NO01G04030, NO01G04030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G04030 vs. NCBI_GenBank
Match: EWM29340.1 (abortive infection protein [Nannochloropsis gaditana]) HSP 1 Score: 341.3 bits (874), Expect = 3.200e-90 Identity = 182/233 (78.11%), Postives = 195/233 (83.69%), Query Frame = 0 Query: 78 RPLFQQQPPAGEELSGPTLSKDMSPIPPPSSSPLSPNYKTIAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFVQNHFWG--GGKRGKEA 309 +PLFQQ+PP E S D IPPP + P SPNYKTIAAL+ GELLLGLLAFP+GH FKINPLATAKA GFGPL AVSALLTLPALLLH SGREIEDMLRESLEGIFGS+TAKK+P VVIAISVLLSLSAGMGEEVAFRGALQPI +Q T P GLGISS IFAALHAATPRYFLLALVLSVYLG LQ+RY NLWVP++VHTLFDVVGF+QNHFWG G K G E+ Sbjct: 68 QPLFQQKPPDSEAPSPEVTPSDQPSIPPP-AIPRSPNYKTIAALVAGELLLGLLAFPLGHVFKINPLATAKAASGFGPLAAVSALLTLPALLLHLTSGREIEDMLRESLEGIFGSDTAKKRPAVVIAISVLLSLSAGMGEEVAFRGALQPIFAQATGQPMWGLGISSLIFAALHAATPRYFLLALVLSVYLGCLQLRYCNLWVPILVHTLFDVVGFMQNHFWGHWGRKTGGES 299
BLAST of NO01G04030 vs. NCBI_GenBank
Match: EJK73636.1 (hypothetical protein THAOC_04730 [Thalassiosira oceanica]) HSP 1 Score: 80.1 bits (196), Expect = 1.300e-11 Identity = 67/222 (30.18%), Postives = 104/222 (46.85%), Query Frame = 0 Query: 86 PAGEELSGPT-LSKDMSPIPPPSSSPLSPNYKTIAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALLTL-----PALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFVQNHFWGG 302 PA E+ GPT L D++ I ++ I L G+ + +G F +NP A + PL ++ ++ + PAL + + ++ + G K++ +A S+LL L AG+GEE+ FRG Q +LS + L IS +F LHA TP Y LLA SV+ G + I NL +P++ HT++DV + H W G Sbjct: 143 PASREVDGPTSLRSDVTNI----LRLVATQGLLIPLSLALARAFGVANYGLGAGFSVNPAAILQGLQYCVPLFGLAGIMRVIEPYSPAL-------QGVTKATERTVLFVMGK---KRRLGFALAFSILLGLCAGVGEELLFRGVFQTLLSTKLGSSNSALCISGVVFGLLHAVTPLYALLAGAASVFFGYIYITTGNLAIPMVAHTIYDVGALIWAH-WDG 349
BLAST of NO01G04030 vs. NCBI_GenBank
Match: CBN80000.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.4 bits (189), Expect = 8.700e-11 Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 141 INPLATAKAPMGFGPLLAVSALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGL-GISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFVQNH 298 ++P ATA G PLL LL + R+I++ E +FGS K+Q V + + LS+ G+ EE AFRG L IL+ T P + G+S+ IF +LHAAT YFL A + ++ L + N++VP++ H ++D + V+ H Sbjct: 218 VSPAATALGVAGMVPLLGYGLLLD---RWTEWEWVRKIDEATSEVALQLFGS---KRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVGLSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYH 369
BLAST of NO01G04030 vs. NCBI_GenBank
