NO01G04130, NO01G04130 (gene) Nannochloropsis oceanica

Overview
NameNO01G04130
Unique NameNO01G04130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2335
Alignment locationchr1:1103488..1105822 +

Link to JBrowse

Properties
Property NameValue
DescriptionSignal recognition particle-docking protein FtsY
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1103488..1105822 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005178Ostalpha/TMEM184C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005623cell
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Homology
BLAST of NO01G04130 vs. NCBI_GenBank
Match: EWM29383.1 (signal recognition particle-docking protein FtsY [Nannochloropsis gaditana])

HSP 1 Score: 662.1 bits (1707), Expect = 1.400e-186
Identity = 328/375 (87.47%), Postives = 346/375 (92.27%), Query Frame = 0
Query:    1 MMKRDFVETGYDASDEDSDTDSMEEEGYGSASRPCFCCQVADTHNKWVNGRPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIEPAYMKEP 376
            MMKRD VET YDASDEDSD DS  EEG  S SRPCFCCQVAD+  K V+GRPPRLLN QQ+L RL +ISTYV FI LAVQQVNFVLT+STDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRM+SMVPLYAIQSWFSLRYQ+LSLYTQCVREAYESYVIYAFVQYLI+YMGSE QLI KL+TKPAVLGRHMAPFCCL PWSMGAEFL RCK+GVLQYLG+RL TL+LTFALE + LY EGEY+VRRGFFW+TV NCISQTWALYILILFYHATHKELISINPCGKFFS+KSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAK +QDLLICTEM MAAIAFTFAFPVSDFVSPIEP Y K+P
Sbjct:  543 MMKRDIVETDYDASDEDSDCDSQGEEGIVSGSRPCFCCQVADSQIKRVSGRPPRLLNFQQSLSRLAMISTYVCFIFLAVQQVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDP 917          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_005854122.1 (transmembrane protein 184c [Nannochloropsis gaditana CCMP526] >EKU22243.1 transmembrane protein 184c [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 563.9 bits (1452), Expect = 5.300e-157
Identity = 289/374 (77.27%), Postives = 303/374 (81.02%), Query Frame = 0
Query:    2 MKRDFVETGYDASDEDSDTDSMEEEGYGSASRPCFCCQVADTHNKWVNGRPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIEPAYMKEP 376
            MKRD VET YDASDEDSD DS  EEG                                                     QVNFVLT+STDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRM+SMVPLYAIQSWFSLRYQ+LSLYTQCVREAYESYVIYAFVQYLI+YMGSE QLI KL+TKPAVLGRHMAPFCCL PWSMGAEFL RCK+GVLQYLG+RL TL+LTFALE + LY EGEY+VRRGFFW+TV NCISQTWALYILILFYHATHKELISINPCGKFFS+KSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAK +QDLLICTEM MAAIAFTFAFPVSDFVSPIEP Y K+P
Sbjct:    1 MKRDIVETDYDASDEDSDCDSQGEEGI----------------------------------------------------QVNFVLTNSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMISMVPLYAIQSWFSLRYQSLSLYTQCVREAYESYVIYAFVQYLINYMGSEAQLIRKLETKPAVLGRHMAPFCCLPPWSMGAEFLKRCKVGVLQYLGVRLATLVLTFALESLDLYAEGEYTVRRGFFWMTVANCISQTWALYILILFYHATHKELISINPCGKFFSVKSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKAIQDLLICTEMFMAAIAFTFAFPVSDFVSPIEPPYYKDP 322          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: CBJ27389.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 299.7 bits (766), Expect = 1.900e-77
Identity = 149/315 (47.30%), Postives = 216/315 (68.57%), Query Frame = 0
Query:   63 YRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTI-----------GELDSHS-AEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFV 365
            Y L+++  Y+    LA Q+VN+ L    +K ++A T+GGA +  TVP++ +QI  HLSNFVEP+QQ+ ++R+V MVP Y++ ++ SLR+ + SL+   VR+ YE+YVIY F+ +L+  +G        +L   P V+GRH+ PFCCL PW MG EFL RC+ GV QY+ IRLV+  +  AL+   LY EG++  +RG+ W+TVV C SQ+WALY+L+LFY AT+KEL+ I+P GKF +IK++VF SWWQ +LI ++  QG             G+L  H  +E VA+G+QDLLIC EML+AA+ F +AFP+SD++
Sbjct:   70 YMLLLVYAYL--FWLAGQRVNYALVHVENKFDVARTLGGALMCLTVPLATYQIVLHLSNFVEPRQQSQIVRIVFMVPTYSVTAFLSLRFMHWSLFITTVRDCYEAYVIYCFLHFLVGTLGDGLPAANSRLAAMPPVVGRHVPPFCCLEPWQMGREFLQRCQAGVFQYVLIRLVSTAVALALQLGHLYTEGDFDPKRGYLWITVVTCCSQSWALYVLVLFYRATYKELVHIHPMGKFLAIKTIVFFSWWQGILIEILEGQGYFASVVGVSSGEGGDLSEHDPSEHVAQGIQDLLICLEMLVAAVFFFYAFPLSDYL 382          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_002289060.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED94496.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 250.0 bits (637), Expect = 1.700e-62
Identity = 126/284 (44.37%), Postives = 185/284 (65.14%), Query Frame = 0
Query:   91 DKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHM-APFCCLSPWSMG----AEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLI------GLMVHQGTIGELDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDF 364
            D H +AW   GAFV+   PIS+  IF HL+N+ +P  Q +V+R++ MVP+Y+I+SW  LR+   ++Y + +R+ YESYV+Y+F+Q+LI+ +G EE L+L L+ K    G HM      + PW MG    + F  +CK+GVLQY+ +++V+ I+   LE  GLY EG+++ R G+ ++ ++  +SQ WALY L  FY+AT  EL  I P GKF S+K+VVF +WWQSL I      G++ H   + +    +AE VAKG+QD LIC EM +AAI  TF FP +D+
Sbjct:    1 DPHLIAWFSAGAFVLLGFPISMCGIFMHLTNYYQPNVQCYVVRILWMVPIYSIESWLCLRFHTAAIYIETLRDVYESYVLYSFLQFLIAVLGGEEALVLMLKDKSPTRGVHMWGMNWFIKPWLMGQPWTSPFFVKCKLGVLQYVLLKVVSSIIVMFLEIYGLYKEGDFTPRGGYLYICIITNLSQCWALYCLAFFYYATKNELGPIRPVGKFLSVKAVVFFTWWQSLGISILFQMGMIPHYAAVDDGREWTAEAVAKGLQDYLICIEMFVAAIVHTFVFPHTDY 284          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_011568372.1 (PREDICTED: transmembrane protein 184C [Plutella xylostella])

