NO01G04070, NO01G04070 (gene) Nannochloropsis oceanica

Overview
NameNO01G04070
Unique NameNO01G04070
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1956
Alignment locationchr1:1087522..1089477 +

Link to JBrowse

Properties
Property NameValue
DescriptionCaib baif-transferase family protein c7orf10-like isoform 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1087522..1089477 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR023606CoA-Trfase_III_dom
IPR003673CoA-Trfase_fam_III
Homology
BLAST of NO01G04070 vs. NCBI_GenBank
Match: EWM29343.1 (caib baif -transferase family protein c7orf10-like isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 673.3 bits (1736), Expect = 5.100e-190
Identity = 332/439 (75.63%), Postives = 368/439 (83.83%), Query Frame = 0
Query:   12 LLRGTAACRTAPRQPPPLPQRSQPLSTTSPT--------PGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            L R     RT   QPP L    Q  + T+ T         GPL GLRVLDLTRVLAGPFATMALGDLGADVIKIEHP RGDDTR WGPPF+ GE+AY+L VNRNKRSV VDFK+ +GLEI+RRLA++SDV IENFLPGKLE  GLGY  LSELNP LIYCSITG+GSDG AA RPGYDVI QGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALH RH+TGRGQK+DCSLMETQLACLVNIGQNWL+GAT EAK WGTAHESIVPYQAF CKDGKYM+GAGNDKQFEKLA AVGMP+L  DPRF TN+DR ++RK LI +L+T+F TKTR ELD +F+A+GGLP GPLRNIGEAFQD QAQHR MVVKV HPTIG+LPLAG+PVKYS TKPSIR APPLLGQ T++VLQ  L YT ++V+ + + K++
Sbjct:   13 LWRCRGRIRTRHFQPPHLSAMLQRAALTTMTETANMATNKGPLDGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPGRGDDTRHWGPPFIQGEAAYYLCVNRNKRSVAVDFKRPKGLEILRRLAAKSDVFIENFLPGKLESVGLGYQALSELNPGLIYCSITGYGSDGPAAHRPGYDVITQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHSRHRTGRGQKVDCSLMETQLACLVNIGQNWLVGATKEAKTWGTAHESIVPYQAFSCKDGKYMVGAGNDKQFEKLANAVGMPQLCNDPRFGTNRDRAQNRKALIGILETYFLTKTRTELDELFEAIGGLPCGPLRNIGEAFQDEQAQHRGMVVKVAHPTIGDLPLAGIPVKYSGTKPSIRSAPPLLGQDTKDVLQSFLKYTAEEVEEMEREKVI 451          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_008306350.1 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase isoform X1 [Cynoglossus semilaevis])

HSP 1 Score: 446.4 bits (1147), Expect = 1.000e-121
Identity = 220/407 (54.05%), Postives = 290/407 (71.25%), Query Frame = 0
Query:   36 LSTTSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            +S    T  PL+G+RVLDLTRVLAGPFATM LGDLGA+VIK+E P  GDDTR WGPPFVG ESAYFLSVNRNK+S+ +D K+ +G++I+  LA  SDV++ENF+PGKL++ GLGY+ LS +NPRLIYCSI+G+G  G  +Q PGYD I   + G+M ITG    EGG+P + GVAM DLATGL+AHGAI+AAL  RH TGRG  IDC+L+ +Q++CL +I  N+ L A  EA+RWGTAHESIVPYQ F+ KDG  ++ AGNDKQF K+   + +  L+Q+P+++TNK R ++R+ LINLL   F  +T  +    F    G+P GP+ +I E F D Q +H  ++  + HPT G + + G  V+YSS  PS    PPL+GQHT +VL+E L Y+ D +  L ++  V
