NO01G04100, NO01G04100 (gene) Nannochloropsis oceanica

Overview
NameNO01G04100
Unique NameNO01G04100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5346
Alignment locationchr1:1091585..1096930 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1091585..1096930 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019188SNAPc_SNAP43
Homology
The following BLAST results are available for this feature:
BLAST of NO01G04100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007879NSK007879Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04100.1NO01G04100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|577287gene_425Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04100.1NO01G04100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04100 ID=NO01G04100|Name=NO01G04100|organism=Nannochloropsis oceanica|type=gene|length=5346bp
CCTCCCTCCCTGACTCCCTCCTCCTTTCTCTCCCTCCACTCGATTCAACT
CCCTGTTAACTCTCCTAATGTAGCTCCTTTCTGCGTCGATTCTTTCTTTC
ACTGAGATCTCCGCTCCATTGACTCTCGTCAGTGTGGGAACGCGTGCGAT
CAGGAGCTGGCGGGCTTCACCTTGTCCCATCCCTCTGGTGAGAGGGTTCG
AAGCGAAACGCAAGGATGTCAGGGAGGGAAAGTGGGTGAGGGCATCGATG
GAGGACCAGGAGGAGATACGGTTGTAGCTAAGGTGGATGGCTTGGAGATT
TTTGAAGCCGTAGGGAGAGGATGTTGCTGTTGTTGCTGCTGCTGCTCCTC
CTCCTCCTCCTCCTTCTTCGCCCGACCCCACCCCCTCAATCTCATTCTCA
TTCAAACTGAGAATTTTCAACTCCGGCAGGCCCATAAATAATGCTACCTC
CTCCCTCCAGTCCCCCAATCCAGTCCCTGACAAATCCAAACTCTTCAACT
TATGAAACAACGCATGCAATCCCCCTCCTCCCTCCGTCCGTTCTCTCCGT
GCCTCAATCGCCTCCTTCATCTTCTCCCTTCCCCCCTTTTCCCCACCCAA
CCCCTCATTCCTTGCCAGACCCACCTCCTCCAAACACGGCAGACACTCTT
CCAAGTGCATCACCGTTTTCCACCCACTCAACCCACAGTTATTCAACACT
AACACTCTCAAACCCAAGAACGACCTTCTCAGACTCTCCCCCTCCTCGAC
CGGCGCTTGTAACGGGCGCATCAGATTACTATTCAAATGCAATATCTCCA
AGCGTGGCAGTTGTCGAGCGAGTTTCCCCAACTCTTCCCAATCTGACCAC
AAATTACCTTGGACATCCACTTCGACTAGGTGAGATGCCTCCTGCACCTC
TTCCTCCCCCGCCCACGCGACATGCTCCCCCCTCATGGACACTTTGGTCA
ATGTCCCGATCTGTTGCCTGGCCCTAATCTTTTTCTCTCCAAGAAATTCA
ATCGCCTTCTGTCCTCCTTTAGAGGTGTTTGCATAGGCCCCTTCGAACAC
