NO01G04070, NO01G04070 (gene) Nannochloropsis oceanica

Overview
NameNO01G04070
Unique NameNO01G04070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1956
Alignment locationchr1:1087522..1089477 +

Link to JBrowse

Properties
Property NameValue
DescriptionCaib baif-transferase family protein c7orf10-like isoform 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1087522..1089477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR023606CoA-Trfase_III_dom
IPR003673CoA-Trfase_fam_III
Homology
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_005041431.1 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase isoform X2 [Ficedula albicollis])

HSP 1 Score: 437.6 bits (1124), Expect = 4.700e-119
Identity = 209/398 (52.51%), Postives = 283/398 (71.11%), Query Frame = 0
Query:   45 PLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            PL G+++LDLTRVLAGPFATM LGDLGA+VIK+E P  GDDTRAWGPPF G ES YFLSVNRNK+S+ ++ K S+G+++++ LA+ SDV +ENF+PGKL   GLGY+ + ++ P ++YCSITG+G  G   QR GYD I   + GLM ITG    + GEP + GVAM DLATGL+ +GAI+A L  R++TGRG  IDC+L+ TQ+ACL ++  N+ L    EAKRWGTAH SIVPYQAFK KDG  ++GAGND QF  +   + +PE+S+DPR++TN  R ++RK LI++L T FS K  +E   +F+   G+PYGP+ N+ + F D Q  H  +V+++ HPT G++ + G  V+YS    S  + PPL+GQHT E+L+  LGY  D ++ L +   V
Sbjct:   17 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRAWGPPFAGTESVYFLSVNRNKKSIAINMKDSKGVKLIKELAAASDVFVENFVPGKLAGMGLGYEDIKKIAPHIVYCSITGYGQTGPVVQRGGYDSIAAAVSGLMHITG---HKDGEPVRPGVAMTDLATGLYTYGAIMAGLLQRYKTGRGLHIDCNLLSTQVACLTHVAANY-LNCKIEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNDHQFVTVCKILNLPEVSKDPRYKTNTLRVQNRKELIDILSTRFSEKATMEWLQLFEG-SGVPYGPINNMQQVFSDPQVLHNGLVMEMNHPTAGKIAVPGPGVRYSEFAVSHPKPPPLVGQHTVEILKSMLGYEDDAIEELLRTGAV 409          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: CEI90977.1 (Putative CoA-transferase family III [Rhizopus microsporus])

HSP 1 Score: 437.6 bits (1124), Expect = 4.700e-119
Identity = 229/412 (55.58%), Postives = 281/412 (68.20%), Query Frame = 0
Query:   40 SPTP---GPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPF---------VGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVE-LDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRK 439
            +P P   GPL+G+R+LDLTRVLAGP+ TM LGDLGADVIK+E+P  GDDTRAWGPPF           GESAYFL VNRNKRSV V+ K   G +++  L  ESDVL+EN+LPGKLE+ GLGY  LSE+NPRLIY SITG+G  G  A RPGYDVI++   GLM ITG P    G P K GVA+ DL TG++AH AILA+L  R  TG+GQ IDCSL+E+Q+A L NI  N+L+G   EAKR GT+H SIVPYQ F  +D   MIGAGND QF KL   +G+  L QD RF+TN DR ++RK LI LLQ     +     L+ +  A  G P+ P+ NI + F   Q   R +V +V HP  G++ L G PVKYS  K SIRR PPLLG+HT EVL++ LGY  + ++ LR+
Sbjct:   37 APAPSARGPLEGIRILDLTRVLAGPYCTMMLGDLGADVIKVENPNGGDDTRAWGPPFATNKDSNDLTHGESAYFLCVNRNKRSVTVNMKTEGGRQLIYDLVKESDVLVENYLPGKLEQLGLGYKQLSEINPRLIYASITGYGQTGPYADRPGYDVIIEAEGGLMHITGEPE---GAPVKVGVAITDLTTGMYAHSAILASLLQRSTTGKGQHIDCSLLESQVASLANIASNYLIGG-QEAKRMGTSHPSIVPYQVFPTRDSFVMIGAGNDGQFAKLCKRMGLTHLVQDNRFKTNSDRVKNRKELIQLLQDRLQEEDNCYWLETLNGA--GFPFAPINNIEQTFHHPQVLARGLVHEVNHPRAGKINLVGPPVKYSDAKTSIRRPPPLLGEHTNEVLEQILGYNKEKIETLRE 442          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: CEG72915.1 (Putative CoA-transferase family III [Rhizopus microsporus])

