NO01G04090, NO01G04090 (gene) Nannochloropsis oceanica

Overview
NameNO01G04090
Unique NameNO01G04090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1968
Alignment locationchr1:1091006..1092973 -

Link to JBrowse

Properties
Property NameValue
DescriptionTubulin-folding cofactor E
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1091006..1092973 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR036859CAP-Gly_dom_sf
IPR001611Leu-rich_rpt
IPR000938CAP-Gly_domain
Homology
BLAST of NO01G04090 vs. NCBI_GenBank
Match: EWM29341.1 (tubulin-specific chaperone [Nannochloropsis gaditana])

HSP 1 Score: 677.2 bits (1746), Expect = 5.200e-191
Identity = 368/610 (60.33%), Postives = 433/610 (70.98%), Query Frame = 0
Query:    8 DFCLGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFTCVKPGLTSASFLKPNKLNRGTSFMAVLHRRYVGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRGEHVAWAGEEEV-QEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGLPELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAY-LKKEHPRWLSLVQQHGEIASWAVGGEGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERDLRQEARE 616
            DF LGQRV D+EGNRGTVRYLGPVASAKDP AAWVGVEWDD  RGKHDGSVVT AG+I RHF+C+KPG T ASFLKPNKL+RG S MAVLH+RYV PDAPLEAPNQVFE AYANTS+GGQK IEF GE +IRARQQIG L KVS+RGE VAWAGEEEV +EASHLVEVD+QGNLWSDWEELG++ARQ+PRLE LHLNSNLMRPL+ P      LR SF  LRVL+LN+CGLS W TV+H+EEC+P L E+GLARN  LGG+  G      A   RR R+E    +HA F++L+ LDLSGTGL DW +EVA    LP L+ L+LNEN +  + +                     GF+ L+A+ LS N + SWS +DAL   P L SLRFA NPLTRGMGQGEARQLLIAR+  L R+NG+E+S KER DAE+SY+RRV                              L++ +  + LK EHPRW  L++QHGE      G E G       +LA+ M+LV LVSMA GS+T  PVE+K+PG+LTVGQLKLL  +LFKLE  +Q L  K+D +APPS+L  DEE+L Y G TSG  I+MNERDL+QEARE
Sbjct:    9 DFSLGQRVADEEGNRGTVRYLGPVASAKDPEAAWVGVEWDDPGRGKHDGSVVTTAGKIHRHFSCLKPGPTCASFLKPNKLDRGVSLMAVLHKRYVVPDAPLEAPNQVFENAYANTSRGGQKKIEFHGETQIRARQQIGRLEKVSLRGERVAWAGEEEVKEEASHLVEVDLQGNLWSDWEELGRMARQMPRLENLHLNSNLMRPLETPAT--PELRGSFQALRVLILNSCGLSSWATVLHVEECVPGLVELGLARN-ALGGQDLG-----TAWARRRARSE----IHAPFYRLQRLDLSGTGLRDWEDEVAFLKTLPSLRALNLNENLLVEIPA--------GTVQTHGATHSALGFQALEALDLSCNLVESWSCLDALNLLPRLHSLRFAGNPLTRGMGQGEARQLLIARMGALRRLNGSEVSTKERADAEKSYLRRVAREWGRRRGSGDGQGEGAN--------EVMLSEEECIHQLKLEHPRWWPLMEQHGESVGGGNGVERGDGASGLGSLAREMVLVRLVSMAPGSITQGPVERKLPGSLTVGQLKLLCQRLFKLEAAMQTLSLKADPQAPPSLLGTDEEALAYCGATSGCEIFMNERDLKQEARE 590          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: CBJ33103.1 (putative: beta-tubulin folding cofactor E [Ectocarpus siliculosus])

HSP 1 Score: 372.5 bits (955), Expect = 2.700e-99
Identity = 253/678 (37.32%), Postives = 343/678 (50.59%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFTCVKPGLTSASFLKPNKLNRGTSFMAVLHRRYVGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRGEHVAWAGE--EEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLG-LRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGLPELKILSLNENEIEGV-------------------------------GSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAY-LKKEHPRWLSLVQQHGEIASWAVGGEGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIP-GTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERDLRQEAREDESRREAERXXXXXXXXXXXRLDRLKRAQIGLEKQGA 653