CTGATTTGGTGCTTCCAGAGGGGCATCCGGACCGACGTACCGACGATGCA
ACACCGCCATGAAACTTGTCCCCCTATTCAGCTTATTCGGCTTCAGGAAC
GACGCGCTCGTCAATCCTGGCTTGACACATGTAAAGTGTCTGACAATCTC
CCCCGCGGCCGTCACCACGCTCCCGTCGTGCTTGCCTCGAGTAGAGTCGT
CCCATTCCACCCCCACCCAAGCCGCGGTTGGATCCTTGGCAGAGGCCACA
GGGCCAAGGTACCGCACCGTACCCCGGTTTCCTTCGTCATCCACCACGCG
CTGGCCCAGACAAAAGTCCGGCTGCTGCTCCTCCGTCATAACTGTAGGAG
AGCTGTGTCGTGTGTGTGCGTGGGGTGGGGAGAGTGAAAATGAGGGAAGG
GGGGAGGGGGGGAGGGAGAAAGAGAGGACCGAATTGACATTGTCTGGCTG
AAAGATGACTAAAGATGCGACTTGCCGTCGTACTGCTGCACGGGCATATT
TGAAAGATTTTTTGTGCTGTGTTAATGTGGGGTTGGGGCATCGAAATGTG
AGGAAAAGTGACGGAACATGCAAATCGCGATAGAGTAGAAGCGTTCGGCC
CGTCTCCTTGCTTTTGCCATCTGAAGCTCACATACCCATCAACATCGCGG
CACAATTACCACAGGACAACAATGGCAGAATGCTGGTGGAACTGAAAGAG
TCGCGGGCAGCATCGGCAGTGGCATCGTCGTGAATGCAACGGGAGCATCC
AAGCAATCCGAGACAGACCGCTCGCTAGGTACCATTACCACTTCTCCCTC
TCAATATGTTCAGGCCGTACCGCCCACCCGCTGTGCGTTTTGGCGGCTGC
ACGGAGGATACCTTGTCGCCCGCGGCCATGGTTGACTTCACGgtgagttt
gatagtcttccctcccaccttccccccctcccccgtactctttcactcac
actctcacacacccctaaatccgcagACATGCATCACCACCTTCCTCGCG
TCGGGCCAACTCAGTTTTGCCTCCTTTAAGAACGCCTGGCGGCATGTCGA
CATGGGCATCGTGCACCACTGCGCGCCCGAGCTGACCGATACGAGACTTT
ACACCCAATCGCTCTTTGGGGCTGCCTTGGCCTTACTAGCTCCCACGGCG
TATCTCCCCGGCGGACGCATCCAATTGCCTAACTCCTTGGGATGGAAGAT
AGGAGTGCTTTATTTGCTATATGCACTGTACAAGACTCAACCAAAGGCCG
CCTTGTCCTCTTCTTCCTCTCCGTCCGCCTTCAATACCGGCCACCACAAC
GACGACGACGACGATGGGGAAAACGCAAGCGCAACACTAACACGACGAGA
ACGTATCCGTATCTGTCCATCCAGCTGGAATCGTCTCATGGACCTTGGCG
TCATATTATCGTCAGCCGACCTGGCGGGGATGGGTGACGACGCTCTCTAC
CTATTCCATGCCCTCTTAAAAGACGAGGCATTCATGTTGGCGGCCTACGA
CGGCGCTTTTTCGACGAGCGCTGGGCGGACGACGTATTTGGCATGGGCAG
AGGCGCAACCACGTCTGTCGATCGAACCAGAGTTGAGACTGTTTGAAGAG
CTGTGCTTGAGTCAGTTTCAACAGGAGTGTAAGAGATACAGAGAAGCAGC
CGCAGCAGCAGCCGCAGCAGCTGCCGCAGCAGCAGGAGGAGGGGTGGGGG
TGGTGAGGAAGAAGGGTCTTTCCGGTGAAGAGGCGGTGGCAAAGGGCATA
ATGGAGGGAGCGATGGAAGAGGTGATGAGGAGGGTGTTGGTGGGGGGGGC
GGACAAGTTCGTGCTTCCCCTTGATTTGCTTGATGAGGTGCCCGTGGTGC
CCGCCGTGATGAAGAGCTCGGGAAAAAGTGGAGAAGAAACAGGGGCGGAT
