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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:1114481..1118407 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO01G04170 vs. NCBI_GenBank
Match: EWM29370.1 (hypothetical protein Naga_100028g38 [Nannochloropsis gaditana]) HSP 1 Score: 337.8 bits (865), Expect = 1.100e-88 Identity = 186/373 (49.87%), Postives = 224/373 (60.05%), Query Frame = 0
Query: 504 MMRFVPMETRQLIKKDFDNFSQGRPGFRAYAVQHRLSYELNAAPRRYRGKAGQGGLLGVKLWELEKFEWFDSLLKFLANEWWDVGVIMWCEEVGREEGGRERSRLEAYLREAGATIERRKAVLLSLMGSVHLRSYDWQEGVXXXXXXXXXXXXXXXXXXXXPRFGQMCMVINIHGQGEVVFRKRKE----------------------------------------------GGKK--------------------------EEVLRMPLKSGDVYCYTGEYRYGCEERVELDQELSPYRCFIAIRFWLPGREWLARVVRDEG--EGGG---FQGWRKLDKADKEREGRWGMEPGMVMVSPTYAGMARVMGEA 800
MMR+V METRQ IK+DFD+FSQGRP FR++A+QHRLSYELNAAPRR R K GGLLGV+L+ELE F WF LL FLA +WW+V VIM+CEEV REEG +ER RLEAYL+EAG ++ RR+AV+ SL+GSVHLRSYD E PR+G + MV+NIHG GEVVFR+ +E GG + VLR+PLKSGDVYCYTG+YRYGC ERVEL+ + SPYRCFIA RFW+PGREWL R+ + EG EGG F GWRKL+K DKER+ RWG + P+YAG++RV+ EA
Sbjct: 1 MMRYVAMETRQAIKRDFDDFSQGRPSFRSFAIQHRLSYELNAAPRRCRVKPLMGGLLGVRLYELESFAWFAPLLDFLAAQWWEVAVIMFCEEVRREEGAQERGRLEAYLKEAGKSLARRRAVMTSLIGSVHLRSYDQAE---------------TQVGRLGPRYGHLMMVLNIHGNGEVVFRRVREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGGLEAXXXXXXXXXXXXXXXXXXXXXXXXXXXVLRLPLKSGDVYCYTGKYRYGCAERVELNAKASPYRCFIAFRFWIPGREWLVRMSKAEGASEGGADGRFVGWRKLEKEDKERDTRWG-QGNKTAARPSYAGLSRVLSEA 357
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04170 ID=NO01G04170|Name=NO01G04170|organism=Nannochloropsis oceanica|type=gene|length=3927bp
AAATCACCAGCGTAGACTTCTCAAGGCAACCTGGAATGTCAGAGGAGGAT
ATCCCAATAGCCAGCAACCCGTCATCTACCACCAAAGGTGGGCAAGGACA
AGACAAAGCAAAGAAAGGACTTCATCATCAGAAAAGCCACGTGAATTCGC
AGGCCGCCACTCCCACCTCGCCACCGCAAGAAGGACCGGCCGGCGGAAGT
GTAGAGCACAAGCGCACATCGACAGGGAAAGCTCCTCCGCGCAAGTCGAG
CTCCACCAACAAgtgagtacgagtgggatcgagagaaagaaggaaagaaa
ggaagaagatgcctccgatgacgccgccttttgtcacgccccctttcgta
tgcatgcatgatggcgcgtgggatgacttgcgtcctctcatggtggttgt
acgatatgagtgtttccataaaggagtgtggatggacgaatagtccgtgc
gagccataacttcatatgcccttgttccctcataccagatgacgaatcaa
gacatttattcatatctctaaacctatgtctctccccccatcattccttt
cccttccgccagGTCCACGCCCTCCAGCGCCGACAACACCGCCGTCAGCG
CCTCGACAGAAGTCGTCGGAGACTTGGGCATCTCTTCTTCTTCCCCTTCC