HSP 1 Score: 437.2 bits (1123), Expect = 6.100e-119
Identity = 228/412 (55.34%), Postives = 281/412 (68.20%), Query Frame = 0
Query:   40 SPTP---GPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPF---------VGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVE-LDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRK 439
            +P P   GPL+G+R+LDLTRVLAGP+ TM LGDLGADVIK+E+P  GDDTRAWGPPF           GESAYFL VNRNKRS+ V+ K   G +++  L  ESDVL+EN+LPGKLE+ GLGY  LSE+NPRLIY SITG+G  G  A RPGYDVI++   GLM ITG P    G P K GVA+ DL TG++AH AILA+L  R  TG+GQ IDCSL+E+Q+A L NI  N+L+G   EAKR GT+H SIVPYQ F  +D   MIGAGND QF KL   +G+  L QD RF+TN DR ++RK LI LLQ     +     L+ +  A  G P+ P+ NI + F   Q   R +V +V HP  G++ L G PVKYS  K SIRR PPLLG+HT EVL++ LGY  + ++ LR+
Sbjct:   37 APAPSARGPLEGIRILDLTRVLAGPYCTMMLGDLGADVIKVENPNGGDDTRAWGPPFATNKDSNDLTHGESAYFLCVNRNKRSITVNMKTEGGRQLIYDLVKESDVLVENYLPGKLEQLGLGYKQLSEINPRLIYASITGYGQTGPYADRPGYDVIIEAEGGLMHITGEPE---GAPVKVGVAITDLTTGMYAHSAILASLLQRSTTGKGQHIDCSLLESQVASLANIASNYLIGG-QEAKRMGTSHPSIVPYQVFPTRDSFVMIGAGNDGQFAKLCKRMGLTHLVQDNRFKTNSDRVKNRKELIQLLQDRLQEEDNCYWLETLNGA--GFPFAPINNIEQTFHHPQVLARGLVHEVNHPRAGKINLVGPPVKYSDAKTSIRRPPPLLGEHTNEVLEQILGYNKEKIETLRE 442          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: CEI87370.1 (Putative CoA-transferase family III [Rhizopus microsporus])

HSP 1 Score: 437.2 bits (1123), Expect = 6.100e-119
Identity = 229/412 (55.58%), Postives = 281/412 (68.20%), Query Frame = 0
Query:   40 SPTP---GPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPF---------VGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVE-LDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRK 439
            +P P   GPL+G+RVLDLTRVLAGP+ TM LGDLGADVIK+E+P  GDDTRAWGPPF           GESAYFL VNRNKRSV V+ K   G +++  L  ESDVL+EN+LPGKLE+ GLGY  LSE+NPRLIY SITG+G  G  A RPGYDVI++   GLM ITG P    G P K GVA+ DL TG++AH AILA+L  R  TG+GQ IDCSL+E+Q+A L NI  N+L+G   EAKR GT+H SIVPYQ F  +D   MIGAGND QF KL   +G+  L QD +F+TN DR ++RK LI LLQ     +     L+ +  A  G P+ P+ NI + F   Q   R +V +V HP  G++ L G PVKYS  K SIRR PPLLG+HT EVL++ LGY  + ++ LR+
Sbjct:   37 TPVPSARGPLEGIRVLDLTRVLAGPYCTMMLGDLGADVIKVENPNGGDDTRAWGPPFATNKDPNDLTHGESAYFLCVNRNKRSVTVNMKTEGGRQLIYDLVKESDVLVENYLPGKLEQLGLGYKQLSEINPRLIYASITGYGQTGPYADRPGYDVIIEAEGGLMHITGEPE---GAPVKVGVAITDLTTGMYAHSAILASLLQRSTTGKGQHIDCSLLESQVASLANIASNYLIGG-QEAKRMGTSHPSIVPYQVFSTRDSFVMIGAGNDGQFAKLCKRMGLTHLLQDNKFKTNSDRVKNRKELIQLLQDRLQEEDNCYWLETLNGA--GFPFAPINNIEQTFHHPQILARGLVHEVNHPRAGKISLVGPPVKYSDAKTSIRRPPPLLGEHTNEVLEQILGYNKEKIETLRE 442          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_020917527.1 (succinate--hydroxymethylglutarate CoA-transferase-like [Exaiptasia pallida])