GACGAAGACGATAGAGAGGAAGACAGAGGACACAGAAGGAGGAGGAGATG
GAAAAAGGGGTCGAAGGCGGGTGACGATGGTGAAGGAGGGGAGGAGGTGC
AGCCGCGGGAGTTGGACATGCTTCGGAAAGCTTTGGCTGAAATCCAGCAG
AAACGTGAAGAGGAAAAGGCCTCTCGAGCGGCTGTTGCGGAGGAGGAGGG
GGAGAAGGAGGAAGAAGAGGAAGGAGACGAAGAGGGGGATGACTTGGACG
ATCTGTTCGGAGTTGAAGAGCCTACGTCGGTGGGTGTGAGTGCGTGGATG
GGAGGTAGAAAGGGAGGGAAGGTGGCACTTGATGAGCTGGGTTTGGAGGA
GGAGGAGGAGGAGGAGGAGGAAGAGGAGGACGAGGAGAACCGGGGGCCGC
CCGTGGTCAGCAAGCAAAGGGGGGGGCGAGCAGCAGCCGCAGCGTTAGCG
AAGGGGAAAGGGAAGAGCGCGGTCAAACAAGGCGGAGGAGGGGAAGGGGG
GGGAGAAAAGGGTAAGCGGGCAGCGGCTGAGGACGCGACCGTCGCCGAGC
TTGAGGCTCTGCTCGCTGGTGGTGGTGGTGAGCAGGAGGGAAGAGGCGAG
GAAGGGAAGGAGGATGGGGTGGATCGGTTTGAGAAAGCGATGGCTGTGAG
TGTTCCACAGACGGGAGCGAGAAAAAGGGCCGCAGCGAGGGGTCATTGGA
AGAAAGGAGAAGAGGGGGGGGCTCGGACGGCAGGAAGGGGACGAGGGCGA
GGACGAGGACGAGGACGAGGAGTAGCAGCAGCTACAGGAGCAGGAGGGAG
AGGGAGAGGGAGCGGGAGAGGAAGGGTAGAGACAGGGAGAGAGAGAGCGA
TGGAGTCTTTGGAAGCTTTAGATCAATCGATGGACGACTTGGCGGCCTTG
CTGCAGGAGGAGGTAAGTGGAATGAATGAAGATGGAGGAGGAGGGAAAAG
TATGACGAAACACATAGGAAGTAGTGGTGGTGGAGGAGGAGGAGGAGGGA
ATAATGCAGAGGATGTGATGAGGAATTTTGATGATATGCTGGCGGAGCTG
GAGGGGGTGACGGCCGAGGCTGCAAGCCCCTTACGACTGTCCACTTCTGG
CAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGGCATCGAGGAA
GGGGTCGAAGGCGAGGTGCAATGGCAGCAGCTGCAGCAGCAGCACCGGCG
GCGGCGGAAGGGGCAACGACGAAAAACAGCAGCAGCTCTTCCTCTGTGGG
AGTCAAACGTTGTCGAAAACCGGCAGCTTCGACTGCGAGAAAGGCGGATG
AGAAGGAGCGAGAGGGAGGGAAGGAGGGCGGGGTGGAGGAAGATCTCTTG
GCCTTGCTGGAAGCAGAGACTGTACAGGCAGCGCAAGCCCATGTGGGGGG
ACGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGCGGGCGGGCGG
AGTGGGACGATGAGACTATGGACGTGCTGGCGGCCTTAGAGCTACTGACG
CGGGAGCCGAGGAAGGCAGGAGTTGGAGGTGGAGGAGGAGCAGCAGCAGC
ATCGGCATTGCCACCACCATTATTAGCAGCAGGAAATGGACCAACACGAG
CAAAAGTCGGAATGAATAAAGGAAAAGAATCGACAGTGATAGTGGACAGC
GAGCGTGTTGGAAAGGAAGGAGGGGGAGGTGGAAATGGGAGTATGAAGGG
TAAGGCGAAGCCAGCTAGTAGTGGGGATAAAGGAGCGATGATGTCTGTGC
CTGATCTTTCAAAACCTATGCCTGTTTGTACGGGACGATTTGATGACGTC
GGACCGCATTCACCTTCCGGGGATAAAAACGGAGAGGAGGAGGAAGGGGG