HSP 1 Score: 249.6 bits (636), Expect = 2.200e-62
Identity = 126/312 (40.38%), Postives = 197/312 (63.14%), Query Frame = 0
Query:   62 LYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL----DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIEP 370
            L  L +I   V   +L V+ +N    +   K +    +GGAFV+  +PIS++QI QH+ ++ +P  Q H+IR++ MVP+YA+ +W  L +   S+Y   +RE YE+YVIY F++YL++Y+  ++ L   L+TKP +   H+ P CCLSPW MG EF++ CK G+LQY  +R VT +++   E  G+YGE ++S R  F ++ ++N  SQ  A+Y L+LFY A   EL  + P GKF  IK+VVF S++Q +LI ++V+ G I  +    DS   ++++  +QD LIC EM +AAIA  ++F    +VSP++P
Sbjct:   21 LIALYVILIIVLVPILIVKSIN----NGFKKSDQGALVGGAFVLLALPISIWQIIQHIVHYTKPSLQKHIIRILWMVPIYALNAWIGLMFPEQSIYFDALRECYEAYVIYNFMKYLLNYLNEDQDLEAVLETKPQIY--HIFPLCCLSPWEMGREFVHNCKHGILQYTVVRPVTTVISMICEINGVYGESDFSPRVAFPYMIIINNFSQFIAMYCLVLFYRANRAELKPMKPIGKFLCIKAVVFFSFFQGVLINILVYSGVISSIFDIVDSGEIKIISSELQDFLICIEMFLAAIAHHYSFSYKPYVSPLDP 326          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_018591581.1 (PREDICTED: transmembrane protein 184C-like [Scleropages formosus] >XP_018591582.1 PREDICTED: transmembrane protein 184C-like [Scleropages formosus] >XP_018591584.1 PREDICTED: transmembrane protein 184C-like [Scleropages formosus])

