NO01G04260, NO01G04260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04260 vs. NCBI_GenBank
Match: EWM29377.1 (Cystinosin/ERS1p repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 323.9 bits (829), Expect = 5.600e-85 Identity = 196/324 (60.49%), Postives = 233/324 (71.91%), Query Frame = 0 Query: 1 MARILAGPFSLACVVVALAASSTTRAFAVGQSKNLMASAHATARSQIKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPSA----SILLPFLRQRGGAGSTSISASPTKVGGLDTLTLLSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQPPVR 321 MARI F LA +VALA SSTTRAFA G ++ H R + KT S +A S ++P L +RGG +I A+P K G D LTLLS GY +IAGSMLFK+PQAARIFRKKSA+GLSSSMY+LET+GIAMSLAFSIRNAFPFSTYGE VFI+LQNV+IM+GISLYS++P PP+L LSLL ASLFFA TISP PM++VSILQ++SIPLLNFSR+PQLLLN+R KSTGELAPSTLILQA GN+ARIFTT VQ+QN L+LLSCV A +FNGALVAQ+++YR + ++ Sbjct: 56 MARI----FGLA--LVALAVSSTTRAFATGPQNVFKSTIHGGLRPR-KTPMLASLCSAPHHHVLNVGKGMPVSNRPLPSSSLAAAPSSISSIVPILFRRGG---VAIPAAPGK--GFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRASMK 367
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_005855133.1 (mannose-p-dolichol utilization defect 1 [Nannochloropsis gaditana CCMP526] >EKU21232.1 mannose-p-dolichol utilization defect 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 321.6 bits (823), Expect = 2.800e-84 Identity = 172/237 (72.57%), Postives = 203/237 (85.65%), Query Frame = 0 Query: 84 SASILLPFLRQRGGAGSTSISASPTKVGGLDTLTLLSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQPPVR 321 S S + P L +RGG +I A+P K G D LTLLS GY +IAGSMLFK+PQAARIFRKKSA+GLSSSMY+LET+GIAMSLAFSIRNAFPFSTYGE VFI+LQNV+IM+GISLYS++P PP+L LSLL ASLFFA TISP PM++VSILQ++SIPLLNFSR+PQLLLN+R KSTGELAPSTLILQA GN+ARIFTT VQ+QN L+LLSCV A +FNGALVAQ+++YR + P++ Sbjct: 19 SISSIAPILFRRGG---VAIPAAPGK--GFDFLTLLSRTTGYVVIAGSMLFKLPQAARIFRKKSAAGLSSSMYILETIGIAMSLAFSIRNAFPFSTYGETVFIVLQNVVIMAGISLYSDEPSPPILALSLLLASLFFAYTISPLAPMLLVSILQTVSIPLLNFSRVPQLLLNYRNKSTGELAPSTLILQAVGNVARIFTTMVQLQNTLYLLSCVAAFIFNGALVAQYYLYRDRAPMK 250
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_005538404.1 (similar to mannose-P-dolichol utilization defect 1 protein [Cyanidioschyzon merolae strain 10D] >BAM82368.1 similar to mannose-P-dolichol utilization defect 1 protein [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 162.9 bits (411), Expect = 1.600e-36 Identity = 92/200 (46.00%), Postives = 137/200 (68.50%), Query Frame = 0 Query: 116 LTLLSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAV-PMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNL-FLLSCVVAMLFNGALVAQFFMY 314 L LLS +G+ +I GS L+KVPQ RI R +SA G+S + YV ETV A S +++R FPF T+GE+ FIL+QNV+I+ +S + +PR L + +L + +SP + P VVV++ Q++SIPLLN SRIPQ+++N + ++TGEL+ +T++LQ GN AR+FTT V++ NL +LLS +VA+ N LV Q+F + Sbjct: 96 LGLLSQVLGWLVIIGSSLYKVPQVVRILRVRSAKGISVTTYVCETVSTACSFCYALRQRFPFDTFGESGFILIQNVMILVLMSHFDARPRRWATLAILGSITLLMGVLLSPRLAPPVVVTVAQAVSIPLLNLSRIPQIVMNAQLRTTGELSITTMLLQLLGNAARLFTTLVRLDGNLPYLLSAIVALALNSILVYQYFRF 295