HSP 1 Score: 437.2 bits (1123), Expect = 6.100e-119
Identity = 210/399 (52.63%), Postives = 291/399 (72.93%), Query Frame = 0
Query:   45 PLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYS-STKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            PL G+RVLDLTRVLAGPFA+M LGDLGA+V+K+E P  GDDTR+WGPPFVG ES YFLSVNRNK+S+ +DFK  +G EI++ LA +SDVL+EN+LPGKL+K GLGY+ L + NP L+YCSITG+G  G   QR GYDVI+  + GLM+ITG    E G+P K+GVA++DL TGL+AHGA++ AL  R +TG+GQKIDCSL+ +Q+A L ++  ++ L    +  R+GTAH SIVPYQAFK KDG  ++GAGND  F+KL   + +P LS+D  F+TN  R  +RK+LIN+L+  F  KT  E   + +   G+PYGP+ ++ + F+D Q ++++MV ++ HP++G + + G  V+Y+  T   +   PPLLGQHT+E+L++ LGY  + + +L  +K V
Sbjct:   34 PLTGVRVLDLTRVLAGPFASMLLGDLGAEVVKVEKPGEGDDTRSWGPPFVGSESTYFLSVNRNKKSIAIDFKDPKGSEIIKELAIKSDVLLENYLPGKLDKLGLGYESLRKDNPSLVYCSITGYGPGGPYDQRAGYDVIVSAVGGLMNITG---PEDGDPCKSGVALIDLVTGLYAHGAVMXALLKRQKTGQGQKIDCSLLASQVAVLSHVATSY-LNTGFKTGRYGTAHHSIVPYQAFKTKDGHLLVGAGNDGLFQKLCQVLDVPNLSKDNXFQTNDKRVLNRKVLINVLEKKFQNKTTKEWLCLLED-SGIPYGPINDVEQVFEDPQVKYKEMVQEMAHPSLGSVKVPGPAVEYNGQTSSFLASPPPLLGQHTKEILRDILGYDXEQISKLLHSKCV 427          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: CEG81683.1 (Putative CaiB/baiF CoA-transferase family protein C7orf10 homolog [Rhizopus microsporus])