Sbjct:   39 MSLAGETLRPLEGVRVLDLTRVLAGPFATMILGDLGAEVIKVERPGSGDDTRQWGPPFVGSESAYFLSVNRNKKSIAIDMKRPQGVKILTELAEVSDVVVENFVPGKLQQMGLGYNQLSGVNPRLIYCSISGYGQTGPQSQSPGYDSIASAVSGMMHITG---PEGGDPVRPGVAMTDLATGLYAHGAIMAALLHRHNTGRGVHIDCNLLSSQVSCLSHIAANY-LNAGKEARRWGTAHESIVPYQGFRTKDGHIVVAAGNDKQFVKVCEVLKLTSLTQEPKYKTNKLRVQNRRELINLLNQRFMEETTSDWLRRFTG-SGVPVGPINSIQEVFADPQVKHNDLIQAMNHPTAGRISVPGPAVRYSSFCPSEATPPPLIGQHTTQVLRETLSYSDDVITDLLESGAV 440          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: KZS18807.1 (Alpha-methylacyl-CoA racemase [Daphnia magna])

HSP 1 Score: 446.4 bits (1147), Expect = 1.000e-121
Identity = 220/403 (54.59%), Postives = 283/403 (70.22%), Query Frame = 0
Query:   40 SPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            S +   L G++VLDLTRVLAGP+ T  LGDLGAD++K+E  + GDDTR+WGPPF+G  S YF+S+NRNK+S+ +D K + G +I++ LA +SDVL+EN+LPGK+E+ GLGY+ L ++NP+LIYCSITG+GS G  A RPGYDVI   M GL+ +TG    E G P KTGVA+ DLATGL+AHGAI+AAL  R +TG GQ+I  +L+ TQ+ACLVN+G N+L+ A  EAKRWGTAHESIVPYQAF   DG   IG  ND+QF +L   +    LS DP++ TN  R EHR+ L+  L    STKT  E    F+      YGP+ ++ E F D Q QH  MV +V HP+ G L L G PVK+S T   IR  PP LGQHTE +LQE LGY++  +Q+LR + +V
Sbjct:   25 SSSTDALSGVKVLDLTRVLAGPYCTQILGDLGADILKVERLKVGDDTRSWGPPFLGNTSCYFISINRNKKSICIDLKSNNGRKIIQELALQSDVLVENYLPGKMEEYGLGYEDLQKINPQLIYCSITGYGSTGPYASRPGYDVIASSMGGLIYVTG---PEDGAPCKTGVALTDLATGLYAHGAIMAALFQRQKTGCGQRISANLLSTQVACLVNLGSNYLM-AGQEAKRWGTAHESIVPYQAFATSDGYITIGGTNDRQFRELCSRINRSHLSSDPKYLTNALRVEHRRELVEELGKTLSTKTNAEWLESFRG-AHFSYGPINSLSEVFADPQVQHNDMVQEVDHPSAGTLKLVGPPVKFSGTGNRIRLPPPELGQHTESILQERLGYSLAHIQQLRDSGVV 422          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_005709258.1 (CoA-transferase family protein [Galdieria sulphuraria] >EME32738.1 CoA-transferase family protein [Galdieria sulphuraria])

HSP 1 Score: 444.5 bits (1142), Expect = 3.800e-121
Identity = 224/402 (55.72%), Postives = 288/402 (71.64%), Query Frame = 0
Query:   44 GPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFV-GGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGG--LPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            GPL+G+RVLDL+RVLAGPF TM LGDLGA+VIKIE P+ GDDTR+WGPPF  GGESAY L VNRNKRSV +DF +  G E++++LA++SDVL+ENFLPGKL + GLGY+ L ++NPRLIYCS+TGFG  G  AQR GYDVI+  + GLM ITG    E GEP K GVA+ DLATG+FA  +I++AL  R + G GQ ++ SL+E Q+A L NI  N+L+G  T  KRWGTAHESIVPYQ F+ KDG  +IGA N+ QF+ L   +G+  L +D +F  N  R E+R+ LI +LQ  F  KT    D   K + G  LPYGP+  I + F+D Q  HR+M+ ++ HP+ G++ L G   KYS TKPSIR  PPLLGQHT+EVL+  L  T++++ +L K  I+