HSP 1 Score: 244.2 bits (622), Expect = 9.300e-61
Identity = 122/286 (42.66%), Postives = 180/286 (62.94%), Query Frame = 0
Query:   87 TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGE---LDSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            TS    H  AW I G FV  T+PISL++I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +L+Y ++++Y    RE YE++VIY F+ +L++Y+G++   L+L L+ +     +H+ P CC  PW MG   L RCK+GVLQY  +R VT ++    E  G+Y EG +S +  + ++ V N +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ++LI L+V  G I E    D  S E VA G+QD +IC EM +AAIA  + F    +V   E
Sbjct:   37 TSEVGTHTKAWFIAGIFVFMTIPISLWEILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPSIAIYVDTCRECYEAFVIYNFMTFLLNYLGNQYPNLVLMLEVQEQ--QKHLPPLCCCPPWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICELCGVYDEGNFSSKNAWTYLVVFNNLSQLFAMYCLVLFYRALREELSPIQPVGKFLCVKLVVFVSFWQAVLIALLVKVGVISESHTWDWDSVEAVATGLQDFVICVEMFLAAIAHHYTFSYKPYVREAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_016411046.1 (PREDICTED: transmembrane protein 184C-like [Sinocyclocheilus rhinocerous])

HSP 1 Score: 242.3 bits (617), Expect = 3.500e-60
Identity = 124/310 (40.00%), Postives = 192/310 (61.94%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQQVNFVL-TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL---DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            R +++  Y+  +L+ +    + L  S    H  AW I G FV  T+PISL+ I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +L+Y N+++Y    RE YE+YVIY F+ +L++++G++   L+L L+ +     +H+ P CC  PW MG   L RCK+GVLQY  +R VT ++    +  G+Y EG +S +  + ++ +VN +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ+ +I L+V  G I +L   D  S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:   13 RPLVVLLYILLLLVVLPLCIWELQKSGVSTHNKAWFIAGIFVFMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPNIAIYVDTCRECYEAYVIYNFMIFLLNFLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPPWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQLCGVYDEGNFSSKNAWTYLVIVNNLSQLFAMYCLVLFYKALREELSPIKPVGKFLCVKLVVFVSFWQAAVIALLVKVGVISDLHTWDWDSVEAVATGLQDFIICVEMFLAAIAHHFSFTYKPYIQEAE 320          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: OWR55459.1 (hypothetical protein KGM_205665 [Danaus plexippus plexippus])

HSP 1 Score: 242.3 bits (617), Expect = 3.500e-60
Identity = 120/309 (38.83%), Postives = 195/309 (63.11%), Query Frame = 0
Query:   66 VIISTYVGFILLAVQ-QVNFVLTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL----DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIEP 370
            + I+TYV  +++ V   +   + +   K + +  IGG FV+  VPIS++QI QH+ ++ +P  Q H+IR++ MVP+YA+ +W  L +   S+Y   +RE YE+YVIY F++YL +Y+   + L   L+TKP V   H+ P CCL+PW MG+EF++ CK G+LQY  IR +T +++   +  G+YGE ++S    F ++  +N +SQ  A+Y L+LFY A   EL  + P GKF  IK+VVF S++Q ++I ++V+ G I  +    D+   ++++  +QD LIC EM +AAIA  ++F    ++SP+ P
Sbjct:    1 MFIATYVLLVIILVPLLIVHSINNGFTKSDQSTLIGGGFVLLAVPISIWQITQHIVHYTKPSLQKHIIRILWMVPIYALNAWIGLEFPEQSIYMDALRECYEAYVIYNFMKYLFNYLNDGQDLEALLETKPQV--NHIFPLCCLTPWEMGSEFVHNCKHGILQYTLIRPLTTVISIICDLCGVYGESDFSPNVAFPYIIAINNLSQFVAMYCLVLFYRANRAELKPMKPIGKFLCIKAVVFFSFFQGVIINILVYCGVISTIFDISDNDKIKIISSKLQDFLICIEMFLAAIAHHYSFSYKPYISPLAP 307          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_014786144.1 (PREDICTED: transmembrane protein 184C-like isoform X1 [Octopus bimaculoides] >KOF69217.1 hypothetical protein OCBIM_22005495mg [Octopus bimaculoides])