            +G RVVD  G R TVRY+GPV +AK+PT  W+GVE+DD  RGKHDG+V    G  +R+FTCV  G  S SFLKP K + G S    L ++YV  +APL AP  +   AYA+TSKGG+KAIEF GE KIR RQQ+ TL   ++R   ++ AGE     + A   V VD++ NL SDW+E+G +A Q   LEIL + SN+ +    P     SL       LRVL + +CG++ W  V  L E  P LEE+  A N     +      +  +        +G GG    F +L +LDLS T L  W ++VA F  LP L  L LN N +  V                               G                       F  L AI LS NRI  W ++D L   PSL SLRF+ NP+T G+G  E+R   IAR+P +TRVN +E+  +ER DAE+ Y+R +                              LT+ +A   L + HPR+  L   HG+  S A GG G        ++A GM+ VTL+S+A+ S T+ PV+KK+P  +LTVG+LK L  +LFKL+   QVL ++ +  A  S LD+DE++L YF +  GS + +NE D RQ+ R+ E                   L  L+R Q+  +   A
Sbjct:   15 IGGRVVDGNGFRATVRYVGPVCTAKEPTTPWIGVEFDDPARGKHDGAVEKPDGSSLRYFTCVNGG--SGSFLKPGKFSTGISMAEALRQQYVDMNAPLLAPENLLPDAYASTSKGGKKAIEFYGESKIRRRQQVDTLDHCTLRECSISKAGELPALAEAAGAFVNVDLKANLLSDWQEVGLIASQTKLLEILSVGSNMFK---TPDGVPPSLSSGACDRLRVLEITSCGITSWSQVAMLGEWAPSLEELYAADNN--VSDVTAVVALPTSGNGHPSGEKGVGG----FRRLIALDLSETELTSW-DQVACFSALPALSTLLLNHNRVTDVDLIVXXXXXXXXXXXXXXGTNPGPVSGDQVEGDAGGKHCHNDGKGGAASSGIAPPFAALSAISLSGNRIGDWGAVDRLAGLPSLRSLRFSGNPVTSGLGASESRAACIARLPKVTRVNASEVGARERADAEKLYLRVLYKDLEKAQESEDKG-------------GQGLTKGEAEQRLAERHPRYRELWALHGD--SMAFGGRGAGLGQQGGSMAAGMVQVTLISLAAVSCTVEPVKKKLPASSLTVGKLKQLCKRLFKLDTDQQVLSHRPEPGALLSTLDDDEKTLSYFCVGDGSEVLVNEIDERQQERDKEXXXXXXXGRLAEQLRHADALTALRRGQVAQDTASA 665          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: XP_002291399.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91506.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 294.7 bits (753), Expect = 7.300e-76
Identity = 200/614 (32.57%), Postives = 308/614 (50.16%), Query Frame = 0
Query:   14 RVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVV-TAAGEIVRHFTCVKPGLTSASFLKPNKLNRGTSFMAVLHR-RYVGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRGEHVAWAGEEEVQ----EASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGLPELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGGEGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERDLRQEAREDESRRE 622
            RV D  G  GTV Y+GPVASAK  +  + G+ WDD TRGKHDGSV+     ++VRHF C   G T  SFL+ +K++ G +    L R RYV P A L AP+ +     A T+ G  KAIEF GE KIR RQQ+  + ++S+R   ++    +E+Q    E  HL  +D+ GNL SDWE++  + RQ P+L+ + + SN +  L +    GE     F  +R L LNNC +S ++T+  + + +P LEE+ +A  +               +    + T     +  LF  L  LDLS   L  W   +  F  LP L+ L LN N I+ +                        F +L ++ ++ N + SW+++D L    SL SLR  S PLT  +G GE R   IAR P+L   N + IS +ER +AER Y+  V                             +    K A +   HPR+  L+ +H +          G        + + ++ VT+ SMA+ S  + P++K++P +L VG++K + ++ F L++ LQ+L+++ +    P+ LD+ + SL Y+G+T G+ I +NE D+  + RE   + E