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_005706905.1 (lysosomal cysteine transporter, LCT family [Galdieria sulphuraria] >EME30385.1 lysosomal cysteine transporter, LCT family [Galdieria sulphuraria]) HSP 1 Score: 147.9 bits (372), Expect = 5.500e-32 Identity = 91/234 (38.89%), Postives = 137/234 (58.55%), Query Frame = 0 Query: 81 STPSASILLPFLRQRGGAGSTSISASPTKVGGLDTLTLLSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYR 315 STP+ + ++++ +SIS V + L S+ +GY +I S +KVPQ ARI KKS+ G+S SMYVLE++GI SL + I+ FP+ T+ E++ I +QN+II + Y+ + L L A + +P+ + +LQ S PL+N S+IPQ+L N R +STGEL+P TL Q AGN+AR+FTT VQ++N FL S ++++ N L Q+ YR Sbjct: 25 STPATYKCINKVKKQSTCQQSSISLPSPDVVRCNHLKSTSSLIGYVVIFCSTFYKVPQIARIITKKSSKGISLSMYVLESIGIYFSLCYCIQAKFPWETFAESICIFVQNIIITLFLYKYTERKDGRNRNLVYALIPLMGASLLCIRLPIHWLQLLQVCSSPLMNISKIPQILRNERNQSTGELSPITLSFQLAGNVARVFTTIVQLRNRWFLTSISISLILNAILGLQYIRYR 258
BLAST of NO01G04260 vs. NCBI_GenBank
Match: POY76354.1 (hypothetical protein BMF94_0551 [Rhodotorula taiwanensis]) HSP 1 Score: 141.4 bits (355), Expect = 5.100e-30 Identity = 79/200 (39.50%), Postives = 128/200 (64.00%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPR-PPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQP 318 LS +G ++AG + K+PQ + R KSA GLS S YVL+TV ++++A++IRN FPFSTYGE F+L QN +++ I+ YS +P P ++ L + +SL +AL+ + +S LQ+++IP+ S++PQ+L N + KSTG+L+ ++ G LAR+FTT + ++ L L + ++ L NG ++AQ +Y G P Sbjct: 55 LSKALGLGMVAGGAILKLPQIMTVVRSKSARGLSLSSYVLDTVATSITVAYNIRNGFPFSTYGEMGFLLAQNAVLIVLITSYSARPTLPRLVPLVAVLSSLAYALSSPSLISASTLSFLQTLTIPISLSSKVPQILENQKNKSTGQLSTFLVVNSLGGCLARVFTTLSETKDALLLWTFALSALLNGVILAQIVLYGGNP 254
BLAST of NO01G04260 vs. NCBI_GenBank
Match: KWU45024.1 (mannose-P-dolichol utilization defect 1 protein, partial [Rhodotorula sp. JG-1b]) HSP 1 Score: 138.3 bits (347), Expect = 4.300e-29 Identity = 82/198 (41.41%), Postives = 125/198 (63.13%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETV--GIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPR-PPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMY 314 LS +G ++AG + K+PQ + R SA GLS S Y+L+TV GI S+A+++RN FPFSTYGE F+L QN +++ I+ YS +P P ++ L L SL +AL VP +S LQ+++IP+ S++PQ++ N++ KSTG+L+ +I AG LAR+FTT + ++ L L + +A L NG + AQ +Y Sbjct: 44 LSKVLGLGMVAGGAILKLPQILTVVRSGSARGLSLSSYILDTVATGITASVAYNVRNGFPFSTYGEMGFLLAQNAVLIVLITSYSARPTLPRLVPLVALLGSLAYALASPSLVPASTLSFLQTLTIPISLSSKVPQIVENYKAKSTGQLSAFLVINSLAGCLARVFTTMSETKDPLLLWNFALAALLNGVIFAQMIVY 241
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_018289466.1 (hypothetical protein PHYBLDRAFT_75231 [Phycomyces blakesleeanus NRRL 1555(-)] >OAD71426.1 hypothetical protein PHYBLDRAFT_75231 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 137.1 bits (344), Expect = 9.700e-29 Identity = 81/197 (41.12%), Postives = 121/197 (61.42%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRG 316 +S +G I+ G + K+PQ I R KSA GLS S Y+LET A++LA+++R PFST+GE FI LQN++I I LYS + V+ + L S+F+ LT VP ++++L + +IPL S++PQ+ N + KSTG+L+ T+I AG+ AR+FTT ++ + L L V+A + N LV Q F+Y G Sbjct: 39 ISKGLGLGIVLGGSIVKIPQIMTIVRNKSAQGLSLSSYLLETFSYAITLAYNLRQGNPFSTFGEIFFISLQNIVITLLILLYSGKREALVMTFTSL-ISIFYCLTSEKLVPASIMAVLYAATIPLSLASKVPQISANFKNKSTGQLSVFTVINYFAGSTARVFTTMTELDDPLMLTGTVLASVLNAVLVIQVFLYWG 234