Sbjct:   43 GPLKGVRVLDLSRVLAGPFCTMQLGDLGAEVIKIERPKTGDDTRSWGPPFAPGGESAYLLCVNRNKRSVAIDFSKPSGAELIKKLAAQSDVLVENFLPGKLAQYGLGYEDLQKINPRLIYCSLTGFGQTGPYAQRAGYDVIVSAIGGLMGITG---PENGEPCKVGVAITDLATGMFACTSIVSALLARERIGIGQHVETSLLEAQVALLANIASNYLIGGKT-GKRWGTAHESIVPYQGFRTKDGYLIIGALNNSQFQTLCKTLGLENLIRDDKFAKNAKRVENRQQLIEILQETFQKKT---TDEWLKELDGVNLPYGPINTIDQVFRDPQVIHREMIQQIHHPSAGDIRLTGFAAKYSRTKPSIRLPPPLLGQHTQEVLKNWL--TIEELNQLEKEGII 435          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_019208668.1 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase isoform X1 [Oreochromis niloticus])

HSP 1 Score: 443.4 bits (1139), Expect = 8.600e-121
Identity = 225/423 (53.19%), Postives = 296/423 (69.98%), Query Frame = 0
Query:   22 APRQPPPLP--QRSQPLSTTSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            +P QP   P   R +  + T  T  PL+G+RVLDLTRVLAGPFA+M LGDLGA VIK+E P  GDDTRAWGPPFV  ES YFLSVNRNK+S+ VD K   G +IV++LA   DVL+EN++PGKL   GLGY+ LS LNPRLIYCSITG+G  G  AQ PGYD I   + G+M ITG    EGG+P + GVAM DLATGL+AHGA++AAL  R +TGRG  IDC+L+ +Q++CL +I  N+ L A  EA+RWGTAHESIVPYQ FK KDG  ++ AGN+KQF ++   + + EL++DP+++TNK R E+RK L++ L   F  +T  +    FK   G+P GP+ +I E F + Q +H ++V ++ HPT G + + G  V++SS  PS    PPL+GQHT EVL++ L Y+ D ++ L ++K V
Sbjct:   22 SPLQPLRCPGGGRWESSTQTGETLRPLEGVRVLDLTRVLAGPFASMILGDLGAQVIKVERPGAGDDTRAWGPPFVASESTYFLSVNRNKKSIAVDLKHPRGAQIVQQLAGVCDVLLENYVPGKLRHMGLGYEQLSGLNPRLIYCSITGYGQTGPHAQSPGYDSIASAVSGMMHITG---PEGGDPVRPGVAMTDLATGLYAHGAVMAALLQRQKTGRGVHIDCNLLSSQVSCLSHIAANY-LNAGKEARRWGTAHESIVPYQGFKTKDGHIVVAAGNEKQFVRVCQVMELMELTEDPKYKTNKLRVENRKQLLHTLSQRFLQETTADWLKKFKG-SGVPIGPINSIQEVFSEPQVKHNRLVQEMNHPTAGRIAVIGPAVRFSSFSPSGPTPPPLIGQHTVEVLRDVLSYSDDIIETLLESKAV 439          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_018548829.1 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase [Lates calcarifer])

HSP 1 Score: 442.6 bits (1137), Expect = 1.500e-120
Identity = 217/400 (54.25%), Postives = 289/400 (72.25%), Query Frame = 0
Query:   45 PLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLL-QTFFSTKTRVELDAIFKAMG-GLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            PL+G+RVLDLTRVLAGPFATM LGDLGA+VIK+E P  GDDTRAWGPPFVG ESAYFLS+NRNK+S+ VD K   G EI++ LA   DVL+EN+LPGKL + GLGY+ LS +NP+L+YCSI+G+G  G  +Q PGYD I   + G+M ITG    E GEP + GVAM DLATGL+AHGA++AAL  RH+TGRG  IDC+L+ +Q++CL +I  N+ L A  EA+RWGTAHESIVPYQ FK KDG  ++ AGNDKQF K+   + + EL+++PR++TNK R ++RK L++ L Q F   KT    D + +  G G+P GP+ +I E F D Q +H  ++ ++ HPT G + + G  V++SS  P     PPL+GQHT +VL++ L Y+ D ++ L +++ V
