NO01G04130, NO01G04130 (gene) Nannochloropsis oceanica

Overview
NameNO01G04130
Unique NameNO01G04130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2335
Alignment locationchr1:1103488..1105822 +

Link to JBrowse

Properties
Property NameValue
DescriptionSignal recognition particle-docking protein FtsY
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1103488..1105822 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005178Ostalpha/TMEM184C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005623cell
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_010886595.1 (PREDICTED: transmembrane protein 184C isoform X1 [Esox lucius])

HSP 1 Score: 241.5 bits (615), Expect = 6.000e-60
Identity = 120/285 (42.11%), Postives = 178/285 (62.46%), Query Frame = 0
Query:   88 SSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGE---LDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            S    H  AW I G FV+ T+PISL+ I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +L+Y N+++Y    RE YE+YVIY F+ +L++Y+G++   L+L L+ +     +H+ P CC  PW MG   L RCK+GVLQY  +R VT ++    +  G+Y EG +S    + ++ + N +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ++ I L+V  G I E    D  S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:   38 SEVGTHNKAWFIAGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPNIAIYVDTCRECYEAYVIYNFMIFLLNYLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPPWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFSSTNAWTYLVIFNNMSQLFAMYCLVLFYKALREELAPIRPVGKFLCVKMVVFVSFWQAVFIALLVKAGVISERHTWDWVSVEAVATGLQDFVICVEMFLAAIAHHFSFTYKPYIQEAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: GAX22911.1 (hypothetical protein FisN_24Lh198 [Fistulifera solaris])

HSP 1 Score: 241.5 bits (615), Expect = 6.000e-60
Identity = 125/332 (37.65%), Postives = 200/332 (60.24%), Query Frame = 0
Query:   57 NLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPF-CCLSPWSMG-----------------AEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL-----DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVS 366
            N  + + RLV+ +  +  +L  V     +    T+  ++AW   GAFV+ T PI+++ I  HLS++ +P  Q +++R++ MVP+Y+I+SW ++R+   ++Y + +R+ YESYV+Y+F+Q+LI  +G EE LIL L+ K    G HM     CL PW MG                 + F  RCK GVLQY+ ++ ++ I+   LE+ G Y EG++S   G+ ++ +V  +SQ WALY +I FY+AT  EL  I P GKF S+K++VF +WWQS+++ ++   G I E       +++ E  AKG+QD LIC EM  AA+  +F FP ++++S
Sbjct:   98 NCLRLIGRLVVWTIILSLVLAVVWHSYELHKHKTEPIKIAWFSAGAFVLLTFPIAMYGIIMHLSHYNQPLTQMYIVRILWMVPIYSIESWLAMRFHEHAIYIETLRDFYESYVLYSFLQFLIQVLGGEESLILLLKDKSPTRGFHMWGLQFCLKPWIMGQPVRKTVGRSVKRVHWMSPFYKRCKFGVLQYVLLKFLSAIVVLLLEWKGRYKEGDFSWSSGYLYICIVTNLSQCWALYCMIFFYYATKNELAPIRPVGKFLSVKALVFFTWWQSVVLAILYQWGMIPEQLVNLEQNYTEEDAAKGIQDYLICIEMFAAALVHSFVFPHTEYLS 429          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_021183887.1 (transmembrane protein 184C [Helicoverpa armigera])

HSP 1 Score: 240.7 bits (613), Expect = 1.000e-59
Identity = 122/312 (39.10%), Postives = 196/312 (62.82%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQ-QVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL----DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIEPA 371
            R  +I+ YV  I++ V   +   + +   K +    +GG FV+  VPIS++QI QH+ ++ +P  Q H+IR++ MVP+YA+ +W  L +   S+Y   +RE YE+YVIY F++YL++Y+  +  L   L+TKP V   H+ P CCL+PW MG+EF++ CK G+LQY  +R +T +++   E  G+YGE ++S +  F ++  +N +SQ  A+Y L+LFY A   EL  + P GKF  IK+VVF S++Q ++I ++V+ G I  +    DS   ++++  +QD LIC EM +AAIA  ++F    +VSP  P+
Sbjct:   18 RPFLIALYVVLIIVLVPILIAHSINNGFKKSDQGALVGGGFVLLAVPISIWQITQHVVHYTKPILQKHIIRILWMVPIYALNAWIGLEFPEQSIYVDSLRECYEAYVIYNFMKYLLNYLNEDHDLEALLETKPQVY--HIFPLCCLTPWEMGSEFVHNCKHGILQYTVVRPITTVISMICELCGVYGESDFSPKVAFPYMIAINNLSQFVAMYCLVLFYRANKTELKPMKPIGKFLCIKAVVFFSFFQGVIINILVYCGVISTIFDISDSDKIKIMSSKLQDFLICIEMFLAAIAHHYSFSYKPYVSPQNPS 327          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: PCG68273.1 (hypothetical protein B5V51_5427 [Heliothis virescens])