Sbjct:   13 RVRDPSGFIGTVLYVGPVASAKSTSEIYAGISWDDVTRGKHDGSVICRTTNQLVRHFKC---GPTQGSFLRLSKVDVGVALSPELMRSRYVKPGAELVAPDNILPHV-ARTAGGRDKAIEFWGEIKIRNRQQLEVVEEISLRMLGISGPCSKELQFEMEEFGHLRGIDLAGNLLSDWEDVLTILRQFPKLQNVSVASNRINDLGSTSSIGE-----FPHIRSLNLNNCNISSFQTLRLIGKAMPNLEELCVAHAD---------------LSDIEQHTPDTDTIEELFPNLILLDLSDCKLTSWENHIQPFRNLPMLESLILNLNAIDSI-------------VVPESDNTRAPFPSLASLQIAGNPLPSWTALDDLNSITSLRSLRLRSTPLTNLLGVGEVRSTAIARFPSLEFFNASPISERERNEAERRYVSTVARELLLISSGALLSTNNNGLGTVDSS-GDSEVDAKQAEVFARHPRFKHLMTKHKDTMMALNSSAAGTDSSGSGKIGEDVINVTIRSMAASSCDVEPLQKRLPRSLQVGRIKAMCARAFGLDIDLQILHFRIEGDPFPTELDDADHSLVYYGVTDGAEILVNEVDVEAQKRERARQEE 588          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: OEU15152.1 (L domain-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 290.4 bits (742), Expect = 1.400e-74
Identity = 196/617 (31.77%), Postives = 316/617 (51.22%), Query Frame = 0
Query:   14 RVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVV-TAAGEIVRHFTCVKPGLTSASFLKPNKLNRGTSFMAVLHR-RYVGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRGEHVAWAG--EEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGLPELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGGEGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDAR-APPSVLDEDEESLGYFGLTSGSVIYMNERDLRQEAREDESR-REAER 625
            R+ D +G  GTV Y G VAS+K+PT  + G+ WDD +RGKHDGSV+     +IVRHF C   G T  SFL+  KL+ G +    L R +YV  +AP+ APN +   + A TS G +K+IEFLGE +IR  QQ+  + K+S+R E ++     ++++ E  H+ E+D+ GNL+ DWE++ K+  +   LEI  L  N +R     ++EG  +   F  +++L LNNC +  + TV  + E +P LE + +A ++                 +  E+ E   G    F KL+ LD S  GL  W+ +V+ F  LP L+ LS++EN I                           F  L ++ +S+  +S+W  ++ +  F SL  LRF S PLT  +GQGE R + IAR P +  +N + IS KER +AER Y+  +                                 +    +  ++PR+L L ++H  +  ++  G           LA  +  +T+ SMA+ S T+ P+ +++PGTL V ++K L S+++ ++  L  L + +D     P  +D+D ++L Y+GL  G+ I ++E D    A + ++  +E E+
Sbjct:   25 RIRDTDGFVGTVVYTGSVASSKNPTEVYAGIVWDDHSRGKHDGSVICRKTNQIVRHFAC---GPTQGSFLRLRKLDLGVTLTTTLLRDKYVKMNAPIIAPNNLLPHS-AKTSSGREKSIEFLGELQIRKHQQLENIVKISLRREGISKVSDDDDDMAEFQHIKEIDLAGNLFCDWEQVFKIIHKFSCLEIFSLAHNYIR----DIDEG-IVHLQFDKMKILNLNNCSIQSFGTVSRIAEMMPNLESLCVANSD----------------ISDIEKYEINNG----FQKLRQLDCSRCGLDRWQNQVSKFATLPLLESLSIDENPI---------------LCIPLNAGMRLSFPRLLSLQISHTALSTWLDLEGINSFVSLKGLRFNSIPLTENLGQGEVRSISIARFPHIDYLNASRISQKERNEAERRYVTLISYSLKKCNTLVEQNENGNDLGGEC---------SNRMKILHDNPRYLELAEKHKNLIIFSNNG-----MDRNENLATSIYNITIKSMAASSCTMDPIVRRLPGTLNVERMKALCSRIYDIDYDLICLRFITDKEDGLPVEMDDDCKTLDYYGLCDGAEILVDEIDFHARALDTKNNDKELEK 583          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: OQR97361.1 (tubulin-specific chaperone E [Achlya hypogyna])

HSP 1 Score: 259.2 bits (661), Expect = 3.400e-65
Identity = 191/611 (31.26%), Postives = 289/611 (47.30%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPT-------------AAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFTCVKPGLTSASFLKPNKLNRGTSFMAVLHRRYVGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRGEHVAW--AGEEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGLPELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGGEGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNE 607