Sbjct:   56 PLEGVRVLDLTRVLAGPFATMILGDLGAEVIKVERPGAGDDTRAWGPPFVGSESAYFLSINRNKKSIAVDLKHPRGAEIIQELAGVCDVLVENYLPGKLHQMGLGYEQLSRVNPQLVYCSISGYGQTGPQSQSPGYDSIASAVSGMMHITG---PEDGEPVRPGVAMTDLATGLYAHGAVMAALLQRHRTGRGAHIDCNLLSSQVSCLSHIAANY-LNAGKEARRWGTAHESIVPYQGFKTKDGHVVVAAGNDKQFVKVCQVLELMELTEEPRYKTNKLRVQNRKQLLHTLSQRFLQEKT---ADWLRRFDGSGVPVGPINSIQEVFSDPQVKHNGLIQEMDHPTSGRISVPGPAVRFSSFTPGGPTPPPLIGQHTVQVLRDTLSYSDDIIKTLLESRAV 448          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_005944715.2 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase [Haplochromis burtoni])

HSP 1 Score: 441.4 bits (1134), Expect = 3.300e-120
Identity = 222/423 (52.48%), Postives = 298/423 (70.45%), Query Frame = 0
Query:   22 APRQPPPLP--QRSQPLSTTSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            +P QP   P   R +  + T  T  PL+G+RVLDLTRVLAGPFA+M LGDLGA VIK+E P  GDDTRAWGPPFV  ESAYFLSVNRNK+S+ VD K   G +IV++LA   DVL+EN++PGKL + GLGY+ LS LNPRL+YCSITG+G  G  AQ PGYD I   + G+M ITG    EGG+P + GVAM DLATGL+AHGA++AAL  R +TGRG  IDC+L+ +Q++CL +I  N+ L A  EA+RWGTAHESIVPYQ FK KDG  ++ AGN+KQF ++   + + EL+++P++++NK R E+RK L++ L   F  +T  +    FK   G+P GP+ +I E F + Q +H ++V ++ HPT G + + G  V++SS  PS    PPL+GQHT EVL++ L Y+ + ++ L ++K V
Sbjct:   22 SPLQPLRCPGGGRWESSTRTGETLRPLEGVRVLDLTRVLAGPFASMILGDLGAQVIKVERPGAGDDTRAWGPPFVASESAYFLSVNRNKKSIAVDLKHPRGAQIVQQLAGVCDVLLENYVPGKLRQMGLGYEQLSGLNPRLVYCSITGYGQTGPHAQSPGYDSIASAVSGMMHITG---PEGGDPVRPGVAMTDLATGLYAHGAVMAALLQRQKTGRGVHIDCNLLSSQVSCLSHIAANY-LNAGKEARRWGTAHESIVPYQGFKTKDGHIVVAAGNEKQFVRVCQVMELTELTEEPKYKSNKLRVENRKQLLHTLSQRFLQETTADWLKKFKG-SGVPVGPINSIQEVFSEPQVKHNRLVQEMNHPTAGRIAVVGPAVRFSSFSPSGPTPPPLIGQHTVEVLRDVLSYSNEVIETLLESKAV 439          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_016609984.1 (hypothetical protein SPPG_02452 [Spizellomyces punctatus DAOM BR117] >KND01945.1 hypothetical protein SPPG_02452 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 439.9 bits (1130), Expect = 9.500e-120
Identity = 225/432 (52.08%), Postives = 293/432 (67.82%), Query Frame = 0
Query:   11 VLLRGTAACRTAPRQPPPLPQRSQPLSTTSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFV---------GGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDV 434
            V  R T  C +A RQ           S+ +    PL+G+RVLDLTRVLAGP+ TM LGD GA++IK+E+P+ GDDTRAWGPPF           GESAYFL VNRNK+S+ V+FK+ EGL+I++RLA++SDV++ENF+PGKL++ GLGY+ L ++NPRLIY SITG+G DG  A+ PGYDVI +   GLM ITG P    G P K GVA+ D+ TGL+ HGA+LAAL  R +TG GQK+D SL+E Q+A L NI  ++L+G   EAKRWGT H +IVPYQAF  KD   ++GAGND QF KL   +   +L ++ +F+TN  R E+RK LI+LL   F           FK++ G P+ P+ NI + F+  Q  HR+M+ +V HP  G + L G+PVKYS TKPSIR  PP+LGQHT EVL   L YT +++