ATGGAATACTCCCTCCCTACCGTCGGCCCTCCCAAGAAAGCGGGCAAAAG
CAAAGCCAAGAATAGTGCCGCCGCTGCCGCCGCTGCTGCTTCTGCTGCCG
CTACCGCTGCTCCTGCCGATGCTGACGCGCATCGGCATATGCCCGTGAAT
GGGACATTTGATGCCCCTCCTGTGGCATTTCCGGGTAGCCCCTCCATTAC
TAGTGCTCCTCCTCCCCCTCTTCCCTCCGGCCACCCTTCCGCAGGAGCAC
CGGCGAAAAAGAGCGGAGGCGGGAGTAAGAAAAACCTGGTGGGGCGCGAG
CATATCTGTCAGCACGATTCTCTGTGTAATGAACCCAGGACGACTAAGGA
CCGAGGGGGGGGAATGCATGTGTTCTGTGCCCGGCATAAGGAGGAGAAGC
AAAAGGCCTGGCGAGAAGCGGCGAAACGGTACAGGGAACGGAAACGGTTG
GAGGTATCCTGGGAGCAAGGCCAAGGGGAAGCACGACGGGGTGGTGGTGG
AGGAGGAGGAGCAGGAGGAGGGGCGTTGCCGCCTGAGTTCTTCCAGAAGG
GGGGAGGAGGGAGTGGTGAGGGGATAGGAGGCAAGCGAGGAGCAGCCGGG
GGGCATGTGAGCCATTATAAACCGCCCACTGCTATTGCTCAACCGCTGCG
GGAGCAGTTGCAATTGCAGCAGCAGCAGGAAACAGAGCAGCAGCATCATC
ATCATCATCATCAAGCGCAGCAGCATCCCCCGTTCGCTTTCCCCCCCCCT
CCGATGGCTCTGCCGCCCCCAGTGGTTGCCGGTGGTCCGCCTCCTCCTCA
GCCTCTCATCGCCAGCAGCCCCGAAGAACTTAGCAATGACACTCCTTCTT
CTGCTGCTGCTGCTCCTGCAGGCGGTGAAGGCGCTGCAGCTCTCACCTCT
GGCATTAAGCCTATGCTTCCTCATTCACACTCAGGTGACTCGATCAACGA
CTCGACCGGCGGTGGCGCTCCGCCCCCCCCCCTTCCCTCCCTTCCTACCC
TCGACCGTCCTTCCTCCCCGCGTGGCGATCGGACGTCTCATTCCACCTCG
TCCTCCTCGTCCTCCTCCTCTGCCACCTCAATCACCACTGGTACCACCCC
CTCCTCCCTCCCTTCCTCCCTCCCTCCTTACTCTCCCCCAGCGGGCATTT
CCCGCGCCATCGCTGCCTGGCCTTTGTTCTGGTATCAGAAGGAGATGATG
CGATTCGTCCCGATGGAAACCCGTCAGTTAATCAAGAAGGATTTCGACAA
TTTTTCGCAGGGGCGACCTGGCTTTCGCGCCTATGCCGTCCAGCACCGGT
TGAGCTATGAGCTGAACGCGGCGCCGAGGAGGTACCGGGGAAAGGCGGGA
CAAGGGGGTCTGCTGGGAGTAAAGCTTTGGGAGCTGGAGAAGTTTGAGTG
GTTTGACAGTCTGTTGAAGTTCTTGGCCAACGAGTGGTGGGATGTGGGGG
TGATCATGTGGTGTGAGGAGGTGGGGAGGGAGGAGGGGGGGAGGGAACGG
TCGAGGCTGGAGGCGTACTTAAGGGAGGCTGGAGCGACGATAGAGAGACG
AAAAGCAGTGCTGCTCAGCCTGATGGGTAGTGTGCACTTGAGGAGCTACG
ACTGGCAGGAAGGGGTTGAGGAGGGTGAGGAGGAGGGAGGGCAAGGAGGG
AGGGAAGGAGGGAAGGGAGGGGGAGGGCCACGATTTGGGCAGATGTGCAT
GGTGATCAATATCCATGGACAGGGAGAGGTGGTGTTTAGGAAGAGAAAGG
AAGGCGGAAAGAAGGAGGAGGTCTTGCGGATGCCGTTGAAGAGTGGTGAT
GTGTATTGCTATACGGGGGAGTACAGGTACGGGTGTGAAGAGCGGGTGGA
GCTAGATCAGGAATTGAGCCCTTACCGATGCTTCATTGCCATTCGATTTT
GGTTGCCGGGACGGGAGTGGCTTGCGCGGGTCGTGAGGGACGAGGGGGAG
GGAGGGGGATTTCAAGGGTGGAGGAAGCTGGACAAGGCGGACAAGGAGAG
GGAGGGGAGGTGGGGAATGGAGCCGGGGATGGTGATGGTCAGTCCCACCT
ATGCAGGTATGGCGCGGGTTATGGGGGAGGCGGATTCCGGGGCGGCGTGC
GGTGTGGCTGGAGGGGGAGGGAACGGAGTTGGAGGGGGAAAGAAGGGAGG
GAAGAAGGCGGTGGGAGAAGGGAAGGAGGGAGGAGGGGGAGAGGAGGGGG
AATGTGGAGGCGGGGAGGGAGGAGGAGAAAGAGTGAAAGAGGTGGCGGCA