HSP 1 Score: 240.7 bits (613), Expect = 1.000e-59
Identity = 122/312 (39.10%), Postives = 196/312 (62.82%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQ-QVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL----DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIEPA 371
            R  +I+ YV  I++ V   +   + +   K +    +GG FV+  VPIS++QI QH+ ++ +P  Q H+IR++ MVP+YA+ +W  L +   S+Y   +RE YE+YVIY F++YL++Y+  +  L   L+TKP V   H+ P CCL+PW MG+EF++ CK G+LQY  +R +T +++   E  G+YGE ++S +  F ++  +N +SQ  A+Y L+LFY A   EL  + P GKF  IK+VVF S++Q ++I ++V+ G I  +    DS   ++++  +QD LIC EM +AAIA  ++F    +VSP  P+
Sbjct:   18 RPFLIALYVVLIIVLVPILIAHSINNGFKKSDQGALVGGGFVLLAVPISIWQITQHVVHYTKPILQKHIIRILWMVPIYALNAWIGLEFPEQSIYVDSLRECYEAYVIYNFMKYLLNYLNEDHDLEALLETKPQVY--HIFPLCCLTPWEMGSEFVHNCKHGILQYTVVRPITTVISMICELCGVYGESDFSPKVAFPYMIAINNLSQFVAMYCLVLFYRANKTELKPMKPIGKFLCIKAVVFFSFFQGVIINILVYCGVISTIFDISDSDKIKIMSSKLQDFLICIEMFLAAIAHHYSFSYKPYVSPQNPS 327          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_022518644.1 (LOW QUALITY PROTEIN: transmembrane protein 184C-like [Astyanax mexicanus])

HSP 1 Score: 240.7 bits (613), Expect = 1.000e-59
Identity = 124/310 (40.00%), Postives = 191/310 (61.61%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQQVNFVL-TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL---DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            R +++  Y+  +L+ +    + L  S    H  AW I G FV  T+PISL+ I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +L+Y ++++Y    RE YE+YVIY F+ +L++Y+G +   L+L L+ +     RH+ P CC  PW MG   L RCK+GVLQY  +R VT ++    +  G+Y EG ++ +  + ++ +VN +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ+++I L+V  G I E    D  S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:   13 RPLVVLLYILLLLVVLPLCIWELQKSEVGTHNKAWFIAGIFVFMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAYVIYNFMIFLLNYLGKQYPSLVLMLEVQEQ--QRHLPPLCCCPPWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFNSKNAWTYLVIVNNVSQLFAMYCLVLFYKALREELGPIKPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISEXHTWDWDSVEAVATGLQDFIICVEMFLAAIAHHFSFTYKPYIQEAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_024001261.1 (transmembrane protein 184C-like [Salvelinus alpinus])

HSP 1 Score: 240.7 bits (613), Expect = 1.000e-59
Identity = 125/310 (40.32%), Postives = 191/310 (61.61%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQQVNFVL-TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGE---LDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            R +++  YV  +L+ +    + L  S    H  AW I G FV  T+PISL+ I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +LRY ++++Y    RE YE+YVIY F+ +L++Y+ ++   L+L L+ +     +H+ P CC  PW+MG   L RCK+GVLQY  +R VT ++    +  G+Y EG +S R  + ++ +VN ISQ +A+Y L+L Y A   EL  I P GKF  +K VVFAS+WQ++LI ++V  G I +    D  S E VA G+QD +IC EM +AAIA  ++F    ++   E
Sbjct:   13 RPLVVCLYVALLLVVLPLCVWELQKSEVGTHGKAWFIAGVFVFMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIALRYPSIAIYVDTCRECYEAYVIYNFLIFLLNYLSNQYPSLVLMLEVQEQ--QKHLPPLCCCPPWAMGEVLLFRCKLGVLQYTVVRAVTTVIALVCQLCGVYDEGNFSNRNAWTYLVLVNNISQLFAMYCLVLLYKALKDELSQIRPVGKFLCVKMVVFASFWQAVLIAILVKVGVISDKHTWDWDSVEAVATGLQDFIICIEMFLAAIAHHYSFTYKPYILEAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_012686781.1 (PREDICTED: transmembrane protein 184C [Clupea harengus])