HSP 1 Score: 436.8 bits (1122), Expect = 8.000e-119
Identity = 230/420 (54.76%), Postives = 285/420 (67.86%), Query Frame = 0
Query:   32 RSQPLSTTSPTP---GPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPF---------VGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVE-LDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRK 439
            R+   +  +P P   GPL+G+R+LDLTRVLAGP+ TM LGDLGADVIK+E+P  GDDTRAWGPPF           GESAYFL VNRNKRSV V+ K   G +++  L  ESDVL+EN+LPGKLEK GLGY  LSE+NPRLIY SITG+G  G  A RPGYDVI++   GLM ITG P    G P K GVA+ DL TG++AH AILA+L  R  TG+GQ IDCSL+E+Q+A L NI  N+L+G   EA+R GT+H SIVPYQ F  +D   MIGAGND QF KL   +G+  L QD RF+TN DR ++RK LI+LLQ     +     L+ +  A  G P+ P+ NI + F   Q   R +V +V HP  G++ L G PVKYS  K SIRR PPLLG+HT EVL++ LGY  + ++ LR+
Sbjct:   29 RAHLRNVEAPVPSARGPLEGIRILDLTRVLAGPYCTMMLGDLGADVIKVENPNGGDDTRAWGPPFATNKDPNDLTHGESAYFLCVNRNKRSVTVNMKTEGGRQLIYDLVKESDVLVENYLPGKLEKLGLGYKQLSEINPRLIYASITGYGQTGPYADRPGYDVIIEAEGGLMHITGEPE---GAPVKVGVAITDLTTGMYAHSAILASLLQRSTTGKGQHIDCSLLESQVASLANIASNYLVGG-QEARRMGTSHPSIVPYQVFPTRDSFVMIGAGNDGQFIKLCKRMGLTHLVQDNRFKTNSDRVKNRKELIHLLQVRLQEEDNCYWLETLNGA--GFPFAPINNIEQTFHHPQILARGLVHQVNHPRAGKINLVGPPVKYSDAKTSIRRPPPLLGEHTNEVLEQILGYNKEKIETLRE 442          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_013089080.1 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase-like isoform X1 [Biomphalaria glabrata])

HSP 1 Score: 436.8 bits (1122), Expect = 8.000e-119
Identity = 212/412 (51.46%), Postives = 289/412 (70.15%), Query Frame = 0
Query:   31 QRSQPLSTTSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            ++ + +S       PL G+R+LD++RVLAGP+ TM LGD+GA+VIK+E P  GDDTRAWGPPFV  ES YFL VNRNK+S+ VD K+ +G+++++ LA+ SDVL+EN++PGKL + GLGY  LS   P L+YCSITG+G  G  A R GYDVI+ G+ GLM+ITG P+D  G+P K GVA+ DL+TGL+   AILA+L  R QTGRGQ +DC+L+ T +  LVNI  N+ L    E +R+GTAH SIVPYQAFK  DG  ++GAGND QF+ LA  +G P L+ D R+ TNK R ++R +L+  L   F  K+  +   IF+   G+PYGP+ N+ + F D Q  H  ++ ++PHPTIG++ + G  V+YS TK     APPLLGQHT  VL++ LGY+ D +++L+K K+V
Sbjct:   67 KKQETISAPEEIKPPLNGVRILDMSRVLAGPYCTMILGDMGAEVIKVERPDVGDDTRAWGPPFVASESCYFLCVNRNKKSITVDLKKPQGVKLIKELAAISDVLVENYIPGKLSEMGLGYPELSAEFPHLVYCSITGYGQTGEYASRAGYDVIVSGLGGLMNITG-PAD--GDPCKVGVALTDLSTGLYGVSAILASLLSRQQTGRGQHLDCNLLSTNVTSLVNIASNF-LNTGQEGQRYGTAHPSIVPYQAFKTSDGFIIVGAGNDSQFKILAQCIGHPALANDERYATNKARVKNRDVLLQFLFKIFEEKSLSDWLKIFE-NSGIPYGPINNMKQVFSDPQVLHNGLIQEIPHPTIGKVRVVGPAVRYSETKTVEPTAPPLLGQHTHHVLKDILGYSEDAIEKLKKHKVV 473          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_005487053.2 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase isoform X1 [Zonotrichia albicollis])