            +G RV D +G RGTVRY+G + S  D                  +G+EWDDS+RGKH G     A   V++F    P  T+ +F+ P K++RG   +  LH RY+  +A     + V       T+ G  K+I+ +G  KI+ +Q IG + KVS+ G  VA      E    A ++ E+D+  NL + W E+  LA  LP+LE L L+ N ++   A  + G     +F  +  LVLN    S W  ++ +    P L E+ +A N+             + IE     T            L+ +D+S   +GDW        GLP L+ L    N +  +                        F +L+++ L  NRI+SW+S+DAL  FP+LT LRFA NPL  G+G GEAR +++AR   L   NG+EI  KER DAE+ Y++R+                          VA+         +   HPR++ L+ ++ +I   A    G         LA+ ++ VT V M+S + T+ P+ KK+P  +TVGQLK L  K + LE     L +++ A+  P  LD+D   +GY+GL  G+ I +N+
Sbjct:    4 IGDRVEDADGFRGTVRYVGSIQSKGDQVYWGTSVPPRCGGDCQRLGIEWDDSSRGKHGG-----AANGVQYFVTRAP--TAGTFVAPEKVSRGRGLLPALHERYMQAEA-----SDVRVAGEVATAGGSSKSIQLVGVHKIQEKQHIGVICKVSLEGCQVATLPTPAELAAVAPNIQELDLGFNLLASWAEVLSLATALPKLEQLVLSGNRLQ-YDATADAG-----AFPLVTRLVLNQTATS-WTDLLRICVHFPALRELHVAANDLADA---------DLIEGVWPET------------LELVDVSHNSIGDWAAVQRALGGLPALRHLVATHNALGAIAPSAAG-----------------SFASLESLALGDNRIASWASMDALNSFPALTLLRFAKNPLVAGLGAGEARMMVVARCGRLLAFNGSEIRAKERTDAEQMYLKRI-----------------------IHEVASFKDDADKHKVLASHPRYIDLLAKYPDIQKPATTTGG------PAALARSLVAVTFVPMSSQAATMEPMAKKLPLNMTVGQLKTLVGKKYGLEPAALQLSFRATAKEMPVPLDDDSGDVGYYGLQDGAEILVND 528          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: ETP22994.1 (hypothetical protein F441_03801 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 256.1 bits (653), Expect = 2.900e-64
Identity = 193/617 (31.28%), Postives = 289/617 (46.84%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFT---CVK------PGLTSASFLKP---NKLNRGTSFMAVLHRRY----VGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRG-EHVAWAGEEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGL-PELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGG-EGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERD 609
            +G RV D  G+ GT+RY+GPVA+AKD +A + G+EWDD  RGK+DGSV   +GE V HF+   C K      P     SF K    +K    +S +  L  RY                V       T+ G +K IEF+G KK+  +Q + T+ K+S+ G + V   G+   Q A HL E+D+  NL+S W ++  + R+LP LE L L+ N     +     GE    +F  L+VLVLN   LS   T   +    P LE++ L  NE             E  +    +T GG         L  LDLS   L  W + + +  G+   L  L LN N I                        P  F+ L+ + LS N I SW+SIDAL  FP + +LRF+ NPLT  M  GE R L++AR   +   N + +  KER +AE+ Y++R+                                +++   +   HPR+  L + + EI+    G   G         LA  ++ V+++ M+  + +  P+ KKIP  + V QLKLL    F ++V  QVL +++D+R+ P +LD+D   + Y+G+  GS + +N+ +
Sbjct:    8 VGDRVDDGSGSLGTIRYIGPVATAKDASALYYGIEWDDWGRGKNDGSVELPSGERVVHFSGPPCRKLSGHGSPVSYKCSFAKATVFDKTAERSSLLQRLQERYSNEXXXXXXXXXXXXXVVVAGEVGTTLGSEKPIEFVGAKKLSTQQTLQTIEKISLSGCQIVELGGQGLGQLAPHLTELDLSRNLFSKWSDVLAIIRELPLLETLILSGNRFTVDEENDNNGE---ENFENLKVLVLNQTLLSWRNTGTIITRHFPKLEQLHLVDNE------------YEDDQLTEFKTTGG-----WVETLSVLDLSLNRLKSWTKVLEIIGGMFVNLSQLFLNGNRI----------------VTLVTDAKPIAFQKLKTLSLSENLIDSWTSIDALNAFPLMDTLRFSKNPLTTQMSLGETRMLVVARTDHIAVFNASPVREKERKEAEQLYLKRI----------------------LHELAVIGDDKSEHERVLAAHPRFTRLRELYPEISIDQSGNTAGSGSTAGPRKLASSLLKVSIIPMSMQATSFDPLVKKIPQQMKVSQLKLLIETKFGVQVPAQVLSFRTDSRSMPMLLDDDNAEVSYYGMQDGSEVLVNDNE 566          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: POM66785.1 (Tubulin-specific chaperone E [Phytophthora palmivora var. palmivora])