HSP 1 Score: 240.0 bits (611), Expect = 1.800e-59
Identity = 124/312 (39.74%), Postives = 192/312 (61.54%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQQVNFVL-TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGELDSH-----SAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            R +++  Y+  +L+ +    + L  S    H  AW I G FV  T+PISL+ I QHL N+ +P+ Q  +IR++ MVP+Y++ SW +L+Y ++++Y    RE YE+YVIY F+ +L++Y+G++   L+L L+ +     +H+ P CC  PW MG   L+RCK+GVLQY  +R VT ++    +  G+Y EG +S +  + ++ +VN +SQ +A+Y L+LFY    +EL  I P GKF  +K VVF S+WQ++ I ++V  G I   DSH     S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:   13 RPLVVVLYILLLLVVLPFCIWELQKSGVGVHNKAWFIAGIFVFMTIPISLWGILQHLVNYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAYVIYNFMIFLLNYLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPPWPMGELLLHRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFSSKNAWTYLVIVNNLSQLFAMYCLVLFYRTLREELSPIKPVGKFLCVKLVVFVSFWQAVFIAILVKVGVIS--DSHTWDWDSVEAVATGLQDFVICVEMFLAAIAHHFSFTYKPYIQEAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: NP_001139068.1 (transmembrane protein 184C [Danio rerio])

HSP 1 Score: 240.0 bits (611), Expect = 1.800e-59
Identity = 125/312 (40.06%), Postives = 191/312 (61.22%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQQVNFVL-TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGELDSH-----SAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            R +++  Y+  +L+ +    + L  S    H  AW I G FV  T+PISL+ I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +L+Y N+++Y    RE YE+YVIY F+ +L++Y+G++   L+L L+ +     +H+ P CC  PW MG   L RCK+GVLQY  +R VT ++    +  G+Y EG +S +  + ++ + N +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ++ I L+V  G I   DSH     S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:   13 RPLVVVLYILLLLVVLPLCIWELQKSEVGTHNKAWFIAGIFVFMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPNIAIYVDTCRECYEAYVIYNFMIFLLNYLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPPWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFSSKNAWTYLVIFNNLSQLFAMYCLVLFYKALREELSPIKPVGKFLCVKLVVFVSFWQAVFIALLVKVGVIS--DSHTWDWDSVEAVATGLQDFIICVEMFLAAIAHHFSFTYKPYIQEAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: CDQ83730.1 (unnamed protein product [Oncorhynchus mykiss])

HSP 1 Score: 239.6 bits (610), Expect = 2.300e-59
Identity = 131/339 (38.64%), Postives = 195/339 (57.52%), Query Frame = 0
Query:   34 PCFCCQVADTHNKWVNGRPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGE---LDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            PC C        +W+  RP     L   LY LV++   +   +  +Q+      S    H  AW I G FV  T+PISL+ I QHL N+ +P+ Q  +IR++ MVP+Y++ SW +L+Y ++++Y    RE YE+YVIY F+ +L++Y+G++   L+L L+ +     +H+ P CC   W MG   L RCK+GVLQY  +R VT ++    +  G+Y EG +S    + ++ + N +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ+  I L+V  G I E    D  S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:    2 PCTC----GNWRRWI--RP-----LVVLLYFLVVLLVLLPLCIWELQK------SEVGTHNKAWFIAGIFVFMTIPISLWGILQHLVNYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAYVIYNFMIFLLNYLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPAWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFSSTNAWTYLVIFNNMSQLFAMYCLVLFYKALREELAPIRPVGKFLCVKMVVFVSFWQAAFIALLVKVGVISERHTWDWDSVEAVATGLQDFIICVEMFLAAIAHHFSFTYKPYIQEAE 321          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_021475082.1 (transmembrane protein 184C-like [Oncorhynchus mykiss] >CDQ83054.1 unnamed protein product [Oncorhynchus mykiss])