BLAST of NO01G04260 vs. NCBI_GenBank
Match: XP_005539034.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM82998.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 134.8 bits (338), Expect = 4.800e-28 Identity = 82/208 (39.42%), Postives = 125/208 (60.10%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTI-----SPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQPPVRP 322 L+ +GY ++AG+ L K+PQ RI + +SA+G+S + Y++E+ G A +LA+ R +PFSTYG+ V + +QN +IM+ I ++NQ P L LL S + T+ AVP+ V+ L S+++ ++ SR+PQ+L N R K TG L+ +T + G AR+FTT QVQN+ L+ + + NG LVAQ MYR Q P Sbjct: 54 LARVLGYGVVAGAALVKLPQLLRILQNRSAAGISVATYLVESFGYAYNLAYHYRAGYPFSTYGDFVLLGVQNCLIMALIFYFNNQWFP----LGLLTLSSYITATVVASWSQRAVPLAVLERLCSLNLAIVIGSRLPQILANARRKHTGSLSLATCLGLFGGATARVFTTMQQVQNHTILVGYLASAFLNGILVAQILMYRKQTRTTP 257
BLAST of NO01G04260 vs. NCBI_GenBank
Match: EED78069.1 (predicted protein, partial [Postia placenta Mad-698-R]) HSP 1 Score: 134.8 bits (338), Expect = 4.800e-28 Identity = 91/225 (40.44%), Postives = 124/225 (55.11%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASL-----FFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQ------------PPVRPSKEVW 327 +S +G I+ G + KVPQ I +SA GLS S Y LET+ A++LA+S R FPFSTYGE +F+ QNVII I+ YS+ P P + AA++ FAL +P P+ ++LQ ++PL FS+IPQ+ NHR STG+L+ +I Q G LAR+FTT +V + L +A+L N L Q +MY GQ PV EVW Sbjct: 44 ISKGLGVGIVVGGSIMKVPQLLLIVSARSARGLSLSAYSLETLAYAITLAYSYRKEFPFSTYGENLFLTFQNVIITLLITYYSSHP-PSAAIRRVAAATVPMVLSAFALVAAPDAPL---ALLQLATLPLSLFSKIPQIRQNHRAHSTGQLSAFAVIAQIGGCLARLFTTATEVGDPLVSAGFALALLLNCVLGVQMWMYWGQDERDQSGKGRIGTPVEEKPEVW 264
BLAST of NO01G04260 vs. NCBI_GenBank
Match: SJL10554.1 (related to mannose-P-dolichol utilization defect 1 protein [Armillaria ostoyae]) HSP 1 Score: 134.8 bits (338), Expect = 4.800e-28 Identity = 79/207 (38.16%), Postives = 125/207 (60.39%), Query Frame = 0 Query: 119 LSTFMGYTIIAGSMLFKVPQAARIFRKKSASGLSSSMYVLETVGIAMSLAFSIRNAFPFSTYGEAVFILLQNVIIMSGISLYSNQPRPPVLYLSLLAASLFFALTISPAVPMVVVSILQSISIPLLNFSRIPQLLLNHRTKSTGELAPSTLILQAAGNLARIFTTFVQVQNNLFLLSCVVAMLFNGALVAQFFMYRGQPPVRPSKEV 326 LS +G I+ G + KVPQ + + +SA GLS YVLET+ ++L +S+RN FPFSTYGE +F+ +QN +I I YS P+ + +L++A L ++ +P ++S LQ ++PL F++IPQ+ N+++KSTG+L+ +I Q G +AR+FTT +V + + L +A++ NG L AQ +MY G +EV Sbjct: 44 LSKGVGLGIVVGGSIVKVPQIILVVKSRSAQGLSLGTYVLETLSYCITLLYSLRNDFPFSTYGENLFLTIQNALITQLIVFYSPNPQGKI---TLISAGLTAFISTLYYLPTEILSYLQIATLPLSLFAKIPQITQNYQSKSTGQLSAFAVIAQILGCIARLFTTMQEVGDPVVLAGFALALVLNGVLGAQLWMYWGTQAKTVEEEV 247 The following BLAST results are available for this feature:
BLAST of NO01G04260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04260 ID=NO01G04260|Name=NO01G04260|organism=Nannochloropsis oceanica|type=gene|length=981bpback to top protein sequence of NO01G04260.1 >NO01G04260.1-protein ID=NO01G04260.1-protein|Name=NO01G04260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=327bpback to top Synonyms
Publications
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