HSP 1 Score: 241.9 bits (616), Expect = 4.600e-60
Identity = 135/335 (40.30%), Postives = 193/335 (57.61%), Query Frame = 0
Query:   35 CFCCQVADTHNKWVNGRPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFV--LTSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGELDS---HSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFV 365
            CFC  +    ++  +     LL  +  +  LV+  T+ G  LL    +  V    +  + H   W +GG FV+  +PISL+ I QHL ++ +   Q H+IR++ MVP+YA+ +WF+LR+   ++Y   +RE YE+YVIY F+ YL+SY+ +E  L + L  K  V   H  PFC   PW MG +F+  CK GVLQY  IR  T +L       G Y EGE++V   + ++  +N  SQ WA+Y LILFY A  +EL  INP  KF  +K+VVF S+WQ++LI  +V  G I E  S   +S +MVA G+QD  IC EM +AAIA  F+F    F+
Sbjct:   35 CFCLSIDGVFSRLFSLTMDLLLRWRHWIRPLVM--TFYGVCLLVALPLCIVELHKAGAETHVEGWFVGGLFVMMALPISLWGILQHLIHYTQAHLQRHIIRILWMVPIYALNAWFALRFPQAAIYLDTLRECYEAYVIYNFMSYLLSYLHNEYSLEVVLSLKSQV--NHFFPFCLHPPWPMGRKFIRNCKHGVLQYTIIRPTTTVLALITALCGKYDEGEFNVDSAWPYLVFINNASQVWAMYNLILFYKAVKEELQPINPIPKFLCVKAVVFLSFWQAVLIAALVKTGVITEKTSWGYYSVKMVASGLQDFCICIEMFLAAIAHYFSFSHKPFI 365          
BLAST of NO01G04130 vs. NCBI_GenBank
Match: XP_018948275.1 (PREDICTED: transmembrane protein 184C-like [Cyprinus carpio])