HSP 1 Score: 239.6 bits (610), Expect = 2.300e-59
Identity = 131/339 (38.64%), Postives = 195/339 (57.52%), Query Frame = 0
Query:   34 PCFCCQVADTHNKWVNGRPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGE---LDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            PC C        +W+  RP     L   LY LV++   +   +  +Q+      S    H  AW I G FV  T+PISL+ I QHL N+ +P+ Q  +IR++ MVP+Y++ SW +L+Y ++++Y    RE YE+YVIY F+ +L++Y+G++   L+L L+ +     +H+ P CC   W MG   L RCK+GVLQY  +R VT ++    +  G+Y EG +S    + ++ + N +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ+  I L+V  G I E    D  S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:    2 PCTC----GNWRRWI--RP-----LVVLLYFLVVLVVLLPLCIWELQK------SEVGTHNKAWFIAGIFVFMTIPISLWGILQHLVNYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAYVIYNFMIFLLNYLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPAWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFSSTNAWTYLVIFNNMSQLFAMYCLVLFYKALREELAPIRPVGKFLCVKMVVFVSFWQAAFIALLVKVGVISERHTWDWDSVEAVATGLQDFIICVEMFLAAIAHHFSFTYKPYIQEAE 321          
The following BLAST results are available for this feature:
BLAST of NO01G04130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_010886595.16.000e-6042.11PREDICTED: transmembrane protein 184C isoform X1 [... [more]
GAX22911.16.000e-6037.65hypothetical protein FisN_24Lh198 [Fistulifera sol... [more]
XP_021183887.11.000e-5939.10transmembrane protein 184C [Helicoverpa armigera][more]
PCG68273.11.000e-5939.10hypothetical protein B5V51_5427 [Heliothis viresce... [more]
XP_022518644.11.000e-5940.00LOW QUALITY PROTEIN: transmembrane protein 184C-li... [more]
XP_024001261.11.000e-5940.32transmembrane protein 184C-like [Salvelinus alpinu... [more]
XP_012686781.11.800e-5939.74PREDICTED: transmembrane protein 184C [Clupea hare... [more]
NP_001139068.11.800e-5940.06transmembrane protein 184C [Danio rerio][more]
CDQ83730.12.300e-5938.64unnamed protein product [Oncorhynchus mykiss][more]
XP_021475082.12.300e-5938.64transmembrane protein 184C-like [Oncorhynchus myki... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04130.1NO01G04130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|657968gene_428Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04130.1NO01G04130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04130 ID=NO01G04130|Name=NO01G04130|organism=Nannochloropsis oceanica|type=gene|length=2335bp
ATTCCCCAAATCATGTGTCCATACATGTGTCCATAAAAGTAGTATATTTC
TTGGCCACGCACGCCCCGTGGGAGCTTCTTTTGGCTCTGCGGGTTGGATC
CCTGCTCCGCATCCTTTGCTACGGCCCACGGAACGTGTTTCCACTAGAGC
ACCATGATGAAGCGGGACTTTGTCGAGACGGGCTACGATGCAAGCGACGA
GGACAGCGATACGGACAGTATGGAGGAGGAAGGGTACGGGAGCGCGAGCC
GGCCTTGTTTTTGTTGTCAAGTTGCCGATACCCACAACAAGTGGGTCAAT
GGGCGGCCGCCTCGCTTGCTAAACTTGCAACAGACCTTATACCGCCTCGT
CATCATCTCGACCTACGTGGGGTTCATCCTCCTGGCCGTGCAACAGGTTA