Sbjct:   56 VAFRPTVLCSSARRQ-------HSSTSSAAANALPLEGVRVLDLTRVLAGPYCTMILGDYGAEIIKVENPKSGDDTRAWGPPFAPNKDSNDNQPGESAYFLGVNRNKKSITVNFKKPEGLDILKRLAAKSDVMVENFVPGKLDEIGLGYEDLRKVNPRLIYASITGYGPDGPYAKAPGYDVITEAEAGLMYITGEPD---GPPVKVGVAITDMTTGLYTHGAVLAALLARARTGLGQKLDISLLECQVASLANIAHSYLIGG-QEAKRWGTQHAAIVPYQAFPTKDSFIVVGAGNDGQFRKLCTKIERLDLVENEKFKTNAARVENRKELIDLLSDIFRQHPTSHWLREFKSL-GFPFAPVNNIQQTFEHPQVIHREMIQEVDHPRAGRIKLTGIPVKYSHTKPSIRLPPPILGQHTFEVLSNMLEYTEEEI 475          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: EFX85037.1 (hypothetical protein DAPPUDRAFT_194168 [Daphnia pulex])

HSP 1 Score: 438.3 bits (1126), Expect = 2.800e-119
Identity = 214/404 (52.97%), Postives = 285/404 (70.54%), Query Frame = 0
Query:   39 TSPTPGPLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            +S     L G++VLDLTRVLAGP+ T  LGDLGAD++K+E  + GDDTR+WGPPFVG  S YF+S+NRNK+S+ +D K  EG +I+ +LA +SDVL+EN+LPGK+E+ GLGY+ L ++NP+LIYCSITG+GS G  A RPGYDVI   + GL+ ITG    E G P KTGVA+ DLATGL+AHGAI+AAL  R +T  GQ+I  +L+ TQ+ACLVN+G N+L+ A  EAKRWGTAHESIVPYQAF   DG   +G  ND+QF +L   +   +LS DP++ TN  R +HR  L++ +    +TK+  E   +F+      YGP+ ++ E F D Q QH +MV ++ HP+ G L L G PV++S+T   IR  PP LGQHTE VLQ+ LGY+   +Q+LR+  I+
Sbjct:   26 SSTVSDALAGVKVLDLTRVLAGPYCTQILGDLGADILKVERLKVGDDTRSWGPPFVGNTSCYFISINRNKQSICIDLKSEEGKKIIEQLAMQSDVLVENYLPGKMEEYGLGYEDLKKINPQLIYCSITGYGSTGPYASRPGYDVIASSIGGLIHITG---PEDGAPCKTGVALTDLATGLYAHGAIMAALFQRQKTNTGQRISANLLSTQVACLVNLGSNYLM-AGQEAKRWGTAHESIVPYQAFPTSDGYVTVGGTNDRQFRELCSRICRSDLSSDPKYLTNALRVKHRSELVDEIGKTLATKSNSEWMELFRG-AHFSYGPINSLSEVFADPQVQHNRMVQEIDHPSAGTLKLVGPPVEFSNTGNYIRLPPPELGQHTESVLQDRLGYSSVQIQQLRENGII 424          
BLAST of NO01G04070 vs. NCBI_GenBank
Match: XP_005041430.1 (PREDICTED: succinate--hydroxymethylglutarate CoA-transferase isoform X1 [Ficedula albicollis])

HSP 1 Score: 437.6 bits (1124), Expect = 4.700e-119
Identity = 209/398 (52.51%), Postives = 283/398 (71.11%), Query Frame = 0
Query:   45 PLQGLRVLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAYFLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGYDVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDEGGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLACLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQFEKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAIFKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKYSSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIV 443