HSP 1 Score: 256.1 bits (653), Expect = 2.900e-64
Identity = 192/612 (31.37%), Postives = 291/612 (47.55%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHF--TCVK-------PGLTSASFLKPNKLNRGTSFMAVLHRRYVGPDAPLEA-PNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRGEHVAWAGEEEVQE-ASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHL-EECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGL-PELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGGEGG-XXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERD 609
            +G RV D  G+ GT+RY+GPVA++KD +  + G+EWD   RGK+DGSV    GE V HF   C +       P     SF+K    ++ +S +  L  RY   +  + +    V       T+ G +K IEF+G KK+R +Q + T+ K+S+ G  +   G + ++  A +L E+D+  NL+S W ++  + R+LP LE L L+ N         E G+     F  L+VLVLN   L  W+ V  L     P LE++ L  NE   GE    +     +E                  L  LDLS   L  W + + +  G+   L  L LN N I  +G                      GF+ L  + LS N I SW+SIDAL  FP L +LR +  PLT  M  GEAR L++AR   +   N + I  KER +AE+ Y++R+                                +++   +   HPR+  L + + EI+    G  GG         LA  ++ V+++ M+  + +L P+ KKIP  + V QLKLL    F +EV  QVL ++SD+R+ P +LD+D   + Y+G+  GS + +N+ +
Sbjct:    6 IGDRVDDGSGSLGTIRYVGPVATSKDASTLYYGIEWDAWGRGKNDGSVELPNGERVVHFEGPCGRQLTGHGNPMSFKCSFVKHTVFDKTSSLLEKLQERYSNQEGTMSSGTKDVMVTGEVGTTLGSEKPIEFVGAKKLRTQQTLQTIEKISLSGCQIDRLGGDGLRTLAPNLTELDLSRNLFSTWSDILDVVRELPLLETLILSGNRF----TVDESGDG--EVFENLKVLVLNQT-LVSWENVGKLVSRHFPKLEQLHLVDNEYENGELTVYQNTASWMET-----------------LSVLDLSLNRLSSWEKVLQVVGGMFANLSQLFLNGNRIVTLGVDNEELVT--------------GFQKLTTLSLSENLIDSWTSIDALNAFPLLDTLRLSKIPLTTQMSLGEARMLVVARTDRIAVFNASPIREKERKEAEQLYLKRI----------------------LHELAVIGDNESERECVLAGHPRFNRLRELYPEISIDQCGSAGGSGSTTGPRKLASSLIKVSIIPMSMQATSLEPLVKKIPQQMKVSQLKLLVETKFGVEVPAQVLSFRSDSRSMPMLLDDDNAEVSYYGMQEGSEVLVNDNE 557          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: XP_008901026.1 (hypothetical protein PPTG_08652 [Phytophthora parasitica INRA-310] >ETN13989.1 hypothetical protein PPTG_08652 [Phytophthora parasitica INRA-310])

HSP 1 Score: 255.8 bits (652), Expect = 3.700e-64
Identity = 192/617 (31.12%), Postives = 287/617 (46.52%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFTCV---------KPGLTSASFLKP---NKLNRGTSFMAVLHRRY----VGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRG-EHVAWAGEEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGL-PELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGG-EGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERD 609
            +G RV D  G+ GT+RY+GPVA+AKD +A + G+EWDD  RGK+DGSV   +GE V HF+            P     SF K    +K    +S +  L  RY                V       T+ G +K IEF+G KK+  +Q + T+ K+S+ G + V   G+   Q A HL E+D+  NL+S W ++  + R+LP LE L L+ N     +     GE    +F  L+VLVLN   LS   T   +    P LE++ L  NE             E  +    +T GG         L  LDLS   L  W + + +  G+   L  L LN N I                        P  F+ L+ + LS N I SW+SIDAL  FP + +LRF+ NPLT  M  GE R L++AR   +   N + +  KER +AE+ Y++R+                                +T+   +   HPR+  L + + EI+    G   G         LA  ++ V+++ M+  + +  P+ KKIP  + V QLKLL    F ++V  QVL +++D+R+ P +LD+D   + Y+G+  GS + +N+ +