ATTTTGTGCTAACCAGTTCCACGGACAAGCACGAAATGGCTTGGACGATA
GGGGGAGCCTTCGTCATTGCTACAGTGCCCATCTCCCTCTTCCAAATATT
CCAGCACCTCTCCAACTTCGTTGAACCCAAGCAACAGACCCACGTCATCC
GCATGGTATCCATGGTCCCTCTTTATGCAATTCAATCCTGGTTTTCCCTC
CGCTACCAGAATTTGAGTTTATACACACAGTGCGTGCGAGAGGCCTACGA
ATCCTACGTCATCTATGCCTTTGTCCAATACCTCATCAGTTATATGGGTA
GCGAGGAGCAACTCATCCTTAAACTCCAGACTAAGCCCGCCGTACTTGGA
CGACATATGGCGCCTTTCTGCTGCCTCTCCCCTTGGTCGATGGGGGCCGA
GTTTCTCAATCGATGCAAGATGGGTGTGCTCCAGTACCTGGGCATCCGTC
TCGTCACCCTCATCTTGACATTCGCCTTGGAATACGTCGGGCTTTACGGA
GAAGGAGAATACTCCGTTCGGAGGGGTTTTTTCTGGGTGACCGTCGTGAA
TTGCATCTCTCAAACCTGGGCATTGTACATCCTTATTCTTTTCTATCACG
CCACCCACAAGGAGCTCATTTCCATCAACCCTTGCGGAAAATTCTTCTCG
ATTAAGTCGGTAGTCTTTGCCTCTTGGTGGCAATCCCTCTTGATTGGCTT
GATGGTTCATCAAGGGACCATAGGCGAGCTCGATAGTCATTCCGCCGAGA
TGGTTGCCAAAGGAGTGCAAGATCTGTTGATCTGTACGGAAATGCTCATG
GCTGCGATTGCATTTACTTTTGCCTTTCCCGTCTCTGACTTTGTCTCTCC
CATCGAGCCGGCCTACATGAAGGAGCCCTGGGCAACGGAGTTGAGGCAGC
CGCAGCAACAACAGCAGCAGTTGCAACAACAACAACAACACCAACAACAG
CAGGGGTATCATGAGACTGGGTGTGAGCATAGTGGGGGGAGCGGGGGAGG
GGTGGGTGGGAAGGGGAGCAGCAGTGGAGGGGTTATTGGGAGTGCTTGCA
AGAGCGCGGATGGCATAGCGTTACTAAAGGGAGGAAGTGGTGGAGGAGGG
GACTTGCGTAGGGGGGGGGGCGGGAGCGGGTATTATCACATAAGTGGATC
GTCGCATCACAACCATCAGAAACAGCATCTACGAAGTGGTGGTGGAGGTG
GGGGGGGGGGGGGGGGGGGAGGTACCTTCGATTTGGGCGGCATTGTGGAC
AAGTTGTGTGCCAATGGATGTGAGGGAGGATTTCAAGTTAGCGACGTACC
AGGTCATGGACGACTGTTCGTGTTTCAAACGAAACGGGGGGAATGGAGGT
TTGAATGGGAGCTGGTGGCCCTGTCGGTGTAGAAGTCGCTGTGGGCAGAC
CAAGGCGCACAGGAGCACCGGCAGCGGTATGAATGGGAGTGGGAGGGACG
GGGGTAGCGGGGTTAGTAAGGCAGGTGGGAGACATTCCTCCGCAGCCGCG
TCCTCGTCCTCTGTCACCGGTCCGCCAATGGTGGCGATGGTTGGAGCCGT
GGGTACGAGCAACAGCAGCGGTGGGAATTGATCGTATTTCGGTAAGAGCC
AGACGGATTCGGCGGGGGCGGATGGGAAACGTCGCTAGAGGGAGCTCCTC
CACGAATGCTGGTGGGGGTGCTTTCGCCAGCATTGTCATCAGCCACATCG
TTTCACCGTCTCCCTCAATATCCTCCACCTTCTTCCAATTGCCGTTGTTG
ATTTAGCGTTCAAAAGTGAAAAATGAGCTGAAATGGTAAAGCAGTGTCCA
TGGTAAGTAAGGATGTCGCTGTGTGTGAGATGGGATCTCGCCAGTGACCT
CATAAAAAAGGTGCCCGATTTGAGAGTTTGTGCAAAAGAAGTGGGACATC
AGAACTGAAGAATTATCTTTAGTAATAGACTCTGG
back to top

protein sequence of NO01G04130.1

>NO01G04130.1-protein ID=NO01G04130.1-protein|Name=NO01G04130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=543bp
MMKRDFVETGYDASDEDSDTDSMEEEGYGSASRPCFCCQVADTHNKWVNG
RPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIG
GAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLR
YQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGR
HMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGE
GEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSI
KSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKGVQDLLICTEMLMA
AIAFTFAFPVSDFVSPIEPAYMKEPWATELRQPQQQQQQLQQQQQHQQQQ
GYHETGCEHSGGSGGGVGGKGSSSGGVIGSACKSADGIALLKGGSGGGGD
LRRGGGGSGYYHISGSSHHNHQKQHLRSGGGGGGGGGGGGTFDLGGIVDK
LCANGCEGGFQVSDVPGHGRLFVFQTKRGEWRFEWELVALSV*
back to top
Synonyms
Publications