NO01G04030, NO01G04030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_086134894.1 (CPBP family intramembrane metalloprotease [Methylocaldum sp. SAD2]) HSP 1 Score: 72.4 bits (176), Expect = 2.800e-9 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 0 Query: 118 IAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALL-TLPALLLH-------FASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWM-GLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 IA G L+ LLA+ +G INPL A +GF P+ V ++ TLP LL ++ R +++ L E L G F S ++ L L AG+ EE+ FRG LQP Q N W+ G+ S+ +FA +H TP Y LLA + VYLG + + + NL +P+++H ++D + F+ Sbjct: 16 IATWFEGGLI--LLAYVIGWAVSINPL----AHIGFSPMALVLGIVGTLPLYLLFALSYNLPWSGMRAVKNFLVEKL-GPFLSRYRWQELL-------YLGFLAGISEEILFRGLLQPWFEQ--NWGWIGGIAFSNLVFALVHWVTPLYALLAGLTGVYLG-IALDFGGERNLVIPILIHAIYDFLAFI 187
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_077728585.1 (CPBP family intramembrane metalloprotease [Methylocaldum sp. 14B]) HSP 1 Score: 72.0 bits (175), Expect = 3.600e-9 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 0 Query: 118 IAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALL-TLPALLLH-------FASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWM-GLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 IA G L+ LLA+ +G INPL A +GF P+ V ++ TLP LL ++ R +++ L E L G F S ++ L L AG+ EE+ FRG LQP Q N W+ G+ S+ +FA +H TP Y LLA + VYLG + + + NL +P+++H ++D + F+ Sbjct: 16 IATWFEGGLI--LLAYVIGWAVSINPL----AHIGFSPMALVWGIVGTLPLYLLFALSYNLPWSGMRAVKNFLVEKL-GPFLSRYRWQELL-------YLGFLAGISEEILFRGLLQPWFEQ--NWGWIGGIAFSNLVFALVHWVTPLYALLAGLTGVYLG-IALDFGGERNLVIPILIHAIYDFLAFI 187
BLAST of NO01G04030 vs. NCBI_GenBank
Match: KPK04676.1 (hypothetical protein AMS20_08400 [Gemmatimonas sp. SG8_28]) HSP 1 Score: 71.6 bits (174), Expect = 4.800e-9 Identity = 61/172 (35.47%), Postives = 87/172 (50.58%), Query Frame = 0 Query: 125 ELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALLTLPALLLHFASG-----REIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVV 292 EL LGL+A V PL T P G LA+ A L L L + R + D L S+ +F TA + + AI+ +AG+GEE+ FRG +Q ++ P +GL +S +F HA T Y +LA V+ VYLG L + +WVP++VH L+D+V Sbjct: 9 ELGLGLVAMVVAWLVGY-PLLTTIRPSVPGSALALLATLPLLGALWGLLTSNWPPIRRLVDELERSVIPLFRRCTA----IQLFAIAA----AAGIGEELLFRGLIQGAITSAA-GPAIGLFAASLLFGLAHAITGIYAVLAAVVGVYLGLLGLLTGGVWVPIVVHALYDLV 170
BLAST of NO01G04030 vs. NCBI_GenBank
Match: PHX63406.1 (hypothetical protein CK551_06215 [Planctomycetaceae bacterium]) HSP 1 Score: 71.6 bits (174), Expect = 4.800e-9 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = 0 Query: 117 TIAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPL------VVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFD 290 TI+ ++ G L+LG A+P+G I+PL+ + V+ L LP L+ M+ S+ + +T K + I + +SL AG+GEE+ FRG LQ L+Q + PW + +S F +H+ + YF+LA ++ YLG L + NL P+MVH L+D Sbjct: 13 TISIMVEGGLVLG--AYPLGWLLGIHPLSNFVINWHDSWIGMVATLPLLPIFLI----------MIHGSIPFLGKLKTISKDTIRPMMRRCTIPDLLGISLLAGVGEEMVFRGVLQSWLAQ-DSPPWAAVMAASLSFGMMHSMSKSYFVLATLVGAYLGLLFVWTGNLIAPIMVHFLYD 178
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_067560664.1 (CPBP family intramembrane metalloprotease [Halofilum ochraceum]) HSP 1 Score: 71.2 bits (173), Expect = 6.200e-9 Identity = 55/182 (30.22%), Postives = 91/182 (50.00%), Query Frame = 0 Query: 130 LLAFPVG----HFFKINPLATAKAPMGFGPLLAVSALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFVQNHFWGGGKRGKE 308 +LA P+G F +P A G PLLA A+ + + A ++E ++R +E +F +A V++S AG+GEE+ FRG +Q ++ + W GL ++S +F +HA + YF+LA + +YLG L NL +P +VH L+D + + G RG++ Sbjct: 28 VLAIPLGLQPWQAFGASPGLVFAAVAGTVPLLAALAV----SARVGAAWFEDVEALVRPLIESVFRGRG--------VAGVVIVSALAGVGEELLFRGVIQTAMA-ASFGAWPGLVVASVLFGMMHALSRAYFVLATAMGLYLGVLYQATDNLLLPAIVHGLYDAIAI--GYLLLAGDRGRD 194
