NO01G04260, NO01G04260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04260 vs. NCBI_GenBank
Match: SCV70310.1 (BQ2448_1704 [Microbotryum intermedium]) HSP 1 Score: 134.4 bits (337), Expect = 6.300e-28 Identity = 76/196 (38.78%), Postives = 121/196 (61.73%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPP-VLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMY 314 +S +G I+ G ++ K+PQ +I +SA GLS S Y+L+T A+ +A+++RN+FP+STYGE VF+L QNV+I+ + LYS +P P +L LS L L + L+ +P+ +S+L S SIPL S++PQ+L N + +STG+L+ + Q G LAR+FTT + + + V+ L N + Q ++Y Sbjct: 47 ISKALGLAIVLGGIIVKLPQIIKIINARSARGLSLSSYLLDTASTAIVVAYNVRNSFPWSTYGENVFLLAQNVVIIGLVVLYSAEPTAPLILLLSALGLMLAYVLSSPDLLPLPHLSLLLSASIPLTLSSKVPQILENQKNRSTGQLSGFLVASQVLGCLARVFTTLTETGDRVLWWGFVMTTLMNAIIAVQMWVY 242
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_001877003.1 (predicted protein [Laccaria bicolor S238N-H82] >EDR12739.1 predicted protein [Laccaria bicolor S238N-H82]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 82/210 (39.05%), Postives = 123/210 (58.57%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPA---VPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQPPVRPSKEV 326 LS +G I+ G + KVPQ I +SA GLS S Y+LET+ A++LA+S RN FPFSTYGE +F+ +QN ++ I Y+ +A ++F + + A +P +S+LQ ++PL FS++PQ+ N RT+STG+L+ +I Q AG LAR+FTT +V + + +A+L N L AQ +MY G+ V S E+ Sbjct: 44 LSKGLGIGIVVGGSVMKVPQILLIINARSARGLSFSSYILETLSYAITLAYSFRNEFPFSTYGENLFLTIQNTVVTLLILAYAPSSLRSGNKAQKIAVAIFATIATAFALYVIPSQTLSLLQMSTLPLSLFSKLPQIRQNARTQSTGQLSAVAVIAQVAGCLARLFTTATEVGDAIVSAGFALALLLNIVLGAQLYMYWGKSDVTESHEL 253
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_007870565.1 (mannose-P-dolichol utilization defect 1 protein [Gloeophyllum trabeum ATCC 11539] >EPQ51137.1 mannose-P-dolichol utilization defect 1 protein [Gloeophyllum trabeum ATCC 11539]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYS----NQPRPPVLYLSLLAASLFFALT--ISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMY 314 +S +G I+ G + KVPQ I +SA GLS YVLET+ A++LA+S RNAFPFSTYGE +F+ QNV+I I Y+ NQ +P L L ASL ALT +P ++++LQ ++PL FS++PQ++ N+R +STG+L+ ++ Q G LAR+FTT +V + L + +A+L NG L AQ ++Y Sbjct: 44 VSKGLGIGIVVGGSIMKVPQLLLILSARSARGLSLPAYVLETLAYAITLAYSFRNAFPFSTYGENLFLTAQNVLITLLIIYYAPARPNQSKP----LQLTVASLASALTGVALYTLPTDILALLQLSTLPLSLFSKLPQIMQNYRAQSTGQLSAFAVLSQIVGCLARLFTTATEVGDPLVIAGFALALLLNGVLGAQLWIY 240
BLAST of NO01G04260 vs. NCBI_GenBank