Match: XP_002182295.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46196.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.4 bits (189), Expect = 8.700e-11 Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 0 Query: 152 GFGPLLAVSA-------LLTLP----ALLLHFASGR--EIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFVQNHF 299 GFGP + LL LP A L R ++D+ + + I +PL ++ L L+AG GEE+ FRG LQ L+ P + +G +S +F ALHA TP Y LA + SVY G++ + + NL VP+ HT++DV H+ Sbjct: 136 GFGPNIVFDLKSIGGGFLLALPLGGLAAALDLIEDRFPALQDVTKATQRSILALMGGTFKPLFAFFTALALGLAAGFGEEMLFRGILQYELAN-RFGPVLAVGAASIVFGALHAVTPLYAFLATLASVYFGAIYLAFDNLAVPIWCHTIYDVGALYYAHW 294
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_066982225.1 (CPBP family intramembrane metalloprotease [Methylomonas lenta] >OAI15396.1 abortive infection protein [Methylomonas lenta]) HSP 1 Score: 77.4 bits (189), Expect = 8.700e-11 Identity = 64/192 (33.33%), Postives = 97/192 (50.52%), Query Frame = 0 Query: 107 SSSPLSPNYKTIAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFG-PLLAVSALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 +++PL N+ +A E L LA +G +NP A +GF L LLTLP +L+ FA +E+ + + + + ++L+ AG EEV FRG LQP L VT GL IS+ +FA +HA TP Y +LAL++ +YLG + + Y NL P+++H +D + FV Sbjct: 3 NTAPLPDNFFRMACYF--EAALTFLAILLGWLMDVNPFAY----LGFDEQALVYGILLTLPLVLIFFAM-QELPFAGLQKIRALLLETLGARLYRCHWTDLLILAAIAGFSEEVLFRGTLQPWLENVTGMT-AGLLISNVLFALVHAVTPLYAVLALLMGLYLG-MSLDYGAERNLLTPIVIHGFYDFIAFV 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_098062310.1 (CPBP family intramembrane metalloprotease [Longimonas halophila] >PEN06784.1 CPBP family intramembrane metalloprotease [Longimonas halophila]) HSP 1 Score: 76.6 bits (187), Expect = 1.500e-10 Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0 Query: 208 LLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFV 295 LL+++AG+GEE+ FRG LQ L+ + PW L ++S +F H TP Y ++A ++ YLG L L VPV+VHTL+D V FV Sbjct: 123 LLAIAAGVGEELLFRGVLQAELAMLW-EPWSALVVASIVFGLCHWITPAYAIIATIMGAYLGGLYWYTGGLLVPVLVHTLYDFVAFV 208
BLAST of NO01G04030 vs. NCBI_GenBank
Match: PPD29536.1 (CPBP family intramembrane metalloprotease [Methylomonas sp.]) HSP 1 Score: 76.3 bits (186), Expect = 1.900e-10 Identity = 67/192 (34.90%), Postives = 99/192 (51.56%), Query Frame = 0 Query: 107 SSSPLSPNYKTIAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVS-ALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRY---ANLWVPVMVHTLFDVVGFV 295 +S P++ + +A E L LLA VG I+P + F V+ LLTLP LLL F S +E+ + + + ++L++ AG EEV FRGALQP L VT GL IS+ IFA +HA TP Y LLA+++ +YLG + + Y NL P+++H+L+D + F+ Sbjct: 3 NSPPVTNTFFRVACYF--EAALTLLAIGVGWLTGIDPF----EDLIFNERAFVNGVLLTLPLLLLFF-SMQELPIQALAKIRQLLLETLGARLYQCHWTDLLILAVIAGFSEEVLFRGALQPWLENVTGIT-NGLLISNLIFALVHAVTPLYALLAMLMGLYLG-MSLDYDTERNLLTPIVIHSLYDFIAFI 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_013817118.1 (CPBP family intramembrane metalloprotease [Methylomonas methanica] >AEF98845.1 Abortive infection protein [Methylomonas methanica MC09]) HSP 1 Score: 