HSP 1 Score: 241.9 bits (616), Expect = 4.600e-60
Identity = 125/310 (40.32%), Postives = 193/310 (62.26%), Query Frame = 0
Query:   64 RLVIISTYVGFILLAVQQVNFVL-TSSTDKHEMAWTIGGAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLRYQNLSLYTQCVREAYESYVIYAFVQYLISYMGSE-EQLILKLQTKPAVLGRHMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGEGEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSIKSVVFASWWQSLLIGLMVHQGTIGEL---DSHSAEMVAKGVQDLLICTEMLMAAIAFTFAFPVSDFVSPIE 369
            R +++  YV  +L+ +    + L  S       AW I G FV  T+PISL+ I QHL ++ +P+ Q  +IR++ MVP+Y++ SW +L+Y N+++Y    RE YE+YVIY F+ +L++++G++   L+L L+ +     +H+ P CC  PW MG   L RCK+GVLQY  +R VT ++    ++ G+Y EG +S +  + ++ +VN +SQ +A+Y L+LFY A  +EL  I P GKF  +K VVF S+WQ+++I L+V  G I EL   D  S E VA G+QD +IC EM +AAIA  F+F    ++   E
Sbjct:   13 RPLVVLLYVLLLLVVLPLCVWELQKSGVSTPNKAWFIAGIFVFMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIALKYPNIAIYVDTCRECYEAYVIYNFMIFLLNFLGNQYPSLVLMLEVQEQ--QKHLPPLCCCPPWPMGEVLLLRCKLGVLQYTVVRPVTTVIALICQHCGVYDEGNFSSKNAWTYLVIVNNLSQLFAMYCLVLFYKALREELSPIKPVGKFLCVKLVVFVSFWQAVVIALLVKVGVISELHTWDWDSVEAVATGLQDFIICVEMFLAAIAHHFSFTYKPYIQEAE 320          
The following BLAST results are available for this feature:
BLAST of NO01G04130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29383.11.400e-18687.47signal recognition particle-docking protein FtsY [... [more]
XP_005854122.15.300e-15777.27transmembrane protein 184c [Nannochloropsis gadita... [more]
CBJ27389.11.900e-7747.30conserved unknown protein [Ectocarpus siliculosus][more]
XP_002289060.11.700e-6244.37predicted protein, partial [Thalassiosira pseudona... [more]
XP_011568372.12.200e-6240.38PREDICTED: transmembrane protein 184C [Plutella xy... [more]
XP_018591581.19.300e-6142.66PREDICTED: transmembrane protein 184C-like [Sclero... [more]
XP_016411046.13.500e-6040.00PREDICTED: transmembrane protein 184C-like [Sinocy... [more]
OWR55459.13.500e-6038.83hypothetical protein KGM_205665 [Danaus plexippus ... [more]
XP_014786144.14.600e-6040.30PREDICTED: transmembrane protein 184C-like isoform... [more]
XP_018948275.14.600e-6040.32PREDICTED: transmembrane protein 184C-like [Cyprin... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04130.1NO01G04130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|657968gene_428Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04130.1NO01G04130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04130 ID=NO01G04130|Name=NO01G04130|organism=Nannochloropsis oceanica|type=gene|length=2335bp
ATTCCCCAAATCATGTGTCCATACATGTGTCCATAAAAGTAGTATATTTC
TTGGCCACGCACGCCCCGTGGGAGCTTCTTTTGGCTCTGCGGGTTGGATC
CCTGCTCCGCATCCTTTGCTACGGCCCACGGAACGTGTTTCCACTAGAGC
ACCATGATGAAGCGGGACTTTGTCGAGACGGGCTACGATGCAAGCGACGA
GGACAGCGATACGGACAGTATGGAGGAGGAAGGGTACGGGAGCGCGAGCC
GGCCTTGTTTTTGTTGTCAAGTTGCCGATACCCACAACAAGTGGGTCAAT
GGGCGGCCGCCTCGCTTGCTAAACTTGCAACAGACCTTATACCGCCTCGT
CATCATCTCGACCTACGTGGGGTTCATCCTCCTGGCCGTGCAACAGGTTA
ATTTTGTGCTAACCAGTTCCACGGACAAGCACGAAATGGCTTGGACGATA
GGGGGAGCCTTCGTCATTGCTACAGTGCCCATCTCCCTCTTCCAAATATT
CCAGCACCTCTCCAACTTCGTTGAACCCAAGCAACAGACCCACGTCATCC
GCATGGTATCCATGGTCCCTCTTTATGCAATTCAATCCTGGTTTTCCCTC
CGCTACCAGAATTTGAGTTTATACACACAGTGCGTGCGAGAGGCCTACGA
ATCCTACGTCATCTATGCCTTTGTCCAATACCTCATCAGTTATATGGGTA
GCGAGGAGCAACTCATCCTTAAACTCCAGACTAAGCCCGCCGTACTTGGA
CGACATATGGCGCCTTTCTGCTGCCTCTCCCCTTGGTCGATGGGGGCCGA
GTTTCTCAATCGATGCAAGATGGGTGTGCTCCAGTACCTGGGCATCCGTC
TCGTCACCCTCATCTTGACATTCGCCTTGGAATACGTCGGGCTTTACGGA
GAAGGAGAATACTCCGTTCGGAGGGGTTTTTTCTGGGTGACCGTCGTGAA
TTGCATCTCTCAAACCTGGGCATTGTACATCCTTATTCTTTTCTATCACG
CCACCCACAAGGAGCTCATTTCCATCAACCCTTGCGGAAAATTCTTCTCG
ATTAAGTCGGTAGTCTTTGCCTCTTGGTGGCAATCCCTCTTGATTGGCTT
GATGGTTCATCAAGGGACCATAGGCGAGCTCGATAGTCATTCCGCCGAGA
TGGTTGCCAAAGGAGTGCAAGATCTGTTGATCTGTACGGAAATGCTCATG
GCTGCGATTGCATTTACTTTTGCCTTTCCCGTCTCTGACTTTGTCTCTCC
CATCGAGCCGGCCTACATGAAGGAGCCCTGGGCAACGGAGTTGAGGCAGC
CGCAGCAACAACAGCAGCAGTTGCAACAACAACAACAACACCAACAACAG
CAGGGGTATCATGAGACTGGGTGTGAGCATAGTGGGGGGAGCGGGGGAGG
GGTGGGTGGGAAGGGGAGCAGCAGTGGAGGGGTTATTGGGAGTGCTTGCA
AGAGCGCGGATGGCATAGCGTTACTAAAGGGAGGAAGTGGTGGAGGAGGG
GACTTGCGTAGGGGGGGGGGCGGGAGCGGGTATTATCACATAAGTGGATC
GTCGCATCACAACCATCAGAAACAGCATCTACGAAGTGGTGGTGGAGGTG
GGGGGGGGGGGGGGGGGGGAGGTACCTTCGATTTGGGCGGCATTGTGGAC
AAGTTGTGTGCCAATGGATGTGAGGGAGGATTTCAAGTTAGCGACGTACC
AGGTCATGGACGACTGTTCGTGTTTCAAACGAAACGGGGGGAATGGAGGT
TTGAATGGGAGCTGGTGGCCCTGTCGGTGTAGAAGTCGCTGTGGGCAGAC
CAAGGCGCACAGGAGCACCGGCAGCGGTATGAATGGGAGTGGGAGGGACG
GGGGTAGCGGGGTTAGTAAGGCAGGTGGGAGACATTCCTCCGCAGCCGCG
TCCTCGTCCTCTGTCACCGGTCCGCCAATGGTGGCGATGGTTGGAGCCGT
GGGTACGAGCAACAGCAGCGGTGGGAATTGATCGTATTTCGGTAAGAGCC
AGACGGATTCGGCGGGGGCGGATGGGAAACGTCGCTAGAGGGAGCTCCTC
CACGAATGCTGGTGGGGGTGCTTTCGCCAGCATTGTCATCAGCCACATCG
TTTCACCGTCTCCCTCAATATCCTCCACCTTCTTCCAATTGCCGTTGTTG
ATTTAGCGTTCAAAAGTGAAAAATGAGCTGAAATGGTAAAGCAGTGTCCA
TGGTAAGTAAGGATGTCGCTGTGTGTGAGATGGGATCTCGCCAGTGACCT
CATAAAAAAGGTGCCCGATTTGAGAGTTTGTGCAAAAGAAGTGGGACATC
AGAACTGAAGAATTATCTTTAGTAATAGACTCTGG
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protein sequence of NO01G04130.1