HSP 1 Score: 436.8 bits (1122), Expect = 8.000e-119
Identity = 207/392 (52.81%), Postives = 281/392 (71.68%), Query Frame = 0
Query:   45 PLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRL 437
            PL G+++LDLTRVLAGPFATM LGDLGA+VIK+E P  GDDTRAWGPPF G ES YFLSVNRNK+S+ ++ K S+G+++++ LA+ SDV +ENF+PGKL K GLGY+ + ++ P ++YCSITG+G  G   QR GYD I   + GLM ITG    E GEP ++GVAM DLATGL+ +GAI+A L  R++TG+G  IDC+L+ TQ+ACL ++  N+ L    EAKRWGTAH SIVPYQAFK KDG  ++GAGND QF  +   + +PE+ +D R++TN  R ++RK LI++L T FS K  +E   +F+   G+PYGP+ N+ + F D Q  H  +V+++ HPT G++ + G  V+YS    S  + PPL+GQHT E+L+  LGY  D ++ L
Sbjct:   62 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRAWGPPFAGTESIYFLSVNRNKKSIAINMKDSKGVKVIKELAAASDVFVENFVPGKLAKMGLGYEDIKKIAPHIVYCSITGYGQTGPVVQRGGYDSIAAAVSGLMHITG---HEDGEPVRSGVAMTDLATGLYTYGAIMAGLLQRYKTGKGLHIDCNLLSTQVACLTHVAANY-LNCKIEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNDHQFVTVCKILNLPEVRKDSRYKTNTLRVQNRKELIDILSTRFSEKATIEWLQLFEG-SGVPYGPINNMQQVFSDPQVLHNGLVMEMNHPTAGKIAVPGPGVRYSEFAMSHPKPPPLVGQHTVEILKSVLGYEDDAIEEL 448          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_023466261.1 (formyl-CoA transferase [Rhizopus microsporus ATCC 52813] >ORE08070.1 CoA-transferase family III [Rhizopus microsporus var. microsporus] >PHZ12553.1 formyl-CoA transferase [Rhizopus microsporus ATCC 52813])