GGCGCAGCGGTTTCATCAACGACAGTGTCCGCGGCGTCATCGGTGGCGAG
CAAGGAAGAGGGAGGGGAGGGGGAAGGCAAAAAAGAGGTAGAGGAGGAGG
AGGAGCGGAAAGAGGCAGAAGAGGCTCAGGGGGCGGGGATGAATGTGGAG
GCTCAGGCTGATACGAAGAAGGATGAGGAGGACAAAGTGAAGAAGGAAGA
GCACGAGGGGGAGGGAGAAGAGAAGGAGGCACAAGAAGGAATTAAAGAGG
AGGCACAGATGGTCAAGGAGGAGGAGGGGAAGGAAGGAGAGGATGACTTG
ATGCAGGTGTAGACTGAAGACAGAAAAGATAAAAAGAGATCAAGGGAAAT
GATAGACAGTACAGGAAGTATACGATGGAAGCGCATGGTTCGATGACAGT
ATTGTTGGGAAGAAGAAAGCAAACGAATGAGAAGGGAAGTACATGGTCAT
GCGTGAGTTAGTGAGTGTGTGTGTGTGTGTGCCTGTGATAAAGTAATACG
AGAGAAGGAAATAGGAAGGGGCACCGGCGATACGTATGTACGAGTAAGGT
AGTATTTCTACTTCTGTTATCGAATGGAGTTGAAGGGAAGAAGAGGGGGA
GATAGAGTGAAAGGGGTGCGTGAAAGAGTCCTATAAAAAGCGAGACATGT
GATGTGATCGTTATCATGTGATCAGTAGGGAGGGGAAAAAGGGAGAGAGA
GAGTTGTGAATCAGGAGAAAAAAGAGAAGAAGAAGAAGAGGAGGAGGAAA
AACGAGACACAGAAGGATGAAGTAAACGAAGGAAGACGACTTGCAGAGAA
AGGATGAAGAAGACTTGAGAAAGTTGGATGACAGAAACCTATCTAAAGAC
CAAAAAAACGGTCGCCAAGGCGCCTGTCAGTGAGAAGGCCGAAGGGCGTC
AATAATCAGAATGGGGGTTCATGGGAGAAAAAATGGCAGATGGGATGCGT
CCGAGGAACGAAAGTGAGTATGAGTCGGCGAAATGAAGATGAAAGACAAA
AGAAGAGATGACAAGTAGAAGGCACAT back to topprotein sequence of NO01G04170.1 >NO01G04170.1-protein ID=NO01G04170.1-protein|Name=NO01G04170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=959bp
MSEEDIPIASNPSSTTKGGQGQDKAKKGLHHQKSHVNSQAATPTSPPQEG
PAGGSVEHKRTSTGKAPPRKSSSTNKSTPSSADNTAVSASTEVVGDLGIS
SSSPSMEYSLPTVGPPKKAGKSKAKNSAAAAAAAASAAATAAPADADAHR
HMPVNGTFDAPPVAFPGSPSITSAPPPPLPSGHPSAGAPAKKSGGGSKKN
LVGREHICQHDSLCNEPRTTKDRGGGMHVFCARHKEEKQKAWREAAKRYR
ERKRLEVSWEQGQGEARRGGGGGGGAGGGALPPEFFQKGGGGSGEGIGGK
RGAAGGHVSHYKPPTAIAQPLREQLQLQQQQETEQQHHHHHHQAQQHPPF
AFPPPPMALPPPVVAGGPPPPQPLIASSPEELSNDTPSSAAAAPAGGEGA
AALTSGIKPMLPHSHSGDSINDSTGGGAPPPPLPSLPTLDRPSSPRGDRT
SHSTSSSSSSSSATSITTGTTPSSLPSSLPPYSPPAGISRAIAAWPLFWY
QKEMMRFVPMETRQLIKKDFDNFSQGRPGFRAYAVQHRLSYELNAAPRRY
RGKAGQGGLLGVKLWELEKFEWFDSLLKFLANEWWDVGVIMWCEEVGREE
GGRERSRLEAYLREAGATIERRKAVLLSLMGSVHLRSYDWQEGVEEGEEE
GGQGGREGGKGGGGPRFGQMCMVINIHGQGEVVFRKRKEGGKKEEVLRMP
LKSGDVYCYTGEYRYGCEERVELDQELSPYRCFIAIRFWLPGREWLARVV
RDEGEGGGFQGWRKLDKADKEREGRWGMEPGMVMVSPTYAGMARVMGEAD
SGAACGVAGGGGNGVGGGKKGGKKAVGEGKEGGGGEEGECGGGEGGGERV
KEVAAGAAVSSTTVSAASSVASKEEGGEGEGKKEVEEEEERKEAEEAQGA
GMNVEAQADTKKDEEDKVKKEEHEGEGEEKEAQEGIKEEAQMVKEEEGKE
GEDDLMQV* back to top
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