NO01G04120, NO01G04120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04120 vs. NCBI_GenBank
Match: EWM29383.1 (signal recognition particle-docking protein FtsY [Nannochloropsis gaditana]) HSP 1 Score: 707.2 bits (1824), Expect = 3.800e-200 Identity = 391/495 (78.99%), Postives = 422/495 (85.25%), Query Frame = 0 Query: 1 MLQCCRLLLPLCLLP---LLISAFVNPSFGATSSFLDDGRRCTLR-PSYYIVDDSSS----GGPRPRRQGHADMMVFDFIRKRAEEGIQQVQNIATKTAEGKFAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKAEKLEPDDVKSVLRLRLIEALSVQDRALQL-ASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLGYEPEYALALESRLQGMVKGKLIKPKGGVLVRSVTASSTGNNADAEDIADRMARKVAGQRGQ 487 MLQ LLLPL +LP +AFV P G S+ DGR+ + P Y +D+ S R RRQG + MMVFDFIRKRAEEGIQQVQNIATKTAEGKF EAL DTASYVKKRQEIDAENL KLQEGLAKSRQRLMGDLD IFG SED+GLT+TL+KLEEVLMM+DIGAATT +I+DDLR VAKAEKLEPDDVKSVLRLRLIEAL+ +DR++QL A A GK+YP+VLFVIGANGMGKTTTIGKIASRL EANQSVLVAACDTFRAAAVDQLEEWT RAGVDIH+PGEG+TKPAPVL+ AI+KAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIAD IPGGP ETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGI+DLRDFNPEDFVDALLGYEPE LALE+RLQ MV+GKLIKPK GV+VRS N DA+DI+DRM RKV G+ GQ Sbjct: 1 MLQYHLLLLPLLMLPWAGWTQAAFVTPRVGGPRSY-GDGRKYRVGVPFYSSIDEVDSPIYTTASRSRRQGESHMMVFDFIRKRAEEGIQQVQNIATKTAEGKFVEALGDTASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRGVIVRS-EGGGGDKNMDADDISDRMRRKVQGRGGQ 493
BLAST of NO01G04120 vs. NCBI_GenBank
Match: XP_005854120.1 (fused signal recognition particle receptor [Nannochloropsis gaditana CCMP526] >EKU22241.1 fused signal recognition particle receptor [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 595.1 bits (1533), Expect = 2.100e-166 Identity = 316/369 (85.64%), Postives = 338/369 (91.60%), Query Frame = 0 Query: 97 EALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKAEKLEPDDVKSVLRLRLIEALSVQDRALQL-ASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLGYEPEYALALESRLQGMVKGKLIKPKGGVLVRSVTASSTG 465 E T++ASYVKKRQEIDAENL KLQEGLAKSRQRLMGDLD IFG SED+GLT+TL+KLEEVLMM+DIGAATT +I+DDLR VAKAEKLEPDDVKSVLRLRLIEAL+ +DR++QL A A GK+YP+VLFVIGANGMGKTTTIGKIASRL EANQSVLVAACDTFRAAAVDQLEEWT RAGVDIH+PGEG+TKPAPVL+ AI+KAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIAD IPGGP ETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGI+DLRDFNPEDFVDALLGYEPE LALE+RLQ MV+GKLIKPK G T S+TG Sbjct: 4 EENTESASYVKKRQEIDAENLAKLQEGLAKSRQRLMGDLDVIFGVSEDVGLTKTLDKLEEVLMMSDIGAATTGEIIDDLRMVAKAEKLEPDDVKSVLRLRLIEALTAKDRSMQLKKEASAGNGKSYPRVLFVIGANGMGKTTTIGKIASRLKNEANQSVLVAACDTFRAAAVDQLEEWTVRAGVDIHRPGEGQTKPAPVLEEAISKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADGIPGGPHETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGIDDLRDFNPEDFVDALLGYEPEQVLALEARLQDMVQGKLIKPKRG------TISATG 366