HSP 1 Score: 436.8 bits (1122), Expect = 8.000e-119
Identity = 229/412 (55.58%), Postives = 281/412 (68.20%), Query Frame = 0
Query:   40 SPTP---GPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPF---------VGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVE-LDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRK 439
            +P P   GPL+G+R+LDLTRVLAGP+ TM LGDLGADVIK+E+P  GDDTRAWGPPF           GESAYFL VNRNKRSV V+ K   G +++  L  ESDVL+EN+LPGKLEK GLGY  LSE+NPRLIY SITG+G  G  A RPGYDVI++   GLM ITG P    G P K GVA+ DL TG++AH AILA+L  R  TG+GQ IDCSL+E+Q+A L NI  N+L+G   EA+R GT+H SIVPYQ F  +D   MIGAGND QF KL   +G+  L QD RF+TN DR ++RK LI LLQ     +     L+ +  A  G P+ P+ NI + F   Q   R +V +V HP  G++ L G PVKYS  K SIRR PPLLG+HT EVL++ LGY  + ++ LR+
Sbjct:   37 TPVPSARGPLEGIRILDLTRVLAGPYCTMMLGDLGADVIKVENPNGGDDTRAWGPPFATNKDPNDLTHGESAYFLCVNRNKRSVTVNMKTEGGRQLIYDLVKESDVLVENYLPGKLEKLGLGYKQLSEINPRLIYASITGYGQTGPYADRPGYDVIIEAEGGLMHITGEPE---GAPVKVGVAITDLTTGMYAHSAILASLLQRSTTGKGQHIDCSLLESQVASLANIASNYLVGG-QEARRMGTSHPSIVPYQVFPTRDSFVMIGAGNDGQFVKLCKRMGLTHLVQDNRFKTNSDRVKNRKELIQLLQDRLQEEDNCYWLETLNGA--GFPFAPINNIEQTFHHPQILARGLVHQVNHPRAGKINLVGPPVKYSDAKTSIRRPPPLLGEHTNEVLEQILGYNKEKIETLRE 442          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_006675083.1 (hypothetical protein BATDEDRAFT_9127 [Batrachochytrium dendrobatidis JAM81] >EGF84024.1 hypothetical protein BATDEDRAFT_9127 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 436.4 bits (1121), Expect = 1.000e-118
Identity = 215/414 (51.93%), Postives = 290/414 (70.05%), Query Frame = 0
Query:   37 STTSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPF--------VGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            S ++ T GPL G+R+LDL+RVLAGP+ TM LGD+GA+VIK+E+   GDDTR WGPPF           ESAYFL VNRNK+S+ V+FK  +GL I+++LA+ +DVL+EN++PGKL+  GLGY+ + ++NPRL+Y SITG+G DG      GYD+I++   GLM ITG   ++ G P K GVA+ D+ TGL+ HGAILAAL  R++TGRGQKID SL+E Q+A L NI  N+L+ A  EAKRWGT H +IVPYQAF  +DG  +IG GNDKQF KL  A+  P+L+ + +F TN+ R ++RK L+  +     T TR E+  +   + G+P+GP+ N+ + F   Q  HRKMVV+V HP  G++ L G+PVKYS TKPS+R  PPLLGQHT  VL + LG++  +V  L+   +V
Sbjct:   60 SKSTTTNGPLSGIRILDLSRVLAGPYCTMILGDMGAEVIKVENTGSGDDTRTWGPPFAPNKDGSTTNQESAYFLGVNRNKKSIQVNFKTPQGLAIIKKLAASADVLVENYIPGKLDAIGLGYEAMQKINPRLVYASITGYGPDGPYKSHAGYDLIIEAEAGLMHITG---EQDGPPVKVGVAVTDIITGLYTHGAILAALMARNRTGRGQKIDSSLLECQVAALANIAHNYLV-AGQEAKRWGTQHSAIVPYQAFPTQDGDVVIGVGNDKQFAKLCEALKQPDLAFEEKFATNRSRVQNRKELVTNVSR--QTYTRQEMLDMLDTL-GIPFGPVNNLEQTFSHPQVLHRKMVVEVDHPKSGKIKLVGVPVKYSDTKPSVRLPPPLLGQHTRNVLVDDLGFSDAEVDELKAKGVV 466          
The following BLAST results are available for this feature:
BLAST of NO01G04070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005041431.14.700e-11952.51PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
CEI90977.14.700e-11955.58Putative CoA-transferase family III [Rhizopus micr... [more]
CEG72915.16.100e-11955.34Putative CoA-transferase family III [Rhizopus micr... [more]
CEI87370.16.100e-11955.58Putative CoA-transferase family III [Rhizopus micr... [more]
XP_020917527.16.100e-11952.63succinate--hydroxymethylglutarate CoA-transferase-... [more]
CEG81683.18.000e-11954.76Putative CaiB/baiF CoA-transferase family protein ... [more]
XP_013089080.18.000e-11951.46PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
XP_005487053.28.000e-11952.81PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