            PL G+++LDLTRVLAGPFATM LGDLGA+VIK+E P  GDDTRAWGPPF G ES YFLSVNRNK+S+ ++ K S+G+++++ LA+ SDV +ENF+PGKL   GLGY+ + ++ P ++YCSITG+G  G   QR GYD I   + GLM ITG    + GEP + GVAM DLATGL+ +GAI+A L  R++TGRG  IDC+L+ TQ+ACL ++  N+ L    EAKRWGTAH SIVPYQAFK KDG  ++GAGND QF  +   + +PE+S+DPR++TN  R ++RK LI++L T FS K  +E   +F+   G+PYGP+ N+ + F D Q  H  +V+++ HPT G++ + G  V+YS    S  + PPL+GQHT E+L+  LGY  D ++ L +   V
Sbjct:   54 PLDGVKILDLTRVLAGPFATMNLGDLGAEVIKVERPGAGDDTRAWGPPFAGTESVYFLSVNRNKKSIAINMKDSKGVKLIKELAAASDVFVENFVPGKLAGMGLGYEDIKKIAPHIVYCSITGYGQTGPVVQRGGYDSIAAAVSGLMHITG---HKDGEPVRPGVAMTDLATGLYTYGAIMAGLLQRYKTGRGLHIDCNLLSTQVACLTHVAANY-LNCKIEAKRWGTAHGSIVPYQAFKTKDGYIVVGAGNDHQFVTVCKILNLPEVSKDPRYKTNTLRVQNRKELIDILSTRFSEKATMEWLQLFEG-SGVPYGPINNMQQVFSDPQVLHNGLVMEMNHPTAGKIAVPGPGVRYSEFAVSHPKPPPLVGQHTVEILKSMLGYEDDAIEELLRTGAV 446          
The following BLAST results are available for this feature:
BLAST of NO01G04070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29343.15.100e-19075.63caib baif -transferase family protein c7orf10-like... [more]
XP_008306350.11.000e-12154.05PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
KZS18807.11.000e-12154.59Alpha-methylacyl-CoA racemase [Daphnia magna][more]
XP_005709258.13.800e-12155.72CoA-transferase family protein [Galdieria sulphura... [more]
XP_019208668.18.600e-12153.19PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
XP_018548829.11.500e-12054.25PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
XP_005944715.23.300e-12052.48PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]
XP_016609984.19.500e-12052.08hypothetical protein SPPG_02452 [Spizellomyces pun... [more]
EFX85037.12.800e-11952.97hypothetical protein DAPPUDRAFT_194168 [Daphnia pu... [more]
XP_005041430.14.700e-11952.51PREDICTED: succinate--hydroxymethylglutarate CoA-t... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007884NSK007884Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G04070.1NO01G04070.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|523777gene_421Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100205g12gene1288Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G04070.1NO01G04070.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G04070 ID=NO01G04070|Name=NO01G04070|organism=Nannochloropsis oceanica|type=gene|length=1956bp
AGTCGCACACACATGAAGCGGAAACAAGGTTATGGCCTCGCAGTGCTGCT
GCGCGGAACGGCGGCGTGCCGTACAGCTCCAAGACAACCTCCTCCCCTGC
CCCAGCGGTCCCAACCCCTATCTACTACTAGCCCCACTCCTGGCCCCCTG
CAAGGCCTGCGGGTTTTAGACTTGACGCGCGTGCTGGCAGGCCCCTTTGC