AGAGGAAGTGGCCGGTGCGCTTGCCGGTGGTGGTACTGCATCTGCTGCGG
TTACTACTCATAAGGGAAAGGAGGGGGATGGGAAAGAGGAATCGGCTATA
GAGATTAGCGATGATTTGGCGTTTTTGATGAGCCTGGGGGAGGAGCAAGG
GCGCGAGGAAGGGGTAGGAGGAGGAATGGAGGACGAGGACGATGACCTGG
CCCTGCTGGCGCAGACGAGAGGGGACTCGGAAGGGTCGATAGAAGGGGAG
AGTGATGATGAGGATGAATGAAGAGGAGAAAAGTGAAGATGATGGTATCC
GAAAGCGTTTGGATAAAAATTATTTCACATGTATACTTAGCGACACCAAC
AATGTGAAAAGTGACAAAGAGGACGTCGATGACAACGAAATCAAAAGGAA
AGATAAGGACAGAAATTATGACAATAAATAATACGATAAATTACGAATGA
GGTTTCTGCGTCGAGTTGATACCCTTAAAGTAGATAAAGAGGCATCAATT
TAATTTGTCAAATGGTCGTCTGGTTTTACTCGCCTCTCAGGGAAAA
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protein sequence of NO01G04100.1

>NO01G04100.1-protein ID=NO01G04100.1-protein|Name=NO01G04100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1044bp
MFRPYRPPAVRFGGCTEDTLSPAAMVDFTTCITTFLASGQLSFASFKNAW
RHVDMGIVHHCAPELTDTRLYTQSLFGAALALLAPTAYLPGGRIQLPNSL
GWKIGVLYLLYALYKTQPKAALSSSSSPSAFNTGHHNDDDDDGENASATL
TRRERIRICPSSWNRLMDLGVILSSADLAGMGDDALYLFHALLKDEAFML
AAYDGAFSTSAGRTTYLAWAEAQPRLSIEPELRLFEELCLSQFQQECKRY
REAAAAAAAAAAAAAGGGVGVVRKKGLSGEEAVAKGIMEGAMEEVMRRVL
VGGADKFVLPLDLLDEVPVVPAVMKSSGKSGEETGADDEDDREEDRGHRR
RRRWKKGSKAGDDGEGGEEVQPRELDMLRKALAEIQQKREEEKASRAAVA
EEEGEKEEEEEGDEEGDDLDDLFGVEEPTSVGVSAWMGGRKGGKVALDEL
GLEEEEEEEEEEEDEENRGPPVVSKQRGGRAAAAALAKGKGKSAVKQGGG
GEGGGEKGKRAAAEDATVAELEALLAGGGGEQEGRGEEGKEDGVDRFEKA
MAVSVPQTGARKRAAARGHWKKGEEGGARTAGRGRGRGRGRGRGVAAATG
AGGRGRGSGRGRVETGRERAMESLEALDQSMDDLAALLQEEVSGMNEDGG
GGKSMTKHIGSSGGGGGGGGNNAEDVMRNFDDMLAELEGVTAEAASPLRL
STSGRRGGGGGGGGGGRHRGRGRRRGAMAAAAAAAPAAAEGATTKNSSSS
SSVGVKRCRKPAASTARKADEKEREGGKEGGVEEDLLALLEAETVQAAQA
HVGGRGREGGREGGRAGGRAEWDDETMDVLAALELLTREPRKAGVGGGGG
AAAASALPPPLLAAGNGPTRAKVGMNKGKESTVIVDSERVGKEGGGGGNG
SMKGKAKPASSGDKGAMMSVPDLSKPMPVCTGRFDDVGPHSPSGDKNGEE
EEGGEEVAGALAGGGTASAAVTTHKGKEGDGKEESAIEISDDLAFLMSLG
EEQGREEGVGGGMEDEDDDLALLAQTRGDSEGSIEGESDDEDE*
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Synonyms
Publications