BLAST of NO01G04120 vs. NCBI_GenBank
Match: CBJ31918.1 (PFtsY, plastid signal recognition particle receptor [Ectocarpus siliculosus]) HSP 1 Score: 386.3 bits (991), Expect = 1.500e-103 Identity = 211/375 (56.27%), Postives = 267/375 (71.20%), Query Frame = 0 Query: 70 DFIRKRAEEGIQQVQNIATKTAEGKFAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKAE--KLEPDDVKSVLRLRLIEAL------SVQDRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLGYEPEYALALES 437 DFI+KRA+EG++Q QN+ T G+ EAL +T++YVK R K +GLA+SR R +GDL+++FG + L +TL KLEE L+ AD+GA T+ QI++DLR AKAE +LEPDD+KSVLR LI+ L S + A A P VLF +GANGMGKTTT+GK+ASRL ++ Q VL+AA DTFRAAAV+QL EW ER+G DI P + + +P V+ A KA+ YDVLIVDTSGRLSNN +LNEELK +K+ ++DRIPG P +TLLV+D +VGRN VDQA+ W +EVGI+ LV+TKLDGTARGG VVSIV D+GVPVKLIGVGE + DLRDF P FVD+LLGY PE A L++ Sbjct: 98 DFIKKRAQEGVEQTQNLVTAAQTGRLDEALKETSAYVKDRN-------AKFSDGLAQSRLRFVGDLENLFGMAGP--LEETLEKLEEALLQADLGATTSFQIIEDLRNTAKAEDRRLEPDDIKSVLRATLIQVLNGGTMPSAEGGGDTAAITFADPSLGVPSVLFFMGANGMGKTTTVGKVASRLREDGGQKVLLAAADTFRAAAVEQLNEWAERSGADIVVPLDKDERPPSVVARAAEKAVSEGYDVLIVDTSGRLSNNYSLNEELKDMKKALSDRIPGAPHDTLLVVDASVGRNAVDQARTWKQEVGISALVVTKLDGTARGGFVVSIVSDLGVPVKLIGVGESLYDLRDFEPVLFVDSLLGYSPEDASRLQA 463
BLAST of NO01G04120 vs. NCBI_GenBank
Match: CEM32712.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 349.0 bits (894), Expect = 2.600e-92 Identity = 193/413 (46.73%), Postives = 267/413 (64.65%), Query Frame = 0 Query: 56 PRPRRQG----------HADMMVFDFIRKRAEEGIQQVQNIATKTAEGKFAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKAEKLEPDDVKSVLRLRLIEALSVQDRALQLASAPAV--EGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEG--------DYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLGYEPEYALALESRLQGMVKGKLIK 449 P PRR+ H M+ DFI+++A+E I ++ + ENL K QEGL+KSR RL+ L +FG ++ L + L +LEE+L+ ADIG ATT IL DLRA A+ EK++P+D+K VLR +++E L + + +P+ + V V+GANGMGKTTTIGK+A+RL E + VLVAACDTFRAAAVDQLEEW RA VDIH+P EGET+P V++ A+ +A+ YDV+IVDT+GRL+NNV LNEEL+K+ + + R+P P E LLV+D ++GRN V+QA++W ++G+TGLV+TKLDGTAR G VVS+VRD+ +PVKL+GVGE + DLRDF+ E++VDAL GY P+ A LE R+ +++ + K Sbjct: 52 PLPRRRATRPYARRPTHHQPSMILDFIQRKAQEDIDKLSKV---------------------------GENLQKFQEGLSKSRDRLLASLSGLFG-MVNLELEEALEQLEEILLSADIGTATTADILTDLRATARGEKIDPEDIKMVLRGKILEVLRMGTDKGETTESPSALRYSPDGLTVWMVMGANGMGKTTTIGKLAARLRGEGKR-VLVAACDTFRAAAVDQLEEWANRAQVDIHRPQEGETEPWKVVEAALDEALTPLPDESGRLPYDVMIVDTAGRLANNVDLNEELEKMVKVTSKRLPAAPAEILLVVDASIGRNAVEQARIWQEDIGVTGLVVTKLDGTARAGFVVSVVRDLNLPVKLVGVGEKLEDLRDFDAENYVDALFGYNPQQARLLEERMGALMRERAEK 435