GACCATGGCGTTGGGCGATTTGGGCGCGGATGTAATTAAGATCGAGCATC
CGCAGCGTGGGGACGACACCCGGGCTTGGGGGCCGCCTTTTGTGGGAGGA
GAGAGTGCGTACTTCTTGAGCGTAAACCGGAACAAACGAAGCGTCGGCGT
GGATTTCAAGCAATCCGAGGGCTTGGAGATTGTGCGGCGACTGGCGTCGG
AATCAGATGTGCTAATCGAGAACTTCTTGCCGGGGAAATTGGAGAAAGCT
GGGTTGGGCTATGATGTCCTGAGTGAGCTGAATCCGCGTCTTATCTATTG
CAGCATAACCGGATTTGGCAGTGACGGAATTGCGGCACAACGTCCAGGGT
ATGACGTGATTATGCAGGGAATGTATGGATTGATGAGTATCACGGGCTCG
CCGTCGGACGAGGGTGGTGAGCCTGCCAAGACAGgtgtgtacgtagggta
gggggttatttctcttctcattttaaacgcgaaacctaccccaaaagact
cactccttcccttctcgcctcttctatcacaatctacacaaacatgcagG
CGTGGCGATGGTGGATCTGGCCACGGGTCTCTTCGCACACGGAGCCATCC
TGGCTGCCCTTCACGGCCGGCATCAGACAGGAAGAGGACAAAAGATTGAT
TGCTCGTTGATGGAGACGCAGTTGGCGTGTTTGGTCAACATTGGACAGAA
CTGGTTATTGGGGGCTACGACGGAGGCGAAGAGATGgtgagaaagacgtg
gtaaatgcgtgagtggatggtcgctggaggggccagagatacagggacag
atttaaaatggactattctataatatttagcatgcacgattataaatgcg
atctatttctccgcagGGGCACGGCCCATGAGAGCATCGTGCCATATCAG
GCGTTCAAATGTAAAGACGGGAAGTACATGATAGGCGCAGGCAACGACAA
ACAGgtcagacggggggcaacagctaggaaagaggaggatatgtatacgg
tttcctacgcttacttcttttcctccatctcgccctttttcagTTTGAAA
AGCTGGCCGTGGCTGTTGGAATGCCCGAGCTCAGTCAAGACCCTCGTTTT
CGCACCAACAAGGACCGCACTGAGCATCGCAAGATTCTCATCAATCTGTT
GCAGACTTTTTTTAGCACCAAGACACGCGTGGAGCTTGATGCCATATTTA
AGgtacgcccacgactggaagggtgaaagggtagatattcctttctcctt
tcattttccatctcttgatcaccggcatcaccatatttccatccgccccc
tcctctttctgtcctcacatacaattttgctttcatctccaacatcataa
ttatcatcacgctagGCAATGGGCGGCCTGCCTTATGGACCGCTCCGCAA
TATAGGCGAAGCCTTTCAGGACGCCCAAGCCCAACATCGCAAAATGGTGG
TAAAGGTACCGCACCCTACCATCGGTGAGCTGCCCCTTGCCGGCTTGCCT
GTCAAATATTCTAGCACTAAGCCTTCCATCCGCCGGGCGCCGCCTTTGCT
GGGCCAACACACTGAAGAGGTGCTGCAGGAGTGCCTGGGGTACACGGTTG
ATGACGTGCAGCGCTTGAGGAAGGCCAAAATCGTATGTTAACTTTTCCGA
TTCAGATGACTGAAAGCATGAGTAGGCAAAGAGGATAAGGAAATGTGAGG
GAATTGTACAGGGAGCAGCAGAGAAACAATAGGAGGGCGAGTAAAATGAA
AAAGAT
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protein sequence of NO01G04070.1

>NO01G04070.1-protein ID=NO01G04070.1-protein|Name=NO01G04070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MKRKQGYGLAVLLRGTAACRTAPRQPPPLPQRSQPLSTTSPTPGPLQGLR
VLDLTRVLAGPFATMALGDLGADVIKIEHPQRGDDTRAWGPPFVGGESAY
FLSVNRNKRSVGVDFKQSEGLEIVRRLASESDVLIENFLPGKLEKAGLGY
DVLSELNPRLIYCSITGFGSDGIAAQRPGYDVIMQGMYGLMSITGSPSDE
GGEPAKTGVAMVDLATGLFAHGAILAALHGRHQTGRGQKIDCSLMETQLA
CLVNIGQNWLLGATTEAKRWGTAHESIVPYQAFKCKDGKYMIGAGNDKQF
EKLAVAVGMPELSQDPRFRTNKDRTEHRKILINLLQTFFSTKTRVELDAI
FKAMGGLPYGPLRNIGEAFQDAQAQHRKMVVKVPHPTIGELPLAGLPVKY
SSTKPSIRRAPPLLGQHTEEVLQECLGYTVDDVQRLRKAKIVC*
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Synonyms
Publications