Sbjct:    8 VGDRVDDGSGSLGTIRYIGPVATAKDASALYYGIEWDDWGRGKNDGSVELPSGERVVHFSGPPGRKLSGHGSPVSYKCSFAKATVFDKTAERSSLLQRLQERYSNEXXXXXXXXXXXXXVVVAGEVGTTLGSEKPIEFVGAKKLSTQQTLQTIEKISLSGCQIVELGGQGLGQLAPHLTELDLSRNLFSKWSDVLAIIRELPLLETLILSGNRFTVDEENDNNGE---ENFENLKVLVLNQTLLSWRNTGTIITRHFPKLEQLHLVDNE------------YEDDQLTEFKTTGG-----WVETLSVLDLSLNRLKSWTKVLEIIGGMFVNLSQLFLNGNRI----------------VTLVTDAKPIAFQKLKTLSLSENLIDSWTSIDALNAFPLMDTLRFSKNPLTTQMSLGETRMLVVARTDHIAVFNASPVREKERKEAEQLYLKRI----------------------LHELAVIGDDKTEHERVLAAHPRFTRLRELYPEISIDQSGNTAGSGSTAGPRKLASSLLKVSIIPMSMQATSFDPLVKKIPQQMKVSQLKLLIETKFGVQVPAQVLSFRTDSRSMPMLLDDDNAEVSYYGMQDGSEVLVNDNE 566          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: KUF91814.1 (hypothetical protein AM588_10004930 [Phytophthora nicotianae])

HSP 1 Score: 255.8 bits (652), Expect = 3.700e-64
Identity = 192/617 (31.12%), Postives = 287/617 (46.52%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFTCV---------KPGLTSASFLKP---NKLNRGTSFMAVLHRRY----VGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRG-EHVAWAGEEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGL-PELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGG-EGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERD 609
            +G RV D  G+ GT+RY+GPVA+AKD +A + G+EWDD  RGK+DGSV   +GE V HF+            P     SF K    +K    +S +  L  RY                V       T+ G +K IEF+G KK+  +Q + T+ K+S+ G + V   G+   Q A HL E+D+  NL+S W ++  + R+LP LE L L+ N     +     GE    +F  L+VLVLN   LS   T   +    P LE++ L  NE             E  +    +T GG         L  LDLS   L  W + + +  G+   L  L LN N I                        P  F+ L+ + LS N I SW+SIDAL  FP + +LRF+ NPLT  M  GE R L++AR   +   N + +  KER +AE+ Y++R+                                +T+   +   HPR+  L + + EI+    G   G         LA  ++ V+++ M+  + +  P+ KKIP  + V QLKLL    F ++V  QVL +++D+R+ P +LD+D   + Y+G+  GS + +N+ +
Sbjct:    8 VGDRVDDGSGSLGTIRYIGPVATAKDASALYYGIEWDDWGRGKNDGSVELPSGERVVHFSGPPGRKLSGHGSPVSYKCSFAKATVFDKTAERSSLLQRLQERYSNEXXXXXXXXXXXXXVVVAGEVGTTLGSEKPIEFVGAKKLSTQQTLQTIEKISLSGCQIVELGGQGLGQLAPHLTELDLSRNLFSKWSDVLAIIRELPLLETLILSGNRFTVDEENDNNGE---ENFENLKVLVLNQTLLSWRNTGTIITRHFPKLEQLHLVDNE------------YEDDQLTEFKTTGG-----WVETLSVLDLSLNRLKSWTKVLEIIGGMFVNLSQLFLNGNRI----------------VTLVTDAKPIAFQKLKTLSLSENLIDSWTSIDALNAFPLMDTLRFSKNPLTTQMSLGETRMLVVARTDHIAVFNASPVREKERKEAEQLYLKRI----------------------LHELAVIGDDKTEHERVLAAHPRFTRLRELYPEISIDQSGNTAGSGSTAGPRKLASSLLKVSIIPMSMQATSFDPLVKKIPQQMKVSQLKLLIETKFGVQVPAQVLSFRTDSRSMPMLLDDDNAEVSYYGMQDGSEVLVNDNE 566          
BLAST of NO01G04090 vs. NCBI_GenBank
Match: ETI53180.1 (hypothetical protein F443_03823 [Phytophthora parasitica P1569])

HSP 1 Score: 253.8 bits (647), Expect = 1.400e-63
Identity = 191/617 (30.96%), Postives = 286/617 (46.35%), Query Frame = 0
