PPTG_13590 [Phytophthora parasitica INRA-310] >ETN07238.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETO72249.1 hypothetical protein F444_11604 [Phytophthora parasitica P1976] >ETO72250.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP13402.1 hypothetical protein F441_11453 [Phytophthora parasitica CJ01A1] >ETP13403.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP41468.1 hypothetical protein F442_11427 [Phytophthora parasitica P10297] >ETP41469.1 hypothetical protein, variant [Phytophthora parasitica P10297] >KUF64622.1 Transcription factor GTE5 [Phytophthora nicotianae]) HSP 1 Score: 143.7 bits (361), Expect = 8.800e-31 Identity = 79/185 (42.70%), Postives = 112/185 (60.54%), Query Frame = 0 Query: 41 KMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPE-DENQP-PSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSLPE 224 K +V+ + F + V+W+ GL DY V+ PMDLGTI+ +L Y K A+ A D+RLVW+NCK YNQ+GS LY +A++LA KFE++ +K + P+ D++ P PSLE+K F N+YK+ LG IVQ LE+QC +AL K DE++I +D I +TF L V +PE Sbjct: 8 KCTDVVEHFFKLDSCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLSKNEYKKPAEFARDMRLVWSNCKLYNQDGSDLYLLADELAKKFEDRVKTMKLDVGPVPKADKSIPAPSLEEKIYFSQNIYKVNPKDLGAIVQLLEEQCPKALDK-SSPDELDIVVDHIDNKTFRDLEKFVLEKVPE 191
BLAST of NO01G04290 vs. NCBI_GenBank
Match: KUF99961.1 (Cyclic AMP-dependent protein kinase protein catalytic subunit [Phytophthora nicotianae]) HSP 1 Score: 143.7 bits (361), Expect = 8.800e-31 Identity = 79/185 (42.70%), Postives = 112/185 (60.54%), Query Frame = 0 Query: 41 KMYQLVQWLSNQKDVDAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPE-DENQP-PSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSLPE 224 K +V+ + F + V+W+ GL DY V+ PMDLGTI+ +L Y K A+ A D+RLVW+NCK YNQ+GS LY +A++LA KFE++ +K + P+ D++ P PSLE+K F N+YK+ LG IVQ LE+QC +AL K DE++I +D I +TF L V +PE Sbjct: 8 KCTDVVEHFFKLDSCEPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLSKNEYKKPAEFARDMRLVWSNCKLYNQDGSDLYLLADELAKKFEDRVKTMKLDVGPVPKADKSIPAPSLEEKIYFSQNIYKVNPKDLGAIVQLLEEQCPKALDK-SSPDELDIVVDHIDNKTFRDLEKFVLEKVPE 191
BLAST of NO01G04290 vs. NCBI_GenBank
Match: XP_024582181.1 (Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins [Plasmopara halstedii] >CEG45812.1 Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins [Plasmopara halstedii]) HSP 1 Score: 143.3 bits (360), Expect = 1.100e-30 Identity = 79/170 (46.47%), Postives = 109/170 (64.12%), Query Frame = 0 Query: 56 DAFLDPVDWKTLGLTDYPLVIAHPMDLGTIKGRLESGHYSKHAQVAEDVRLVWNNCKAYNQEGSYLYKIAEKLAGKFEEKYVKIKTEEPEGPE-DENQP-PSLEDKRQFRANMYKITSDQLGEIVQTLEQQCQEALAKVGGKDEIEINIDKIAPRTFHFLANLVKNSLPE 224 + F + V+W+ GL DY V+ PMDLGTI+ +L Y K A+ A D+RLVW+NCK YNQ+GS LY +A++LA KFE++ +K + P+ D++ P PSLEDK F N+YKI LG IV+ LE+QC +AL K DE++I ID I +TF L +V +PE Sbjct: 36 EPFRERVNWEEWGLYDYLQVVKEPMDLGTIRSKLAKNEYKKPAEFARDMRLVWSNCKLYNQDGSDLYLLADELAKKFEDRVKAMKLDVGPVPKADKSIPAPSLEDKICFSQNIYKINPKDLGVIVKLLEEQCPKALDK-SSPDELDIVIDNIDNKTFRDLEKIVLEKVPE 204 The following BLAST results are available for this feature:
BLAST of NO01G04290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04290 ID=NO01G04290|Name=NO01G04290|organism=Nannochloropsis oceanica|type=gene|length=1276bpback to top protein sequence of NO01G04290.1 >NO01G04290.1-protein ID=NO01G04290.1-protein|Name=NO01G04290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bpback to top Synonyms
Publications
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