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_101052892.1 (CPBP family intramembrane metalloprotease [Methylomonas sp. Kb3] >PKD40354.1 CPBP family intramembrane metalloprotease [Methylomonas sp. Kb3]) HSP 1 Score: 70.9 bits (172), Expect = 8.100e-9 Identity = 60/178 (33.71%), Postives = 98/178 (55.06%), Query Frame = 0 Query: 128 LGLLAFPVGHFFKINP---LATAKAPMGFGPLLAVSALLTLPALL--LHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPW---MGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 L +LA +G ++P LA ++A +G G L A LL L + L + ++I D+L E+L G+ A + ++ +L+ AG EE FRG LQP L N W +GL +S+ +FA +HA TP Y +LA+++ +Y+G + + Y NL +P+++H ++D V FV Sbjct: 22 LAVLALALGWLADLDPFASLAFSEAALGIG-LFATGPLLVLFFAMQQLSYPPIQKIRDLLLETL----GARLAYRHWTDLL----ILAAIAGFAEEALFRGFLQPWL----ENGWGASVGLWVSNVLFALVHAVTPLYAVLAMLMGLYMG-VMLDYGGERNLLMPMVIHAVYDFVAFV 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_033157008.1 (CPBP family intramembrane metalloprotease [Methylomonas sp. LW13]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 60/178 (33.71%), Postives = 98/178 (55.06%), Query Frame = 0 Query: 128 LGLLAFPVGHFFKINP---LATAKAPMGFGPLLAVSALLTLPALL--LHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPW---MGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 L +LA +G ++P LA ++A +G G L A LL L + L + ++I ++L E+L G+ A + ++ +L+ AG EE FRG LQP L N W +GL +S+ +FA +HA TP Y +LA+++ +Y+G + + Y NL VP+++H ++D V FV Sbjct: 22 LAVLALALGWLADLDPFASLAFSEAALGIG-LFATGPLLVLFFAMQQLSYPPIQKIRELLLETL----GARLAYRHWTDLL----ILAAIAGFAEEALFRGFLQPWL----ENGWGASVGLWVSNVLFALVHAVTPLYAVLAMLMGLYMG-VMLDYGGERNLLVPMVIHAVYDFVAFV 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_064024292.1 (CPBP family intramembrane metalloprotease [Methylomonas koyamae] >OAI29993.1 abortive infection protein [Methylomonas koyamae]) HSP 1 Score: 70.5 bits (171), Expect = 1.100e-8 Identity = 52/144 (36.11%), Postives = 79/144 (54.86%), Query Frame = 0 Query: 157 LAVSALLTLPALLLHFASGREIE---DMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 +A+ L T+P LLL FA +RE L G+ + + + ++ ++ + AG EE FRG LQP L ++ N +GL S+ +FA +HA TP Y LLA ++ +YLG+L + Y NL PV++H +D V FV Sbjct: 48 VAIGLLATVPLLLLFFALQHLAYPPLQTIRELLLETLGARLSDRHWVDLLVLACI----AGFAEEALFRGFLQPWL-ELRWNAELGLLFSNVVFALVHAVTPLYALLAFLMGLYLGTL-LDYGGERNLLTPVVIHAAYDFVAFV 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_020484173.1 (MULTISPECIES: CPBP family intramembrane metalloprotease [Methylomonas]) HSP 1 Score: 70.1 bits (170), Expect = 1.400e-8 Identity = 59/178 (33.15%), Postives = 97/178 (54.49%), Query Frame = 0 Query: 128 LGLLAFPVGHFFKINPLAT---AKAPMGFGPLLAVSALLTLPALL--LHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPW---MGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 L +LA +G ++P A +++ +G G L A LL L + L + ++I D+L E+L G+ A + ++ +L+ AG EE FRG LQP L N W +GL +S+ +FA +HA TP Y +LA+++ +Y+G + + Y NL VP+++H ++D V FV Sbjct: 22 LAVLALALGWLADLDPFANLEFSESALGIG-LFATGPLLVLFFAMQQLTYPPIQKIRDLLLETL----GARLAYRHWTDLL----ILAAIAGFAEEALFRGFLQPWL----ENGWGASVGLWVSNLLFALVHAVTPLYAVLAMLMGLYMG-VMLDYGGERNLLVPMVIHAVYDFVAFV 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_054759207.1 (CPBP family intramembrane metalloprotease [Methylomonas koyamae] >ATG88352.1 abortive infection protein [Methylomonas koyamae]) HSP 1 Score: 70.1 bits (170), Expect = 1.400e-8 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 0 Query: 157 LAVSALLTLPALLLHFASGREIE---DMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 +A+ L T+P LLL FA +RE L G+ + + A ++L+ AG EE FRG LQP L ++ N +GL S+ +FA +HA TP Y LLA ++ +YLG+L + Y NL PV++H +D V FV Sbjct: 48 VAIGLLATVPLLLLFFALQHLAYPPLQTIRELLLETLGARLSDRH----WADLLVLACIAGFAEEALFRGFLQPWL-ELRWNAELGLLFSNVVFALVHAVTPLYALLAFLMGLYLGTL-LDYGGERNLLTPVVIHAAYDFVAFV 185 The following BLAST results are available for this feature:
BLAST of NO01G04030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04030 ID=NO01G04030|Name=NO01G04030|organism=Nannochloropsis oceanica|type=gene|length=936bpback to top protein sequence of NO01G04030.1 >NO01G04030.1-protein ID=NO01G04030.1-protein|Name=NO01G04030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top Synonyms
Publications
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