BLAST of NO01G04120 vs. NCBI_GenBank
Match: GAX21145.1 (fused signal recognition particle receptor [Fistulifera solaris]) HSP 1 Score: 326.2 bits (835), Expect = 1.800e-85 Identity = 181/375 (48.27%), Postives = 251/375 (66.93%), Query Frame = 0 Query: 67 MVFDFIRKRAEEGIQQVQNIATKTAEGKFAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKA--EKLEPDDVKSVLRLRLIEALSV-QDRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIP-------------GGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLG 426 MVFDF + R +EGI Q+ N+A ++G+ + L D ASY +R + A EGL+KSR R + L+ +F I + + +LE+VL+ AD+G AT E I+ +++++ ++ ++L +D+ S++R +++EAL Q R +Q + P N P VLF++GANGMGKTTTIGK+A RL E NQ+VLVAACDTFRA AV QL++W +RA VD+ P + PA VL +A+ KA+ YD L+VDTSGRLSNN AL +EL K+KR I R+ P ETLLV+D A GR +D A+VWN+E+G+TGL++TKLDG+ARGG VV++ RD+ +PVKLIGVGEG+ DLRDF P+ FVD LLG Sbjct: 38 MVFDFFKDRTKEGIDQLNNLAKSASQGQLGKGLADVASYTNERNKAFA-------EGLSKSRNRFLDRLEFLF---TGIDPEEMMQELEDVLLQADLGIATAEDIVQEVQSLRESSRQRLSREDLMSIMRGKILEALETEQSRMIQFSQDP-----NLPTVLFILGANGMGKTTTIGKLAHRLRTEGNQTVLVAACDTFRAGAVAQLQQWADRAQVDLVGPTDTVKSPAAVLYSALDKAVLEKYDTLLVDTSGRLSNNEALTQELVKMKRVIQKRLSQQNNEKGFPIPNMNVPHETLLVIDAAQGRMALDSAQVWNKEIGLTGLILTKLDGSARGGSVVAVSRDLQLPVKLIGVGEGMEDLRDFEPDGFVDGLLG 397
BLAST of NO01G04120 vs. NCBI_GenBank
Match: GAX15342.1 (fused signal recognition particle receptor [Fistulifera solaris]) HSP 1 Score: 325.9 bits (834), Expect = 2.400e-85 Identity = 181/375 (48.27%), Postives = 251/375 (66.93%), Query Frame = 0 Query: 67 MVFDFIRKRAEEGIQQVQNIATKTAEGKFAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKA--EKLEPDDVKSVLRLRLIEALSV-QDRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIP-------------GGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLG 426 MVFDF + R +EGI Q+ N+A ++G+ + L D ASY +R + A EGL+KSR R + L+ +F I + + +LE++L+ AD+G AT E I+ +++++ ++ ++L +D+ S++R +++EAL Q R +Q + P N P VLF++GANGMGKTTTIGK+A RL E NQ+VLVAACDTFRA AV QL++W +RA VDI P + PA VL +A+ KA+ YD L+VDTSGRLSNN AL +EL K+KR I R+ P ETLLV+D A GR +D A+VWN+E+G+TGL++TKLDG+ARGG VV++ RD+ +PVKLIGVGEG+ DLRDF P+ FVD LLG Sbjct: 36 MVFDFFKDRTKEGIDQLNNLAKSASQGQLGKGLADVASYTNERNKAFA-------EGLSKSRNRFLDRLEFLF---TGIDPEEMMQELEDILLQADLGIATAEDIVQEVQSLRESSRQRLSREDLMSIMRGKILEALETEQSRMIQFSQDP-----NLPTVLFILGANGMGKTTTIGKLAHRLRIEGNQTVLVAACDTFRAGAVAQLQQWADRAQVDIVGPTDTVKSPAAVLYSALDKAVLEKYDTLLVDTSGRLSNNEALTQELVKMKRVIQKRLSQETNEDGNLVPNMNVPHETLLVIDAAQGRMALDSAQVWNKEIGLTGLILTKLDGSARGGSVVAVSRDLQLPVKLIGVGEGMEDLRDFEPDGFVDGLLG 395
BLAST of NO01G04120 vs. NCBI_GenBank