XP_023466261.18.000e-11955.58formyl-CoA transferase [Rhizopus microsporus ATCC ... [more]
XP_006675083.11.000e-11851.93hypothetical protein BATDEDRAFT_9127 [Batrachochyt... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007884NSK007884Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04070.1NO01G04070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|523777gene_421Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100205g12gene1288Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04070.1NO01G04070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04070 ID=NO01G04070|Name=NO01G04070|organism=Nannochloropsis oceanica|type=gene|length=1956bp
AGTCGCACACACATGAAGCGGAAACAAGGTTATGGCCTCGCAGTGCTGCT
GCGCGGAACGGCGGCGTGCCGTACAGCTCCAAGACAACCTCCTCCCCTGC
CCCAGCGGTCCCAACCCCTATCTACTACTAGCCCCACTCCTGGCCCCCTG
CAAGGCCTGCGGGTTTTAGACTTGACGCGCGTGCTGGCAGGCCCCTTTGC
GACCATGGCGTTGGGCGATTTGGGCGCGGATGTAATTAAGATCGAGCATC
CGCAGCGTGGGGACGACACCCGGGCTTGGGGGCCGCCTTTTGTGGGAGGA
GAGAGTGCGTACTTCTTGAGCGTAAACCGGAACAAACGAAGCGTCGGCGT
GGATTTCAAGCAATCCGAGGGCTTGGAGATTGTGCGGCGACTGGCGTCGG
AATCAGATGTGCTAATCGAGAACTTCTTGCCGGGGAAATTGGAGAAAGCT
GGGTTGGGCTATGATGTCCTGAGTGAGCTGAATCCGCGTCTTATCTATTG
CAGCATAACCGGATTTGGCAGTGACGGAATTGCGGCACAACGTCCAGGGT
ATGACGTGATTATGCAGGGAATGTATGGATTGATGAGTATCACGGGCTCG
CCGTCGGACGAGGGTGGTGAGCCTGCCAAGACAGgtgtgtacgtagggta
gggggttatttctcttctcattttaaacgcgaaacctaccccaaaagact
cactccttcccttctcgcctcttctatcacaatctacacaaacatgcagG
CGTGGCGATGGTGGATCTGGCCACGGGTCTCTTCGCACACGGAGCCATCC
TGGCTGCCCTTCACGGCCGGCATCAGACAGGAAGAGGACAAAAGATTGAT
TGCTCGTTGATGGAGACGCAGTTGGCGTGTTTGGTCAACATTGGACAGAA
CTGGTTATTGGGGGCTACGACGGAGGCGAAGAGATGgtgagaaagacgtg
gtaaatgcgtgagtggatggtcgctggaggggccagagatacagggacag
atttaaaatggactattctataatatttagcatgcacgattataaatgcg
atctatttctccgcagGGGCACGGCCCATGAGAGCATCGTGCCATATCAG
GCGTTCAAATGTAAAGACGGGAAGTACATGATAGGCGCAGGCAACGACAA
ACAGgtcagacggggggcaacagctaggaaagaggaggatatgtatacgg
tttcctacgcttacttcttttcctccatctcgccctttttcagTTTGAAA
AGCTGGCCGTGGCTGTTGGAATGCCCGAGCTCAGTCAAGACCCTCGTTTT
CGCACCAACAAGGACCGCACTGAGCATCGCAAGATTCTCATCAATCTGTT
GCAGACTTTTTTTAGCACCAAGACACGCGTGGAGCTTGATGCCATATTTA
AGgtacgcccacgactggaagggtgaaagggtagatattcctttctcctt
tcattttccatctcttgatcaccggcatcaccatatttccatccgccccc
tcctctttctgtcctcacatacaattttgctttcatctccaacatcataa
ttatcatcacgctagGCAATGGGCGGCCTGCCTTATGGACCGCTCCGCAA
TATAGGCGAAGCCTTTCAGGACGCCCAAGCCCAACATCGCAAAATGGTGG
TAAAGGTACCGCACCCTACCATCGGTGAGCTGCCCCTTGCCGGCTTGCCT
GTCAAATATTCTAGCACTAAGCCTTCCATCCGCCGGGCGCCGCCTTTGCT
GGGCCAACACACTGAAGAGGTGCTGCAGGAGTGCCTGGGGTACACGGTTG
ATGACGTGCAGCGCTTGAGGAAGGCCAAAATCGTATGTTAACTTTTCCGA
TTCAGATGACTGAAAGCATGAGTAGGCAAAGAGGATAAGGAAATGTGAGG
GAATTGTACAGGGAGCAGCAGAGAAACAATAGGAGGGCGAGTAAAATGAA
AAAGAT
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protein sequence of NO01G04070.1

>NO01G04070.1-protein ID=NO01G04070.1-protein|Name=NO01G04070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MKRKQGYGLAVLLRGTAACRTAPRQPPPLPQRSQPLSTTSPTPGPLQGLR
VLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAY
FLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGY
DVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDE
GGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLA
CLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQF
EKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAI
FKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKY
SSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIVC*
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Synonyms
Publications