Match: KIJ93572.1 (hypothetical protein K443DRAFT_395672 [Laccaria amethystina LaAM-08-1]) HSP 1 Score: 132.9 bits (333), Expect = 1.800e-27 Identity = 84/213 (39.44%), Postives = 123/213 (57.75%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGI------SLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQPPVRPSKEV 326 LS +G I+ G + KVPQ I +SA GLS S YVLET+ A++LA+S RN FPFSTYGE +F+ +QN ++ I SL S+ + + FAL + P+ P+ S+LQ ++PL FS++PQ+ N R++STG+L+ ++ Q AG LAR+FTT +V + L +A+L N L AQ +MY G+ S E+ Sbjct: 44 LSKVLGIGIVVGGSVMKVPQILLITNARSARGLSFSSYVLETLSYAITLAYSFRNQFPFSTYGENLFLTIQNTVVTLLILAYAPSSLRSDNRAQKITVAIFATIATAFALYVIPSQPL---SLLQMSTLPLSLFSKLPQIRQNARSQSTGQLSAVAVVAQVAGCLARLFTTATEVGDALVSAGFALALLLNIVLGAQLYMYWGESDATESYEL 253
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_024336880.1 (hypothetical protein POSPLADRAFT_1183810 [Postia placenta MAD-698-R-SB12] >OSX60086.1 hypothetical protein POSPLADRAFT_1183810 [Postia placenta MAD-698-R-SB12]) HSP 1 Score: 132.5 bits (332), Expect = 2.400e-27 Identity = 86/202 (42.57%), Postives = 118/202 (58.42%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPP----VLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQ 317 +S +G I+ G + KVPQ I +SA GLS S Y LET+ A++LA+S R FPFSTYGE +F+ QNVII I+ YS+ PR V ++ A FAL +P P+ ++LQ ++PL FS+IPQ+ NHR STG+L+ +I Q G LAR+FTT +V + L +A+L N L Q +MY GQ Sbjct: 44 ISKGLGVGIVVGGSIMKVPQLLLIVSARSARGLSLSAYSLETLAYAITLAYSYRKDFPFSTYGENLFLTFQNVIITLLITYYSSHPRSAAIRRVAAATVPMALSAFALVAAPDAPL---ALLQLATLPLSLFSKIPQIRQNHRAHSTGQLSAFAVIAQIGGCLARLFTTATEVGDPLVSAGFALALLLNCVLGVQMWMYWGQ 242
BLAST of NO01G04260 vs. NCBI_GenBank
Match: PBK63167.1 (mannose-P-dolichol utilization defect 1 protein [Armillaria solidipes]) HSP 1 Score: 131.7 bits (330), Expect = 4.100e-27 Identity = 77/197 (39.09%), Postives = 121/197 (61.42%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRG 316 LS +G I+ G + KVPQ + + +SA GLS YVLET+ ++L +S+RN FPFSTYGE +F+ +QN +I I YS P+ +L++A L ++ +P ++S LQ ++PL F++IPQ+ N+++KSTG+L+ +I Q G +AR+FTT +V + + L +A++ NG L AQ +MY G Sbjct: 44 LSKGVGLGIVVGGSIVKVPQIILVVKSRSAQGLSLGTYVLETLSYCITLLYSLRNDFPFSTYGENLFLTIQNALITQLIVFYSPNPQGKT---TLISAGLTAFISTLYYLPTEILSYLQIATLPLSLFAKIPQITQNYQSKSTGQLSAFAVIAQILGCIARLFTTMQEVGDPVVLAGFALALVLNGVLGAQLWMYWG 237
BLAST of NO01G04260 vs. NCBI_GenBank
Match: EGU11794.1 (MPU1p [Rhodotorula toruloides ATCC 204091]) HSP 1 Score: 131.0 bits (328), Expect = 6.900e-27 Identity = 75/196 (38.27%), Postives = 121/196 (61.73%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLY-LSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMY 314 LS +G ++AG + K+PQ + R+ SA GLS S YVL+TV +++A+++RN FP+ST+GE F+L QN +++ I+ YS +P P L L +L + L +AL+ + VP +S LQ+++IP+ S++PQ+L N R +STG+L+ + AG LAR+FTT + + L ++ L NG + Q +Y Sbjct: 55 LSKGLGLAMVAGGAILKLPQIITVVRRGSARGLSLSSYVLDTVATGITVAYNVRNGFPYSTWGEMAFLLAQNAVLIVLITSYSARPTLPRLAPLVVLFSKLAYALSNTSLVPSSTLSFLQTLTIPISLSSKVPQILSNFRNRSTGQLSAFLVFNSLAGCLARVFTTRTETNDPLLFWGFLLGALLNGVIAIQMLVY 250