Match: XP_009040860.1 (hypothetical protein AURANDRAFT_32555 [Aureococcus anophagefferens] >EGB04473.1 hypothetical protein AURANDRAFT_32555 [Aureococcus anophagefferens]) HSP 1 Score: 313.9 bits (803), Expect = 9.300e-82 Identity = 183/371 (49.33%), Postives = 236/371 (63.61%), Query Frame = 0 Query: 95 FAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKAE-KLEPDDVKSVLRLRLIEALS-VQDRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAI----------------------EGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLGYEPEYALALESRLQGM 442 F +A D S+++++ + DA L K GL KSR + DL +IFG + L T++ LE+ L+ ADIGAATT IL+D+RAVA+A + DV ++LR R+ E L+ D AL+ A A P V+ VIGANGMGKTTTIGK+A RL E Q VL+AACDTFRAAAV QL+EW +RA VDI P G P+ A+ A+ G YDVLIVDTSGRLSNN ALNEELKK++RTI R PG P +TLLV+D AVGRN VD A+ W +VG++GL +TKLDGTAR G VVS+V D+G+PVKL+GVGE ++DLRDF+ + F+D+LL + L+ R + Sbjct: 6 FQKASDDFGSFLEQKAKDDALALAKFTAGLEKSRDQFGKDLKAIFGGAAGANLDDTVDALEDALLSADIGAATTTTILEDVRAVAEARGEYAEADVTAILRGRMAETLTKAGDGALRKAPAG-------PTVILVIGANGMGKTTTIGKLARRLRVEGGQRVLLAACDTFRAAAVGQLDEWAKRAAVDIVVPDAGVESPSAACYKALDVALGVAAVDESFRHSDLADDDVDAPAGPYDVLIVDTSGRLSNNAALNEELKKIRRTIDKRAPGAPHDTLLVVDAAVGRNAVDMARAWQADVGVSGLAVTKLDGTARAGFVVSVVEDLGIPVKLVGVGEALDDLRDFDVDAFLDSLLDVDARSVDDLKQRFAAL 369
BLAST of NO01G04120 vs. NCBI_GenBank
Match: XP_005714040.1 (unnamed protein product [Chondrus crispus] >CDF34221.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 292.7 bits (748), Expect = 2.200e-75 Identity = 176/373 (47.18%), Postives = 238/373 (63.81%), Query Frame = 0 Query: 57 RPRRQGHADMMVFDFIRKRAEEGIQQVQNIATKTAEGKFAEALTDTASYVKKRQEIDAENLLKLQEGLAKSRQRLMGDLDSIFGASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAKAEKLEP-DDVKSVLR---LRLIEALSVQDRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGGPQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALLG 426 R R+ + VFDF+R+ +E + ++ + EGK + YV+ + + D + + K+ +GL KSR+RL DL +I L + + +D+G T ++ILDDLRA ++A++LE +D+K+ L+ +R++EA S AL A +P P ++ VIGANGMGKTTTIGK+A+RL Q+ + SVLVAACDTFRAAAVDQLEEW RA VDI P + P+ VL A+ KA EG YD LIVDTSGRL N L EL+K+ R ++ GP ETLLV+D ++GRN V QA W +EVG+T L +TKLDGTAR G VVS V ++ +PVKLIGVGE I+DLRDF+ E FVD L+G Sbjct: 37 RVARRLRTPLAVFDFVRRAGQEQKKALEAL----REGKGID-------YVRDKVKRDIDEVRKVNDGLKKSRERLARDLANIVQGGRIEELEEVXXXXXXXXITSDLGVDTVDKILDDLRAESRAQRLEKREDIKNGLKKSLVRILEAKSNVGVALAKAESP-------PTIIMVIGANGMGKTTTIGKLAARLRQDGS-SVLVAACDTFRAAAVDQLEEWVRRADVDIVVPKPEQKSPSGVLFGAVEKAFEGKYDYLIVDTSGRLHTNANLMGELQKMVRVVSKFKENGPDETLLVVDASIGRNAVAQADTWKKEVGVTALAVTKLDGTARAGFVVSCVDELDIPVKLIGVGESIDDLRDFDAELFVDGLVG 390
BLAST of NO01G04120 vs. NCBI_GenBank