75.9 bits (185), Expect = 2.500e-10 Identity = 63/192 (32.81%), Postives = 93/192 (48.44%), Query Frame = 0 Query: 106 PSSSPLSPNYKTIAALLGGELLLGLLAFPVGHFFKINPLATAKAPMGFGPLLAVSALLTLPALLLHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 P S+PL+ N+ +A E L L+A +G I+P A L LLTLP LLL F + I E + + + ++L+ AG EEV FRGALQP L GL +S+ +FA +HA TP Y LLA+++ +YLG + + Y NL P+++H +D + F+ Sbjct: 2 PQSAPLASNFYRVACYF--EAALTLVALVLGWLVDIDPFADLALD---EQALLHGLLLTLPLLLLFFGM-QAIPLKALEKIRALLLETLGPRLYRCHWTDLLILAAIAGFSEEVLFRGALQPWLENALGMT-AGLWVSNALFALVHAVTPLYALLAMLMGLYLG-MSLDYGGERNLLTPIVIHGFYDFIAFL 185
BLAST of NO01G04030 vs. NCBI_GenBank
Match: OEU09927.1 (Abi-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 73.9 bits (180), Expect = 9.600e-10 Identity = 56/185 (30.27%), Postives = 91/185 (49.19%), Query Frame = 0 Query: 121 LLGGELLLGLLAFPVGHFFKINPLATAKAPMGFG-PLLAVSALLTLPALLLHFA------SGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPWMGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYANLWVPVMVHTLFDVVGFVQNHF 299 L+GG+ LL +A V F P + FG P + + L +LP L A ++D+ + + + +P++ ++ L ++AG+GEE+ FRG LQ L + ++ +GI+S IF ALHA TP Y LA + SVY G L + NL +P++ H +D + H+ Sbjct: 1 LVGGQSLLIGVAIIVAKFCG-TPNLGLGPNIDFGLPSIGLGILWSLPLGALGVALDVVEDKFPALQDVTKATQSSVLSLLGGTFRPIIGTITALALGVAAGLGEEMLFRGVLQNELGIRIGSDYIAVGIASIIFGALHAVTPLYAGLAGLASVYFGWLYLATGNLAIPIVTHAFYDWAALLYAHW 184
BLAST of NO01G04030 vs. NCBI_GenBank
Match: WP_064038235.1 (CPBP family intramembrane metalloprotease [Methylomonas methanica] >OAH99148.1 abortive infection protein [Methylomonas methanica]) HSP 1 Score: 72.8 bits (177), Expect = 2.100e-9 Identity = 60/178 (33.71%), Postives = 100/178 (56.18%), Query Frame = 0 Query: 128 LGLLAFPVGHFFKINPLAT---AKAPMGFGPLLAVSALLTLPALL--LHFASGREIEDMLRESLEGIFGSETAKKQPLVVIAISVLLSLSAGMGEEVAFRGALQPILSQVTNNPW---MGLGISSFIFAALHAATPRYFLLALVLSVYLGSLQIRYA---NLWVPVMVHTLFDVVGFV 295 L +LA +G ++P A+ +++ +G G LLA + LL L + L + ++I D+L E+L G+ A + ++ +L+ AG EE FRG LQP L N W +GL +S+ +FA +HA TP Y +LA+++ +Y+G + + Y NL VP+++H ++D V FV Sbjct: 22 LAVLALALGWLADLDPFASLEFSESALGIG-LLATAPLLVLFFAMQQLSYPPIQKIRDLLLETL----GARLAYRHWTDLL----ILAAIAGFAEEALFRGFLQPWL----ENGWGASVGLWVSNLLFALVHAVTPLYAVLAMLMGLYMG-VMLDYGGERNLLVPMVIHAVYDFVAFV 185 The following BLAST results are available for this feature:
BLAST of NO01G04030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G04030 ID=NO01G04030|Name=NO01G04030|organism=Nannochloropsis oceanica|type=gene|length=936bpback to top protein sequence of NO01G04030.1 >NO01G04030.1-protein ID=NO01G04030.1-protein|Name=NO01G04030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=312bpback to top Synonyms
Publications
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