BLAST of NO01G04260 vs. NCBI_GenBank
Match: PAV17226.1 (mannose-P-dolichol utilization defect 1 [Phellinus noxius]) HSP 1 Score: 131.0 bits (328), Expect = 6.900e-27 Identity = 85/203 (41.87%), Postives = 118/203 (58.13%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISP-----AVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQ 317 LS +G I+ G + KVPQ I R +SA GLS + YVLET+ A++LA+S RN FPFSTYGE F+ LQN I I+ Y ++ +A F TI+ AVP ++ LQ ++PL FS++PQ+ N+R +STG L+ +I Q G LAR+FTT +V + L L V+A++ N L AQ +MY GQ Sbjct: 44 LSKGLGLGIVLGGSIMKVPQVFIILRARSARGLSFAAYVLETLAYAITLAYSYRNGFPFSTYGENFFLTLQNAFITVLIAYYPASGLRRARGGNITSAIGTFFATIAGAFALYAVPSSTLAFLQLSTLPLSVFSKLPQITTNYRAQSTGNLSAFAVISQVLGCLARVFTTLTEVDDVLLLTGFVLALVLNCVLAAQMWMYWGQ 246
BLAST of NO01G04260 vs. NCBI_GenBank
Match: PBK80850.1 (mannose-P-dolichol utilization defect 1 protein [Armillaria gallica]) HSP 1 Score: 131.0 bits (328), Expect = 6.900e-27 Identity = 76/197 (38.58%), Postives = 121/197 (61.42%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRG 316 LS +G I+ G + KVPQ + + +SA GLS YVLET+ ++L +S+RN FPFSTYGE +F+ +QN +I I YS P+ + +L++A L ++ +P ++S LQ ++PL F++IPQ+ N+++KSTG+L+ +I Q G +AR+FTT +V + + L +A++ N L AQ +MY G Sbjct: 44 LSKGVGLGIVVGGSIVKVPQIILVVKSRSAQGLSLGTYVLETLSYCITLLYSLRNDFPFSTYGENLFLTIQNALITQLIVFYSPNPQGKI---TLISAGLTAFISTLYYLPTEILSYLQIATLPLSLFAKIPQITQNYQSKSTGQLSAFAVIAQVLGCIARLFTTMQEVGDPVVLAGFALALVLNSVLGAQLWMYWG 237
BLAST of NO01G04260 vs. NCBI_GenBank
Match: PRQ75971.1 (hypothetical protein AAT19DRAFT_12993 [Rhodotorula toruloides]) HSP 1 Score: 131.0 bits (328), Expect = 6.900e-27 Identity = 75/196 (38.27%), Postives = 121/196 (61.73%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLY-LSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMY 314 LS +G ++AG + K+PQ + R+ SA GLS S YVL+TV +++A+++RN FP+ST+GE F+L QN +++ I+ YS +P P L L +L + L +AL+ + VP +S LQ+++IP+ S++PQ+L N R +STG+L+ + AG LAR+FTT + + L ++ L NG + Q +Y Sbjct: 55 LSKGLGLAMVAGGAILKLPQIITVVRRGSARGLSLSSYVLDTVATGITVAYNVRNGFPYSTWGEMAFLLAQNAVLIVLITSYSARPTLPRLAPLVVLFSKLAYALSNTSLVPSSTLSFLQTLTIPISLSSKVPQILSNFRNRSTGQLSAFLVFNSLAGCLARVFTTRTETNDPLLFWGFLLGALLNGVIAIQMLVY 250 The following BLAST results are available for this feature:
BLAST of NO01G04260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04260 ID=NO01G04260|Name=NO01G04260|organism=Nannochloropsis oceanica|type=gene|length=981bpback to top protein sequence of NO01G04260.1 >NO01G04260.1-protein ID=NO01G04260.1-protein|Name=NO01G04260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
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