Match: XP_002182288.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46189.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 270.0 bits (689), Expect = 1.500e-68 Identity = 156/306 (50.98%), Postives = 210/306 (68.63%), Query Frame = 0 Query: 124 LAKSRQRLMGDLDSIF-GASEDIGLTQTLNKLEEVLMMADIGAATTEQILDDLRAVAK--AEKLEPDDVKSVLRLRLIEALSVQ-DRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADRIPGG-------------PQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLR 413 LAKSR RL+ +++ +F G S + Q L+ L+++L+ AD+G T E I+ +++++ + + L DD+KS++R +LIEAL+ + A+Q +P V+ P VLFV+GANGMGKTTTIGK+A RL E NQ+VL+AACDTFRA AV+QL++W ERA VD+ P T P+ VL A+ K I YD ++VDTSGRLSNN L ELKK+K+ I R+ P ETLLVLD A GR +D AKVWN E+G++GL++TKLDG+ARGG VV+I RD+ +PVKLIGVGEGI DLR Sbjct: 1 LAKSRNRLLQNIEGLFTGVSPE----QVLDDLQDILLQADLGTKTAEDIVAEVKSLREDSTKMLSKDDLKSIMRGKLIEALNTELSGAIQF--SPLVD--KTPTVLFVMGANGMGKTTTIGKLAHRLRNEGNQTVLLAACDTFRAGAVEQLQQWAERAQVDMVGPSTKVTTPSAVLYAALDKGIAEKYDTILVDTSGRLSNNDQLTAELKKMKKVIQKRLSRENDEEGKPLPNLQVPHETLLVLDAAQGRMALDSAKVWNEEIGLSGLILTKLDGSARGGSVVAISRDIQLPVKLIGVGEGIEDLR 298
BLAST of NO01G04120 vs. NCBI_GenBank
Match: XP_002296627.1 (signal recognition particle alpha, partial [Thalassiosira pseudonana CCMP1335] >EED87323.1 signal recognition particle alpha, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 269.6 bits (688), Expect = 2.000e-68 Identity = 148/289 (51.21%), Postives = 196/289 (67.82%), Query Frame = 0 Query: 151 LNKLEEVLMMADIGAATTEQILDDLRAVAK--AEKLEPDDVKSVLRLRLIEALSVQDRALQLASAPAVEGKNYPKVLFVIGANGMGKTTTIGKIASRLSQEANQSVLVAACDTFRAAAVDQLEEWTERAGVDIHKPGEGETKPAPVLDNAITKAIEGDYDVLIVDTSGRLSNNVALNEELKKLKRTIADR-----------IPGG--PQETLLVLDGAVGRNGVDQAKVWNREVGITGLVITKLDGTARGGVVVSIVRDVGVPVKLIGVGEGINDLRDFNPEDFVDALL 425 L++LE+ L+ AD+G ATT+ +L++ R + + E DD+K++LR +L+EAL P+ + F++GANGMGKTTTIGK+A RL E+ Q VL+AACDTFRA AV QLE+W +RA VD P E P+ VL A+ KAI+ DY+VL+VDTSGRLSNN AL EL K+KR I R IP P ETLLV+D A GR +D AK W++EVG++GL++TKLDG+A+GG VV++ R++G+PVKL+GVGEG+ DLRDF PE FVD LL Sbjct: 10 LDQLEDTLLQADLGMATTDDVLEEARFLREESTEIFSRDDIKALLRGKLLEAL-----------GPSTNNPTPLTIHFIMGANGMGKTTTIGKLAHRLKTESGQKVLLAACDTFRAGAVAQLEQWADRAQVDCFSPNESTNGPSAVLFGALDKAIKEDYNVLLVDTSGRLSNNDALTAELVKMKRVIQKRMSTKFDSAVKPIPNESVPHETLLVIDAAQGRMALDSAKQWDKEVGLSGLILTKLDGSAKGGSVVAVSRELGLPVKLVGVGEGLEDLRDFEPESFVDGLL 287 The following BLAST results are available for this feature:
BLAST of NO01G04120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04120 ID=NO01G04120|Name=NO01G04120|organism=Nannochloropsis oceanica|type=gene|length=3009bpback to top protein sequence of NO01G04120.1 >NO01G04120.1-protein ID=NO01G04120.1-protein|Name=NO01G04120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=526bpback to top Synonyms
Publications
|