Query:   11 LGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDSTRGKHDGSVVTAAGEIVRHFTCV---------KPGLTSASFLKP---NKLNRGTSFMAVLHRRY----VGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKVSMRG-EHVAWAGEEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEILHLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECLPCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKSLDLSGTGLGDWREEVALFMGL-PELKILSLNENEIEGVGSXXXXXXXXXXXXXXXXXXXPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPLTRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVXXXXXXXXXXXXXXXXXXXXXXXXXXVATNLTQTKAAYLKKEHPRWLSLVQQHGEIASWAVGG-EGGXXXXXXXTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLTVGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGSVIYMNERD 609
            +G RV D  G+ GT+RY+GPVA+AKD +A + G+EWDD  RGK+DGSV   +GE V HF+            P     SF K    +K    +S +  L  RY                        T+ G +K IEF+G KK+  +Q + T+ K+S+ G + V   G+   Q A HL E+D+  NL+S W ++  + R+LP LE L L+ N     +     GE    +F  L+VLVLN   LS   T   +    P LE++ L  NE             E  +    +T GG         L  LDLS   L  W + + +  G+   L  L LN N I                        P  F+ L+ + LS N I SW+SIDAL  FP + +LRF+ NPLT  M  GE R L++AR   +   N + +  KER +AE+ Y++R+                                +T+   +   HPR+  L + + EI+    G   G         LA  ++ V+++ M+  + +  P+ KKIP  + V QLKLL    F ++V  QVL +++D+R+ P +LD+D   + Y+G+  GS + +N+ +
Sbjct:    8 VGDRVDDGSGSLGTIRYIGPVATAKDASALYYGIEWDDWGRGKNDGSVELPSGERVVHFSGPPGRKLSGHGSPVSYKCSFAKATVFDKTAERSSLLQRLQERYSNXXXXXXXXXXXXXXXXXXGEVGTTLGSEKPIEFVGAKKLSTQQTLQTIEKISLSGCQIVELGGQGLGQLAPHLTELDLSRNLFSKWSDVLAIIRELPLLETLILSGNRFTVDEENDNNGE---ENFENLKVLVLNQTLLSWRNTGTIITRHFPKLEQLHLVDNE------------YEDDQLTEFKTTGG-----WVETLSVLDLSLNRLKSWTKVLEIIGGMFVNLSQLFLNGNRI----------------VTLVTDAKPIAFQKLKTLSLSENLIDSWTSIDALNAFPLMDTLRFSKNPLTTQMSLGETRMLVVARTDHIAVFNASPVREKERKEAEQLYLKRI----------------------LHELAVIGDDKTEHERVLAAHPRFTRLRELYPEISIDQSGNTAGSGSTAGPRKLASSLLKVSIIPMSMQATSFDPLVKKIPQQMKVSQLKLLIETKFGVQVPAQVLSFRTDSRSMPMLLDDDNAEVSYYGMQDGSEVLVNDNE 566          
The following BLAST results are available for this feature:
BLAST of NO01G04090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29341.15.200e-19160.33tubulin-specific chaperone [Nannochloropsis gadita... [more]
CBJ33103.12.700e-9937.32putative: beta-tubulin folding cofactor E [Ectocar... [more]
XP_002291399.17.300e-7632.57predicted protein [Thalassiosira pseudonana CCMP13... [more]
OEU15152.11.400e-7431.77L domain-like protein [Fragilariopsis cylindrus CC... [more]
OQR97361.13.400e-6531.26tubulin-specific chaperone E [Achlya hypogyna][more]
ETP22994.12.900e-6431.28hypothetical protein F441_03801 [Phytophthora para... [more]
POM66785.12.900e-6431.37Tubulin-specific chaperone E [Phytophthora palmivo... [more]
XP_008901026.13.700e-6431.12hypothetical protein PPTG_08652 [Phytophthora para... [more]
KUF91814.13.700e-6431.12hypothetical protein AM588_10004930 [Phytophthora ... [more]
ETI53180.11.400e-6330.96hypothetical protein F443_03823 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007881NSK007881Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04090.1NO01G04090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|551121gene_423Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100205g14gene1286Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04090.1NO01G04090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04090 ID=NO01G04090|Name=NO01G04090|organism=Nannochloropsis oceanica|type=gene|length=1968bp