>NO01G04130.1-protein ID=NO01G04130.1-protein|Name=NO01G04130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=543bp
MMKRDFVETGYDASDEDSDTDSMEEEGYGSASRPCFCCQVADTHNKWVNG
RPPRLLNLQQTLYRLVIISTYVGFILLAVQQVNFVLTSSTDKHEMAWTIG
GAFVIATVPISLFQIFQHLSNFVEPKQQTHVIRMVSMVPLYAIQSWFSLR
YQNLSLYTQCVREAYESYVIYAFVQYLISYMGSEEQLILKLQTKPAVLGR
HMAPFCCLSPWSMGAEFLNRCKMGVLQYLGIRLVTLILTFALEYVGLYGE
GEYSVRRGFFWVTVVNCISQTWALYILILFYHATHKELISINPCGKFFSI
KSVVFASWWQSLLIGLMVHQGTIGELDSHSAEMVAKGVQDLLICTEMLMA
AIAFTFAFPVSDFVSPIEPAYMKEPWATELRQPQQQQQQLQQQQQHQQQQ
GYHETGCEHSGGSGGGVGGKGSSSGGVIGSACKSADGIALLKGGSGGGGD
LRRGGGGSGYYHISGSSHHNHQKQHLRSGGGGGGGGGGGGTFDLGGIVDK
LCANGCEGGFQVSDVPGHGRLFVFQTKRGEWRFEWELVALSV*
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Synonyms
Publications