ATGACGGAGGAGCAGCAGCCGGACTTTTGTCTGGGCCAGCGCGTGGTGGA
TGACGAAGGAAACCGGGGTACGGTGCGGTACCTTGGCCCTGTGGCCTCTG
CCAAGGATCCAACCGCGGCTTGGGTGGGGGTGGAATGGGACGACTCTACT
CGAGGCAAGCACGACGGGAGCGTGGTGACGGCCGCGGGGGAGATTGTCAG
ACACTTTACATGTGTCAAGCCAGGATTGACGAGCGCGTCGTTCCTGAAGC
CGAATAAGCTGAATAGGGGGACAAGTTTCATGGCGGTGTTGCATCGTCGG
TACGTCGGTCCGGATGCCCCTCTGGAAGCACCAAATCAGGTGTTCGAAGG
GGCCTATGCAAACACCTCTAAAGGAGGACAGAAGGCGATTGAATTTCTTG
GAGAGAAAAAGATTAGGGCCAGGCAACAGATCGGGACATTGACCAAAGTG
TCCATGAGGGGGGAGCATGTCGCGTGGGCGGGGGAGGAAGAGGTGCAGGA
GGCATCTCACCTAGTCGAAGTGGATGTCCAAGGTAATTTGTGGTCAGATT
GGGAAGAGTTGGGGAAACTCGCTCGACAACTGCCACGCTTGGAGATATTG
CATTTGAATAGTAATCTGATGCGCCCGTTACAAGCGCCGGTCGAGGAGGG
GGAGAGTCTGAGAAGGTCGTTCTTGGGTTTGAGAGTGTTAGTGTTGAATA
ACTGTGGGTTGAGTGGGTGGAAAACGGTGATGCACTTGGAAGAGTGTCTG
CCGTGTTTGGAGGAGGTGGGTCTGGCAAGGAATGAGGGGTTGGGTGGGGA
AAAGGGGGGAAGGGAGAAGATGAAGGAGGCGATTGAGGCACGGAGAGAAC
GGACGGAGGGAGGAGGGGGATTGCATGCGTTGTTTCATAAGTTGAAGAGT
TTGGATTTGTCAGGGACTGGATTGGGGGACTGGAGGGAGGAGGTAGCATT
ATTTATGGGCCTGCCGGAGTTGAAAATTCTCAGTTTGAATGAGAATGAGA
TTGAGGGGGTGGGGTCGGGCGAAGAAGGAGGAGGAGGAGGAGGAGCAGCA
GCAGCAACAACAGCAACATCCTCTCCCTACGGCTTCAAAAATCTCCAAGC
CATCCACCTTAGCTACAACCGTATCTCCTCCTGGTCCTCCATCGATGCCC
TCACCCACTTTCCCTCCCTGACATCCTTGCGTTTCGCTTCGAACCCTCTC
ACCAGAGGGATGGGACAAGGTGAAGCCCGCCAGCTCCTGATCGCACGCGT
TCCCACACTGACGAGAGTCAATGGAGCGGAGATCTCAGTGAAAGAAAGAA
TCGACGCAGAAAGGAGCTACATTAGGAGAGTTAACAGGGAGTTGAATCGA
GTGGAGGGAGAGAAAGGAGGAGGGAGTCAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAAGAGTGGCTACAAACTTGACACAGACGAAAGCAGCATATTTGA
AAAAAGAGCACCCGCGATGGTTATCACTGGTGCAACAACACGGTGAAATT
GCGAGTTGGGCAGTGGGAGGGGAGGGCGGAGGGGCAGGGGTAGGAACAGG
GACATTGGCAAAGGGGATGATGTTGGTAACGTTAGTGAGCATGGCGTCGG
GGTCCATGACCTTGCCTCCGGTGGAGAAAAAAATCCCGGGGACTCTAACG
GTCGGGCAGTTGAAGTTACTGTTTAGTAAGTTGTTCAAGTTGGAGGTGGG
GTTGCAGGTGTTGTACTACAAGAGCGATGCGAGGGCCCCCCCCAGCGTGC
TGGATGAGGACGAGGAGAGCTTGGGGTATTTCGGCTTGACAAGTGGAAGT
GTGATTTATATGAATGAACGGGACTTGAGGCAGGAGGCGAGGGAGGATGA
AAGCCGCAGGGAGGCGGAGAGGGAGAGGATGGAGGCACAGTTGGAGCAGG
TGGAAAGATTAGACCGATTGAAACGGGCACAGATTGGCTTGGAGAAGCAG
GGCGCAGCGGCTCGTTAG
back to top

protein sequence of NO01G04090.1

>NO01G04090.1-protein ID=NO01G04090.1-protein|Name=NO01G04090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=656bp
MTEEQQPDFCLGQRVVDDEGNRGTVRYLGPVASAKDPTAAWVGVEWDDST
RGKHDGSVVTAAGEIVRHFTCVKPGLTSASFLKPNKLNRGTSFMAVLHRR
YVGPDAPLEAPNQVFEGAYANTSKGGQKAIEFLGEKKIRARQQIGTLTKV
SMRGEHVAWAGEEEVQEASHLVEVDVQGNLWSDWEELGKLARQLPRLEIL
HLNSNLMRPLQAPVEEGESLRRSFLGLRVLVLNNCGLSGWKTVMHLEECL
PCLEEVGLARNEGLGGEKGGREKMKEAIEARRERTEGGGGLHALFHKLKS
LDLSGTGLGDWREEVALFMGLPELKILSLNENEIEGVGSGEEGGGGGGAA
AATTATSSPYGFKNLQAIHLSYNRISSWSSIDALTHFPSLTSLRFASNPL
TRGMGQGEARQLLIARVPTLTRVNGAEISVKERIDAERSYIRRVNRELNR
VEGEKGGGSQGGREGGREGRVATNLTQTKAAYLKKEHPRWLSLVQQHGEI
ASWAVGGEGGGAGVGTGTLAKGMMLVTLVSMASGSMTLPPVEKKIPGTLT
VGQLKLLFSKLFKLEVGLQVLYYKSDARAPPSVLDEDEESLGYFGLTSGS
VIYMNERDLRQEAREDESRREAERERMEAQLEQVERLDRLKRAQIGLEKQ
GAAAR*
back to top
Synonyms
Publications